SIENTIAPDE-1110
Update dependencies and enhance logging in activities; bump version in requirements and values.yaml
This commit is contained in:
@@ -3,11 +3,11 @@ from temporalio import activity, workflow
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with workflow.unsafe.imports_passed_through():
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from sientia_do.temporal.activities.postgres import Postgres
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from sientia_do.notifications.handlers import NotificationHandler
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from sientia_do.temporal.utils.logger import Logger
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from laborious.activities.mlflow import MLFlow
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from laborious.activities.gates import Gates
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from laborious.activities.opc import OPC
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from typing import Any
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from logging import Logger
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class Activities(Postgres, MLFlow, Gates, OPC):
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@@ -44,10 +44,6 @@ class Activities(Postgres, MLFlow, Gates, OPC):
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logger=logger,
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notification_handler=notification_handler)
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@activity.defn(name="prepare_activity")
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async def prepare_activity(self, input_data: dict[str, Any]):
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await super().prepare_activity(input_data)
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def shutdown(self):
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Postgres.close(self)
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OPC.shutdown(self)
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@@ -3,10 +3,10 @@ from temporalio import activity, workflow
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with workflow.unsafe.imports_passed_through():
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import traceback
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from logging import Logger
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from sientia_do.notifications.handlers import NotificationHandler
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from sientia_do.notifications.models import NotificationLevel
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from sientia_do.temporal.activities.base import BaseActivity
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from sientia_do.temporal.utils.logger import Logger
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from laborious.utils.filters.mlflow_filters import nan_values_filter, api_error_filter
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from typing import Any
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from laborious.utils.filters.conditional_filters import (
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@@ -65,7 +65,11 @@ class Gates(BaseActivity):
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list and filter configuration and functions.
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"""
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self.logger.debug("Performing input gate...")
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metadata = input_data['metadata']
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self.debug("Performing input gate...", metadata)
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self.debug(f"Input data: {input_data}", metadata)
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filters = input_data['filters']
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data = DataFrame(input_data['data'])
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@@ -73,17 +77,17 @@ class Gates(BaseActivity):
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filter_output = []
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self.logger.debug(f"Input data:\n {data}")
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self.logger.debug(f"Filters: {filters}")
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self.debug(f"Input data:\n {data}", metadata)
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self.debug(f"Filters: {filters}", metadata)
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for fil, config in filters.items():
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if fil not in input_filter_functions:
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self.logger.error(f"Filter {fil} not found")
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self.error(f"Filter {fil} not found", metadata)
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continue
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try:
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if input_filter_functions[fil](data, config['config']):
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self.logger.debug(
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f"Data not passed the input filter {fil}:{config}")
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self.debug(
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f"Data not passed the input filter {fil}:{config}", metadata)
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filter_output.append(config['policy'])
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except Exception as e:
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trace = traceback.format_exc()
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@@ -97,11 +101,11 @@ class Gates(BaseActivity):
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for path_flag in path_priority:
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if path_flag in filter_output:
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self.logger.debug(f"Input gate result: {path_flag}")
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self.debug(f"Input gate result: {path_flag}", metadata)
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return path_flag, input_filter_functions['path_confidence'][path_flag], \
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"Input data with bad quality"
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self.logger.debug("Nothing was filtered by the input gate")
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self.debug("Nothing was filtered by the input gate", metadata)
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return None, 0, ""
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@activity.defn(name="mlflow_response_gate")
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@@ -121,7 +125,8 @@ class Gates(BaseActivity):
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and filter configuration and functions.
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"""
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self.logger.debug("Performing mlflow response gate...")
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metadata = input_data['metadata']
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self.debug("Performing mlflow response gate...", metadata)
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filters = input_data['filters']
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data = input_data['data']
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@@ -130,8 +135,8 @@ class Gates(BaseActivity):
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filter_output = []
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self.logger.debug(f"Input data:\n {data}")
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self.logger.debug(f"Filters: {filters}")
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self.debug(f"Input data:\n {data}", metadata)
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self.debug(f"Filters: {filters}", metadata)
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comments = []
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for fil, config in filters.items():
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@@ -160,11 +165,12 @@ class Gates(BaseActivity):
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for path_flag in path_priority:
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if path_flag in filter_output:
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self.logger.debug(f"Mlflow response gate result: {path_flag}")
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self.debug(
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f"Mlflow response gate result: {path_flag}", metadata)
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return path_flag, mlflow_response_filter_functions['path_confidence'][path_flag], \
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", ".join(comments)
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self.logger.debug("Nothing was filtered by the mlflow response gate")
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self.debug("Nothing was filtered by the mlflow response gate", metadata)
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return None, 0, ""
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@activity.defn(name="mlflow_content_gate")
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@@ -184,7 +190,8 @@ class Gates(BaseActivity):
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list and filter configuration and functions.
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"""
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self.logger.debug("Performing mlflow content gate...")
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metadata = input_data['metadata']
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self.debug("Performing mlflow content gate...", metadata)
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filters = input_data['filters']
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data = DataFrame(input_data['data'])
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@@ -193,8 +200,8 @@ class Gates(BaseActivity):
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filter_output = []
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self.logger.debug(f"Input data:\n {data}")
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self.logger.debug(f"Filters: {filters}")
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self.debug(f"Input data:\n {data}", metadata)
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self.debug(f"Filters: {filters}", metadata)
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for fil, config in filters.items():
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if fil not in mlflow_content_filter_functions:
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@@ -221,11 +228,12 @@ class Gates(BaseActivity):
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for path_flag in path_priority:
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if path_flag in filter_output:
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self.logger.debug(f"Mlflow content gate result: {path_flag}")
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self.debug(
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f"Mlflow content gate result: {path_flag}", metadata)
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return path_flag, mlflow_content_filter_functions['path_confidence'][path_flag], \
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"Transformed data not passed the content filter"
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self.logger.debug("Nothing was filtered by the mlflow content gate")
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self.debug("Nothing was filtered by the mlflow content gate", metadata)
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return None, 0, ""
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@activity.defn(name="format_prediction")
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@@ -241,7 +249,8 @@ class Gates(BaseActivity):
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Returns:
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dict: The formatted data.
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"""
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self.logger.debug("Formatting prediction...")
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metadata = input_data['metadata']
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self.debug("Formatting prediction...", metadata)
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data = DataFrame(input_data['data'])
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data['timestamp'] = input_data['timestamp']
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@@ -269,7 +278,8 @@ class Gates(BaseActivity):
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dict: The formatted data.
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"""
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self.logger.debug("Formatting default prediction...")
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metadata = input_data['metadata']
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self.debug("Formatting default prediction...", metadata)
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return DataFrame({
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'prediction': [0],
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@@ -6,9 +6,9 @@ from temporalio import activity, workflow
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with workflow.unsafe.imports_passed_through():
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from sientia_do.temporal.activities.base import BaseActivity
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from sientia_do.notifications.handlers import NotificationHandler
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from sientia_do.temporal.utils.logger import Logger
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from laborious.utils.repository.model_repository import MLFlowRepository
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from typing import Any
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from logging import Logger
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class MLFlow(BaseActivity):
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@@ -36,13 +36,14 @@ class MLFlow(BaseActivity):
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Returns:
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dict[str, Any]: The transformed data.
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"""
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self.logger.info('Transforming data...')
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metadata = input_data['metadata']
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self.debug('Transforming data...', metadata)
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data = DataFrame(input_data['data'])
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model_name = input_data['model_name']
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model_retention = input_data['model_retention']
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self.logger.debug("Raw input data:")
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self.logger.debug(data)
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self.debug("Raw input data:", metadata)
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self.debug(data, metadata)
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# Sort by created_at in descending order and keep first occurrence of each variable/timestamp pair
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data = data.sort_values('created_at', ascending=False).drop_duplicates(
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@@ -56,14 +57,14 @@ class MLFlow(BaseActivity):
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data.reset_index(inplace=True)
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data.columns.name = None
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self.logger.debug("Processed input data:")
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self.logger.debug(data)
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self.debug("Processed input data:", metadata)
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self.debug(data, metadata)
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response_data = self.model_monitoring_repository.transform(
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model_name, data, model_retention)
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self.logger.debug("Response data:")
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self.logger.debug(response_data)
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self.debug("Response data:", metadata)
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self.debug(response_data, metadata)
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return response_data
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@@ -79,18 +80,19 @@ class MLFlow(BaseActivity):
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Returns:
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dict[str, Any]: The predicted data.
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"""
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self.logger.info('Predicting data...')
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metadata = input_data['metadata']
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self.debug('Predicting data...', metadata)
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data = DataFrame(input_data['data'])
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model_name = input_data['model_name']
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model_retention = input_data['model_retention']
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self.logger.debug(data)
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self.debug(data, metadata)
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data.replace(np.nan, None, inplace=True)
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response_data = self.model_monitoring_repository.predict(
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model_name, data, model_retention)
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self.logger.debug(response_data)
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self.debug(response_data, metadata)
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return response_data
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@@ -2,10 +2,10 @@ from temporalio import activity, workflow
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with workflow.unsafe.imports_passed_through():
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from logging import Logger
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from sientia_do.notifications.handlers import NotificationHandler
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from sientia_do.notifications.models import NotificationLevel
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from sientia_do.temporal.activities.base import BaseActivity
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from sientia_do.temporal.utils.logger import Logger
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from laborious.utils.repository.opc_repository import OpcRepository
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from typing import Any
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import traceback
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@@ -89,16 +89,17 @@ class OPC(BaseActivity):
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- dict[Any, Any]: The data that was written to the OPC servers.
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"""
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self.logger.debug("Writing data to OPC servers...")
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metadata = input_data['metadata']
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self.debug("Writing data to OPC servers...", metadata)
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data = DataFrame(input_data['data'])
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opc_output_config = input_data['opc_output_config']
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self.logger.debug(data)
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self.debug(data, metadata)
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success = True
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for server, config in opc_output_config.items():
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if self.opc_repository.get(server) is None:
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self.logger.error(f"OPC server {server} not found")
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self.error(f"OPC server {server} not found", metadata)
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continue
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if 'prediction_tags' in config:
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@@ -137,15 +138,17 @@ class OPC(BaseActivity):
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Returns:
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dict[Any, Any]: The processed data as a dictionary.
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"""
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metadata = data['metadata']
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if not success:
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data['prediction_confidence'] = OPC_WRITTING_ERROR_CONFIDENCE
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self.logger.debug(
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self.debug(
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"Some data could not be written to OPC servers, setting confidence to "
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f"{OPC_WRITTING_ERROR_CONFIDENCE}."
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)
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else:
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self.logger.info("Data written to OPC servers successfully.")
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self.debug("Data written to OPC servers successfully.", metadata)
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return data.to_dict()
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