Add laborious
This commit is contained in:
0
laborious/__init__.py
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0
laborious/__init__.py
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0
laborious/activities/__init__.py
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laborious/activities/__init__.py
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212
laborious/activities/activities.py
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laborious/activities/activities.py
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from sientia_do.observability.metrics_controller import MetricsController
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from temporalio import workflow
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with workflow.unsafe.imports_passed_through():
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from typing import Any
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from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
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from sientia_do.observability.logger import Logger
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from sientia_do.repository.minio_repository import MinioRepository
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from sientia_do.repository.mongodb_repository import MongoDBRepository
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from laborious.activities.api import API
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from laborious.activities.gates import Gates
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from laborious.activities.mlflow import MLFlow
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from laborious.activities.model_import import ModelImport
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from laborious.activities.model_metrics import ModelMetrics
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from laborious.activities.opc import OPC
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from laborious.activities.storage import Storage
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from laborious.utils.connectors_config import (
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build_import_config,
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build_import_status_config,
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)
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class Activities(Storage, MLFlow, Gates, OPC, ModelMetrics, API, ModelImport):
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"""
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Main activities orchestrator for the Laborious system.
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This class combines functionality from multiple activity classes to provide
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a unified interface for all workflow operations. It manages database connections,
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MLFlow model interactions, data quality validation, and OPC server communications.
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The class implements multiple inheritance to combine specialized functionality:
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- Storage: Database operations and data persistence
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- MLFlow: Model inference and transformation operations
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- Gates: Data quality validation and filtering mechanisms
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- OPC: Real-time data export to OPC servers
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- ModelMetrics: Model performance metrics and drift detection
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- API: PI Web API export operations for industrial systems
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Attributes:
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postgres_config (dict): PostgreSQL connection configuration
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mlflow_config (dict): MLFlow server configuration
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opc_config (dict): OPC server configuration
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pi_web_api_config (dict): PI Web API server configuration
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logger (Logger): Logging and observability instance
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notification_handler (NotificationHandler): Notification management instance
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"""
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def __init__(
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self,
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postgres_config: dict[str, Any],
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mlflow_config: dict[str, Any],
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minio_config: dict[str, Any],
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opc_config: dict[str, Any],
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pi_web_api_config: dict[str, Any],
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logger: Logger,
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notification_handler: NotificationHandler,
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mongo_config: dict[str, Any] | None = None,
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import_config: dict[str, Any] | None = None,
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import_status_config: dict[str, Any] | None = None,
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):
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"""
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Initialize the Activities orchestrator with all required configurations.
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This constructor initializes all parent classes with their respective
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configurations and sets up the foundation for all activity operations.
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Args:
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postgres_config: PostgreSQL connection configuration dictionary
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Required keys: host, port, user, password, dbname, min_connections, max_connections
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mlflow_config: MLFlow server configuration dictionary
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Required keys: host, port, username, password
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opc_config: OPC server configuration dictionary
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Can contain multiple server configurations
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pi_web_api_config: PI Web API server configuration dictionary
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Required keys: base_url, auth_type, auth_token
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logger: Logger instance for observability and debugging
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notification_handler: Notification handler for alerts and monitoring
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mongo_config: MongoDB configuration for the model listing the import writes. When
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absent, the import activities that need it refuse rather than guess — the
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notification handler keeps its own client either way.
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import_config: `build_import_config()`; read from the environment when absent
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import_status_config: `build_import_status_config()`; read from the environment when
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absent. This is the BFF database holding the import log, a second Postgres
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connection that is never the one Storage holds.
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Raises:
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Exception: If any parent class initialization fails
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"""
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metrics_controller = MetricsController(logger=logger)
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minio_repository = MinioRepository(
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endpoint=minio_config['endpoint_url'],
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access_key=minio_config['access_key'],
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secret_key=minio_config['secret_key'],
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bucket=minio_config['default_bucket'],
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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secure=minio_config['secure'],
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)
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# Initialize parent classes
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Storage.__init__(
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self,
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host=postgres_config['host'],
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port=postgres_config['port'],
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user=postgres_config['user'],
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password=postgres_config['password'],
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dbname=postgres_config['dbname'],
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min_connections=postgres_config['min_connections'],
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max_connections=postgres_config['max_connections'],
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retention_hours=minio_config['retention_hours'],
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minio_repository=minio_repository,
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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MLFlow.__init__(
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self,
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mlflow_host=mlflow_config['host'],
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mlflow_port=mlflow_config['port'],
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mlflow_username=mlflow_config['username'],
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mlflow_password=mlflow_config['password'],
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minio_repository=minio_repository,
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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Gates.__init__(
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self,
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minio_repository=minio_repository,
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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OPC.__init__(
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self,
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opc_servers=opc_config,
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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ModelMetrics.__init__(
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self,
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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API.__init__(
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self,
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base_url=pi_web_api_config['base_url'],
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auth_type=pi_web_api_config['auth_type'],
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auth_token=pi_web_api_config['auth_token'],
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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mongo_repository = (
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MongoDBRepository(
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connection_string=mongo_config['connection_string'],
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database_name=mongo_config['database_name'],
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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if mongo_config
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else None
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)
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ModelImport.__init__(
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self,
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status_config=import_status_config or build_import_status_config(),
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import_config=import_config or build_import_config(),
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minio_repository=minio_repository,
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# The MLflow repository is shared rather than rebuilt: setting the tracking URI is a
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# process-wide side effect, so two instances would be two chances to disagree.
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mlflow_repository=self.model_monitoring_repository,
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mongo_repository=mongo_repository,
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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)
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async def shutdown(self):
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"""
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Gracefully shutdown all activities and clean up resources.
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This method ensures proper cleanup of all resources including:
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- PostgreSQL connection pools
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- OPC server connections
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- PI Web API client connections
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- MLFlow model repositories
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- Any other resources that need explicit cleanup
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The method should be called before the application terminates to ensure
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proper resource cleanup and prevent resource leaks.
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"""
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Storage.close(self)
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MLFlow.close(self)
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Gates.close(self)
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await OPC.aclose(self)
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ModelMetrics.close(self)
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API.close(self)
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ModelImport.close(self)
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305
laborious/activities/api.py
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305
laborious/activities/api.py
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@@ -0,0 +1,305 @@
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from temporalio import activity, workflow
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with workflow.unsafe.imports_passed_through():
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import json
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import traceback
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from typing import Any
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from pandas import DataFrame
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from sientia_do.notifications.handlers import NotificationHandler
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from sientia_do.notifications.models import NotificationLevel
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from sientia_do.observability.logger import Logger
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from sientia_do.observability.metrics_controller import MetricsController
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from sientia_do.observability.sientia_monitoring import SientiaMonitoring
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from sientia_do.repository.pi_web_api_client import PIWebAPIClient
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from laborious import metrics
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PI_WEB_API_PREDICTION_ERROR_CONFIDENCE = 13
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class API(SientiaMonitoring):
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"""
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PI Web API operations for writing prediction data to PI Web API.
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This class provides Temporal activities for interacting with the PI Web API
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to write prediction and confidence values to industrial systems. It handles
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error scenarios gracefully by setting error confidence values and sending
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notifications when write operations fail.
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The class implements comprehensive error handling for both prediction and
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confidence value writes, ensuring that partial failures are properly
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reported and handled.
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"""
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def __init__(
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self,
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base_url: str,
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auth_type: str,
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auth_token: str,
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logger: Logger,
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notification_handler: NotificationHandler,
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metrics_controller: MetricsController,
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) -> None:
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"""
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Initialize API activity with PI Web API client.
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Args:
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base_url (str): Base URL of the PI Web API server
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auth_type (str): Authentication type ('basic' or 'bearer')
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auth_token (str): Authentication token
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logger (Logger): Logger instance for operation logging
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notification_handler (NotificationHandler): Handler for system notifications
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metrics_controller (MetricsController): Controller for metrics collection
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"""
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SientiaMonitoring.__init__(self, logger, notification_handler, metrics_controller)
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self.pi_web_api_client = PIWebAPIClient(
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base_url=base_url,
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auth_config={
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'type': auth_type,
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'token': auth_token,
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},
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logger=logger,
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notification_handler=notification_handler,
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metrics_controller=metrics_controller,
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headers_config={
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'Content-Type': 'application/json',
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'Accept': 'application/json',
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'x-requested-with': 'piwebapistreams',
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'User-Agent': 'Aig-Laborious-Agent/1.0',
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},
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)
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def get_pi_web_api_core_labels(
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self,
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metadata: dict[str, Any],
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operation_type: str = 'write_pi_web_api_data',
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) -> dict[str, Any]:
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"""
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Generate core labels for PI Web API metrics.
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PI Web API metrics in laborious use the shared ``CORE_LABELS`` from
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``sientia_do``, which includes ``operation_type``. For this reason,
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operation_type must always be present in emitted labels.
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Args:
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- metadata (dict[str, Any]): Workflow execution metadata used to derive labels.
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- operation_type (str): Operation type label for metric cardinality.
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Return:
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dict[str, Any]: Core labels dictionary including operation_type.
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"""
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return super().get_core_labels(
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metadata=metadata,
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operation_type=operation_type,
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)
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def close(self) -> None:
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"""
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Close the PI Web API client and shutdown monitoring services.
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This method properly closes all connections and resources associated
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with the PI Web API client and monitoring services.
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"""
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self.pi_web_api_client.close()
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SientiaMonitoring.shutdown(self)
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async def process_pi_web_api_response(
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self,
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response_data: list[dict[str, Any]],
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tags: dict[str, str],
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core_labels: dict[str, str],
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metadata: dict[str, Any],
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) -> tuple[int, str]:
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"""
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Process the response data from PI Web API write operation.
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Validates that all tags were successfully written, emits metrics for each tag
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(success or error), and returns the appropriate prediction confidence value.
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Sets error confidence if any tag write fails or if the number of written tags
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doesn't match the expected count.
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Args:
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- response_data (dict[str, Any]): The response data from the PI Web API write operation.
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- tags (dict[str, str]): The tags that were written to the PI Web API.
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- core_labels (dict[str, str]): The core labels of the workflow execution.
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- metadata (dict[str, Any]): The metadata of the workflow execution.
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Returns:
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int: Prediction confidence value (0 for success, 13 for errors)
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"""
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# Convert tags from name:webid to webid:name
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tags = {w: t for t, w in tags.items()}
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tag_names = list[str](tags.values())
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confidence = 0
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message = ''
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# Evaluate response for each tag
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written_tags = []
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for item in response_data:
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web_id = item.get('WebId')
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if not web_id:
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self.error('The response did not contain some WebIds', metadata)
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continue
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errors = item.get('Errors', [])
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tag_name = tags.get(web_id)
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if not tag_name:
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self.error(
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f'The response did not contain the tag name for WebId {web_id}', metadata
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)
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continue
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if errors:
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self.error(
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f'Error writing tag {tag_name}:{web_id} to PI Web API: {errors}', metadata
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)
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await self.emit_metric(
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metric_object=metrics.PI_WEB_API_PREDICTION_WRITTEN_ERROR_COUNT,
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tags={
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**core_labels,
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'tag_name': tag_name,
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},
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)
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confidence = PI_WEB_API_PREDICTION_ERROR_CONFIDENCE
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else:
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await self.emit_metric(
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metric_object=metrics.PI_WEB_API_PREDICTION_WRITTEN_COUNT,
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tags={
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**core_labels,
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'tag_name': tag_name,
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},
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)
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written_tags.append(tag_name)
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if len(written_tags) != len(tag_names):
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message = f'The number of written tags does not match the number of tag names: Expected {tag_names} tags, but {written_tags} tags were written.'
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self.error(
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f'{message}\nResponse:\n {json.dumps(response_data, indent=4)}\nTags:\n {json.dumps(tags, indent=4)}',
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metadata,
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)
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await self.send_notification_async(
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metadata=metadata,
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notification_id='WRITE_PI_WEB_API_PREDICTION_ERROR',
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message=f'The number of written tags does not match the number of tag names: Expected {tag_names} tags, but {written_tags} tags were written.\nResponse:\n {json.dumps(response_data, indent=4)}\nTags:\n {json.dumps(tags, indent=4)}',
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block='write_pi_web_api_data',
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level=NotificationLevel.ERROR,
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)
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confidence = PI_WEB_API_PREDICTION_ERROR_CONFIDENCE
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return confidence, message
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@activity.defn(name='write_pi_web_api_data')
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async def write_pi_web_api_data(self, input_data: dict[str, Any]) -> dict[Any, Any]:
|
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"""
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Write prediction and confidence data to PI Web API.
|
||||
|
||||
Writes prediction values and confidence scores to PI Web API using configured
|
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web IDs. Processes responses to validate writes and emit metrics. Handles errors
|
||||
gracefully by setting error confidence values when writes fail and sending
|
||||
notifications for both prediction and confidence write errors.
|
||||
|
||||
Args:
|
||||
input_data (dict[str, Any]): The input data containing:
|
||||
- metadata (dict[str, Any]): Workflow execution metadata
|
||||
- pi_web_api_output_config (dict[str, Any]): PI Web API configuration with:
|
||||
- endpoint (str): PI Web API endpoint URL
|
||||
- prediction_tags (dict[str, str]): Mapping of tag names to web IDs for predictions
|
||||
- confidence_tags (dict[str, str]): Mapping of tag names to web IDs for confidence
|
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- data (dict[str, Any]): Prediction data, its a dataframe converted to dict.
|
||||
Returns:
|
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dict[Any, Any]: Data dictionary with potentially modified confidence values
|
||||
If prediction write fails, prediction_confidence is set to error value (13)
|
||||
"""
|
||||
metadata = input_data['metadata']
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data = DataFrame(input_data['data'])
|
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pi_web_api_output_config = input_data['pi_web_api_output_config']
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||||
|
||||
self.info(f'Writing data to PI Web API... config: {pi_web_api_output_config}', metadata)
|
||||
|
||||
raw_prediction_tags = pi_web_api_output_config['prediction_tags']
|
||||
raw_confidence_tags = pi_web_api_output_config['confidence_tags']
|
||||
prediction_tags = list[str](raw_prediction_tags.values())
|
||||
confidence_tags = list(raw_confidence_tags.values())
|
||||
|
||||
core_labels = self.get_pi_web_api_core_labels(metadata)
|
||||
|
||||
prediction_value = data.head(1)['prediction'].values[0]
|
||||
confidence_value = data.head(1)['prediction_confidence'].values[0]
|
||||
|
||||
try:
|
||||
prediction_response = await self.pi_web_api_client.write_value(
|
||||
web_ids=prediction_tags,
|
||||
value={
|
||||
'Timestamp': data.head(1)['timestamp'].values[0],
|
||||
'Value': prediction_value,
|
||||
},
|
||||
metadata=metadata,
|
||||
)
|
||||
|
||||
confidence, message = await self.process_pi_web_api_response(
|
||||
response_data=prediction_response,
|
||||
tags=raw_prediction_tags,
|
||||
core_labels=core_labels,
|
||||
metadata=metadata,
|
||||
)
|
||||
|
||||
# Preserve incoming confidence/comments on successful PI writes.
|
||||
# Only downgrade confidence or override comments when PI response
|
||||
# explicitly reports a problem (e.g. partial write mismatch).
|
||||
if confidence != 0:
|
||||
data['prediction_confidence'] = confidence
|
||||
if message:
|
||||
data['comments'] = message
|
||||
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='WRITE_PI_WEB_API_PREDICTION_ERROR',
|
||||
message=f'Error writing prediction data to PI Web API: {e}\n Tags: {raw_prediction_tags}',
|
||||
block='write_pi_web_api_data',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
self.error(trace, metadata)
|
||||
|
||||
data['prediction_confidence'] = PI_WEB_API_PREDICTION_ERROR_CONFIDENCE
|
||||
data['comments'] = str(e)
|
||||
|
||||
return data.to_dict()
|
||||
|
||||
try:
|
||||
confidence_response = await self.pi_web_api_client.write_value(
|
||||
web_ids=confidence_tags,
|
||||
value={
|
||||
'Timestamp': data.head(1)['timestamp'].values[0],
|
||||
'Value': float(confidence_value),
|
||||
},
|
||||
metadata=metadata,
|
||||
)
|
||||
|
||||
await self.process_pi_web_api_response(
|
||||
response_data=confidence_response,
|
||||
tags=raw_confidence_tags,
|
||||
core_labels=core_labels,
|
||||
metadata=metadata,
|
||||
)
|
||||
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='WRITE_PI_WEB_API_CONFIDENCE_ERROR',
|
||||
message=f'Error writing confidence data to PI Web API: {e}\n Tags: {raw_confidence_tags}',
|
||||
block='write_pi_web_api_data',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
return data.to_dict()
|
||||
804
laborious/activities/gates.py
Normal file
804
laborious/activities/gates.py
Normal file
@@ -0,0 +1,804 @@
|
||||
from sientia_do.repository.minio_repository import MinioRepository
|
||||
from temporalio import activity, workflow
|
||||
|
||||
from laborious.utils.repository.minio_manager import MinioManager
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
import traceback
|
||||
from collections.abc import Callable, Mapping
|
||||
from typing import Any
|
||||
|
||||
from pandas import DataFrame
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.notifications.models import NotificationLevel
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.utils.formatters import create_sample_dict
|
||||
|
||||
from laborious import metrics
|
||||
from laborious.utils.dataframe_debug import build_dataframe_debug_message
|
||||
from laborious.utils.filters.conditional_filters import (
|
||||
filter_empty_data,
|
||||
filter_specific_variables_null_values,
|
||||
)
|
||||
from laborious.utils.filters.mlflow_filters import api_error_filter, nan_values_filter
|
||||
from laborious.utils.models.minio_dataframe_payload import MinioDataFramePayload
|
||||
|
||||
# Strongly-typed filter function signatures
|
||||
InputFilterFunc = Callable[[DataFrame, dict[str, Any]], bool]
|
||||
ResponseFilterFunc = Callable[[dict[str, Any], dict[str, Any]], bool]
|
||||
ContentFilterFunc = Callable[[DataFrame, dict[str, Any]], bool]
|
||||
|
||||
# Input filter function mappings
|
||||
input_filter_functions: dict[str, InputFilterFunc] = {
|
||||
'SPECIFIC_VARIABLES_NULL_VALUES': filter_specific_variables_null_values,
|
||||
'EMPTY_DATA': filter_empty_data,
|
||||
}
|
||||
|
||||
# Confidence mappings kept separate from function maps to avoid Union types
|
||||
input_path_confidence: Mapping[str, int] = {
|
||||
'STOP': -1,
|
||||
'CONTINUE': 2,
|
||||
'REPEAT': -1,
|
||||
}
|
||||
|
||||
# MLFlow response filter function mappings
|
||||
mlflow_response_filter_functions: dict[str, ResponseFilterFunc] = {
|
||||
'API_ERROR': api_error_filter,
|
||||
}
|
||||
|
||||
mlflow_response_path_confidence: Mapping[str, int] = {
|
||||
'STOP': -1,
|
||||
'CONTINUE': 10,
|
||||
'REPEAT': -1,
|
||||
}
|
||||
|
||||
# MLFlow content filter function mappings
|
||||
mlflow_content_filter_functions: dict[str, ContentFilterFunc] = {
|
||||
'NAN_VALUES': nan_values_filter,
|
||||
'EMPTY_DATA': filter_empty_data,
|
||||
}
|
||||
|
||||
mlflow_content_path_confidence: Mapping[str, int] = {
|
||||
'STOP': -1,
|
||||
'CONTINUE': 18,
|
||||
'REPEAT': -1,
|
||||
}
|
||||
|
||||
|
||||
class Gates(MinioManager):
|
||||
"""
|
||||
Data quality gates and filtering activities for the Laborious system.
|
||||
|
||||
This class implements comprehensive data quality validation and filtering
|
||||
mechanisms that can be applied at different stages of the prediction pipeline.
|
||||
It provides configurable filters with policy-based decision making to ensure
|
||||
data integrity and quality throughout the ML workflow.
|
||||
|
||||
The class supports multiple filter types and implements a flexible policy
|
||||
system that can be configured for different validation requirements. Each
|
||||
filter returns a path decision (STOP, CONTINUE, REPEAT) along with confidence
|
||||
scores and detailed comments for monitoring and debugging.
|
||||
|
||||
Attributes:
|
||||
input_filter_functions (dict): Mapping of input filter names to functions
|
||||
mlflow_response_filter_functions (dict): Mapping of MLFlow response filter names to functions
|
||||
mlflow_content_filter_functions (dict): Mapping of MLFlow content filter names to functions
|
||||
"""
|
||||
|
||||
minio_repository: MinioRepository | None = None
|
||||
_MAX_DEBUG_DATAFRAME_ROWS = 100
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
minio_repository: MinioRepository | None = None,
|
||||
logger: Logger | None = None,
|
||||
notification_handler: NotificationHandler | None = None,
|
||||
metrics_controller: MetricsController | None = None,
|
||||
):
|
||||
"""
|
||||
Initialize data quality gates with logging and notification capabilities.
|
||||
|
||||
Args:
|
||||
logger: Logger instance for observability and debugging
|
||||
notification_handler: Notification handler for alerts and monitoring
|
||||
|
||||
Raises:
|
||||
Exception: If BaseActivity initialization fails
|
||||
"""
|
||||
MinioManager.__init__(
|
||||
self, minio_repository, logger, notification_handler, metrics_controller
|
||||
)
|
||||
|
||||
def close(self) -> None:
|
||||
"""
|
||||
Close the gates activity and clean up resources.
|
||||
"""
|
||||
|
||||
MinioManager.close(self)
|
||||
|
||||
def __del__(self):
|
||||
self.close()
|
||||
|
||||
def _debug_dataframe(self, message: str, data: Any, metadata: dict[str, Any]) -> None:
|
||||
"""
|
||||
Log dataframe content only when row count is below the configured threshold
|
||||
|
||||
Args:
|
||||
- message (str): Base log message to identify the dataframe in logs
|
||||
- data (Any): Dataframe-like payload to be logged
|
||||
- metadata (dict[str, Any]): Workflow metadata for contextual logging
|
||||
"""
|
||||
self.debug(
|
||||
build_dataframe_debug_message(
|
||||
message=message,
|
||||
data=data,
|
||||
max_rows=self._MAX_DEBUG_DATAFRAME_ROWS,
|
||||
),
|
||||
metadata,
|
||||
)
|
||||
|
||||
@staticmethod
|
||||
def _read_filter_entry(config: dict[str, Any]) -> tuple[str, dict[str, Any]]:
|
||||
"""
|
||||
Read filter policy/config keys in a case-insensitive way.
|
||||
|
||||
Args:
|
||||
config (dict[str, Any]): Filter configuration dictionary.
|
||||
|
||||
Return:
|
||||
tuple[str, dict[str, Any]]: Parsed policy and config payload.
|
||||
"""
|
||||
normalized = {str(key).upper(): value for key, value in config.items()}
|
||||
policy = normalized['POLICY']
|
||||
filter_config = normalized.get('CONFIG', {})
|
||||
return policy, filter_config
|
||||
|
||||
@activity.defn(name='input_gate')
|
||||
async def input_gate(self, input_data: dict[str, Any]) -> tuple[str | None, int, str]:
|
||||
"""
|
||||
Apply input data quality filters and validation.
|
||||
|
||||
This activity validates input data quality using configurable filters
|
||||
before proceeding with ML operations. It applies multiple filter types
|
||||
and returns a path decision based on the filter results and configured
|
||||
policies.
|
||||
|
||||
The method implements a comprehensive filtering system that:
|
||||
1. Applies configured filters to input data
|
||||
2. Evaluates filter results against policy configurations
|
||||
3. Determines appropriate path decisions (STOP, CONTINUE, REPEAT)
|
||||
4. Provides confidence scores and detailed comments
|
||||
5. Handles errors gracefully with notification integration
|
||||
|
||||
Args:
|
||||
input_data: Configuration and data for input validation
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- filters (dict): Filter configuration and policies
|
||||
- data (dict): Input data to validate
|
||||
- path_priority (list[str]): Priority order for path decisions
|
||||
|
||||
Returns:
|
||||
tuple: (path_flag, confidence, comment)
|
||||
- path_flag (str | None): Decision path (STOP, CONTINUE, REPEAT, or None)
|
||||
- confidence (int): Confidence score for the decision
|
||||
- comment (str): Detailed explanation of the decision
|
||||
|
||||
Raises:
|
||||
Exception: If filter execution fails or configuration is invalid
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
|
||||
self.info('Performing input gate...', metadata)
|
||||
|
||||
filters = input_data['filters']
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
path_priority = input_data['path_priority']
|
||||
|
||||
filter_output = []
|
||||
|
||||
self._debug_dataframe('Input data:', data, metadata)
|
||||
self.debug(f'Filters: {filters}', metadata)
|
||||
|
||||
# Apply each configured filter
|
||||
for fil, config in filters.items():
|
||||
if fil not in input_filter_functions:
|
||||
self.error(f'Filter {fil} not found', metadata)
|
||||
continue
|
||||
policy, filter_config = self._read_filter_entry(config)
|
||||
try:
|
||||
if input_filter_functions[fil](data, filter_config):
|
||||
self.debug(f'Data not passed the input filter {fil}:{config}', metadata)
|
||||
filter_output.append(policy)
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=f'INTPUT_GATE_ERROR__{fil}',
|
||||
message=f'Error in filter {fil}:{config}: \n {e}',
|
||||
block='input_gate',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
for path_flag in path_priority:
|
||||
if path_flag in filter_output:
|
||||
self.info(f'Input gate result: {path_flag}', metadata)
|
||||
return path_flag, input_path_confidence[path_flag], 'Input data with bad quality'
|
||||
|
||||
self.info('Nothing was filtered by the input gate', metadata)
|
||||
|
||||
del data
|
||||
|
||||
return None, 0, ''
|
||||
|
||||
@activity.defn(name='mlflow_response_gate')
|
||||
async def mlflow_response_gate(self, input_data: dict[str, Any]) -> tuple[str | None, int, str]:
|
||||
"""
|
||||
Validate MLFlow API response quality and integrity.
|
||||
|
||||
This activity validates MLFlow API responses to ensure they meet quality
|
||||
standards before proceeding with further processing. It applies response-specific
|
||||
filters and determines appropriate path decisions based on response quality.
|
||||
|
||||
The method implements response validation that:
|
||||
1. Applies MLFlow response-specific filters
|
||||
2. Evaluates API response quality and integrity
|
||||
3. Determines path decisions based on response validation results
|
||||
4. Provides confidence scores and detailed validation comments
|
||||
5. Handles API errors and response validation failures
|
||||
|
||||
Args:
|
||||
input_data: Configuration and data for response validation
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- filters (dict): Response filter configuration and policies
|
||||
- data (dict): MLFlow API response data to validate
|
||||
- type (str): Type of MLFlow operation (transform, predict)
|
||||
- path_priority (list[str]): Priority order for path decisions
|
||||
|
||||
Returns:
|
||||
tuple: (path_flag, confidence, comment)
|
||||
- path_flag (str | None): Decision path (STOP, CONTINUE, REPEAT, or None)
|
||||
- confidence (int): Confidence score for the decision
|
||||
- comment (str): Detailed explanation of the decision
|
||||
|
||||
Raises:
|
||||
Exception: If response validation fails or configuration is invalid
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
self.info('Performing mlflow response gate...', metadata)
|
||||
raw_data = input_data['data']
|
||||
filters = input_data['filters']
|
||||
|
||||
self.debug(
|
||||
f'Input data: \n {create_sample_dict(raw_data, max_items=5, max_depth=5)}', metadata
|
||||
)
|
||||
self.debug(f'Filters: {filters}', metadata)
|
||||
|
||||
payload = MinioDataFramePayload.from_dict(raw_data)
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
gate_type = input_data['type']
|
||||
path_priority = input_data['path_priority']
|
||||
|
||||
filter_output = []
|
||||
|
||||
comments = []
|
||||
|
||||
status = payload.status or {}
|
||||
|
||||
for fil, config in filters.items():
|
||||
if fil not in mlflow_response_filter_functions:
|
||||
continue
|
||||
policy, filter_config = self._read_filter_entry(config)
|
||||
try:
|
||||
if mlflow_response_filter_functions[fil](status, filter_config):
|
||||
filter_output.append(policy)
|
||||
comments.append(status.get('message', 'Unknown MLFlow API error'))
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=f'{gate_type.upper()}_GATE_RESPONSE_FILTER__{fil}',
|
||||
message=status.get('message', 'Unknown MLFlow API error'),
|
||||
block='mlflow_gate',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=status.get('traceback'),
|
||||
)
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=f'MLFLOW_GATE_RESPONSE_FILTER__{fil}',
|
||||
message=f'Error in filter {fil}:{config}: \n {e}',
|
||||
block='mlflow_gate',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
for path_flag in path_priority:
|
||||
if path_flag in filter_output:
|
||||
self.info(f'Mlflow response gate result: {path_flag}', metadata)
|
||||
return path_flag, mlflow_response_path_confidence[path_flag], ', '.join(comments)
|
||||
|
||||
self.info('Nothing was filtered by the mlflow response gate', metadata)
|
||||
|
||||
del data
|
||||
|
||||
return None, 0, ''
|
||||
|
||||
@activity.defn(name='mlflow_content_gate')
|
||||
async def mlflow_content_gate(self, input_data: dict[str, Any]) -> tuple[str | None, int, str]:
|
||||
"""
|
||||
Validate MLFlow prediction content quality and integrity.
|
||||
|
||||
This activity validates the content of MLFlow predictions to ensure they
|
||||
meet quality standards before export and persistence. It applies content-specific
|
||||
filters and determines appropriate path decisions based on content quality.
|
||||
|
||||
The method implements content validation that:
|
||||
1. Applies MLFlow content-specific filters
|
||||
2. Evaluates prediction content quality and integrity
|
||||
3. Determines path decisions based on content validation results
|
||||
4. Provides confidence scores and detailed validation comments
|
||||
5. Handles content validation failures and quality issues
|
||||
|
||||
Args:
|
||||
input_data: Configuration and data for content validation
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- filters (dict): Content filter configuration and policies
|
||||
- data (dict): MLFlow prediction content to validate
|
||||
- type (str): Type of MLFlow operation (transform, predict)
|
||||
- path_priority (list[str]): Priority order for path decisions
|
||||
|
||||
Returns:
|
||||
tuple: (path_flag, confidence, comment)
|
||||
- path_flag (str | None): Decision path (STOP, CONTINUE, REPEAT, or None)
|
||||
- confidence (int): Confidence score for the decision
|
||||
- comment (str): Detailed explanation of the decision
|
||||
|
||||
Raises:
|
||||
Exception: If content validation fails or configuration is invalid
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
self.info('Performing mlflow content gate...', metadata)
|
||||
|
||||
filters = input_data['filters']
|
||||
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
gate_type = input_data['type']
|
||||
path_priority = input_data['path_priority']
|
||||
|
||||
filter_output = []
|
||||
|
||||
self._debug_dataframe('Input data:', data, metadata)
|
||||
self.debug(f'Filters: \n {filters}', metadata)
|
||||
|
||||
for fil, config in filters.items():
|
||||
if fil not in mlflow_content_filter_functions:
|
||||
continue
|
||||
policy, filter_config = self._read_filter_entry(config)
|
||||
try:
|
||||
if mlflow_content_filter_functions[fil](data, filter_config):
|
||||
filter_output.append(policy)
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=f'{gate_type.upper()}_GATE_CONTENT_FILTER__{fil}',
|
||||
message=f'Data not passed the content filter {fil}:{config}',
|
||||
block='mlflow_gate',
|
||||
level=NotificationLevel.WARNING,
|
||||
attachment_content=data.to_string(),
|
||||
)
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=f'MLFLOW_GATE_CONTENT_FILTER__{fil}',
|
||||
message=f'Error in filter {fil}:{config}: \n {e}',
|
||||
block='mlflow_gate',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
for path_flag in path_priority:
|
||||
if path_flag in filter_output:
|
||||
self.info(f'Mlflow content gate result: {path_flag}', metadata)
|
||||
return (
|
||||
path_flag,
|
||||
mlflow_content_path_confidence[path_flag],
|
||||
'Transformed data not passed the content filter',
|
||||
)
|
||||
|
||||
self.info('Nothing was filtered by the mlflow content gate', metadata)
|
||||
|
||||
del data
|
||||
|
||||
return None, 0, ''
|
||||
|
||||
def get_prediction_store_policy(
|
||||
self, prediction_store_policy: str, metadata: dict[str, Any]
|
||||
) -> tuple[str, int]:
|
||||
"""
|
||||
Parse and validate prediction store policy configuration.
|
||||
|
||||
This method parses prediction store policy strings in the format 'type:value'
|
||||
and validates them against allowed policy types and values. It provides
|
||||
sensible defaults for invalid configurations and logs policy validation
|
||||
failures for operational monitoring.
|
||||
|
||||
Supported Policy Types:
|
||||
- 'lts': Latest timestamp - sorts data by timestamp descending
|
||||
- 'erl': Earliest timestamp - sorts data by timestamp ascending
|
||||
|
||||
Args:
|
||||
prediction_store_policy (str): Policy string in format 'type:value'
|
||||
metadata (dict[str, Any]): Context metadata for logging and notifications
|
||||
|
||||
Returns:
|
||||
tuple[str, int]: (policy_type, policy_value)
|
||||
- policy_type (str): Validated policy type ('lts' or 'erl')
|
||||
- policy_value (int): Number of rows to retain
|
||||
"""
|
||||
policy_elements = prediction_store_policy.split(':')
|
||||
|
||||
if len(policy_elements) < 2:
|
||||
self.error(
|
||||
f'Invalid prediction store policy: {prediction_store_policy}, using default policy',
|
||||
metadata,
|
||||
)
|
||||
return 'lts', 1
|
||||
|
||||
policy_type = policy_elements[0]
|
||||
policy_value = policy_elements[1]
|
||||
|
||||
# If the policy_type is not lts or erl, we use the default policy
|
||||
# If the policty_value is not a number or 0, we use the default policy
|
||||
if (
|
||||
policy_type not in ['lts', 'erl']
|
||||
or not policy_value.isdigit()
|
||||
or int(policy_value) == 0
|
||||
):
|
||||
self.error(
|
||||
f'Invalid prediction store policy: {prediction_store_policy}, using default policy',
|
||||
metadata,
|
||||
)
|
||||
return 'lts', 1
|
||||
|
||||
return policy_type, int(policy_value)
|
||||
|
||||
@activity.defn(name='format_transformed_data')
|
||||
async def format_transformed_data(self, input_data: dict[str, Any]) -> MinioDataFramePayload:
|
||||
"""
|
||||
Format transformed data for storage and export operations.
|
||||
|
||||
This method formats transformed data from MLFlow model transformations
|
||||
into a standardized format suitable for database storage. It converts
|
||||
wide-format data (columns as variables) into long-format (melted)
|
||||
with proper timestamp handling and model identification.
|
||||
|
||||
The formatting process includes:
|
||||
1. Converting input data dictionary to DataFrame
|
||||
2. Extracting timestamps from DataFrame index
|
||||
3. Resetting index to create sequential row numbers
|
||||
4. Melting data from wide format to long format (variable-value pairs)
|
||||
5. Adding model_id for data lineage tracking
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- data (dict[str, Any]): Transformed data to format (DataFrame-compatible dict)
|
||||
- model_id (str): Unique identifier for the ML model
|
||||
|
||||
Returns:
|
||||
dict: Formatted data dictionary with keys:
|
||||
- timestamp (dict): Timestamp values indexed by row number
|
||||
- variable (dict): Variable names indexed by row number
|
||||
- value (dict): Variable values indexed by row number
|
||||
- model_id (dict): Model identifiers indexed by row number
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
|
||||
model_id = input_data['model_id']
|
||||
|
||||
self.info('Formatting transformed data...', metadata)
|
||||
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
data['timestamp'] = data.index
|
||||
data = data.reset_index(drop=True)
|
||||
|
||||
data = data.melt(id_vars='timestamp', var_name='variable', value_name='value')
|
||||
data['model_id'] = model_id
|
||||
|
||||
return await MinioDataFramePayload.from_dataframe(
|
||||
dataframe=data,
|
||||
minio_repo=self.minio_repository,
|
||||
model_name=input_data['model_name'],
|
||||
operation='transform',
|
||||
workflow_metadata=metadata,
|
||||
last_timestamp=payload.last_timestamp,
|
||||
logger=self.logger,
|
||||
)
|
||||
|
||||
@activity.defn(name='format_prediction')
|
||||
async def format_prediction(self, input_data: dict[str, Any]) -> dict:
|
||||
"""
|
||||
Format prediction data according to configured storage policies.
|
||||
|
||||
This method formats prediction data for storage and export operations.
|
||||
It applies timestamp-based sorting policies, adds metadata fields,
|
||||
and ensures data consistency before persistence. The method supports
|
||||
multiple storage policies for flexible data retention strategies.
|
||||
|
||||
If only one row is present, we use the last timestamp as the timestamp
|
||||
|
||||
Storage Policies:
|
||||
- 'lts:N': Latest timestamp - retains N most recent predictions
|
||||
- 'erl:N': Earliest timestamp - retains N oldest predictions
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- data (dict[str, Any]): Raw prediction data to format
|
||||
- timestamp (str): Timestamp of the data
|
||||
- model_id (str): Unique identifier for the ML model
|
||||
- prediction_confidence (float): Confidence score for the prediction
|
||||
- prediction_store_policy (str): Storage policy in format 'type:value'
|
||||
|
||||
Returns:
|
||||
dict: Formatted prediction data ready for storage and export
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
last_timestamp = input_data['timestamp']
|
||||
prediction_store_policy = input_data['prediction_store_policy']
|
||||
self.info('Formatting prediction...', metadata)
|
||||
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
# Create timestamp column from index and reset index
|
||||
data['timestamp'] = data.index
|
||||
data = data.reset_index(drop=True)
|
||||
|
||||
self.debug(f'Prediction store policy: {prediction_store_policy}', metadata)
|
||||
self._debug_dataframe('Prediction data:', data, metadata)
|
||||
|
||||
policy_type, policy_value = self.get_prediction_store_policy(
|
||||
prediction_store_policy, metadata
|
||||
)
|
||||
|
||||
# If data has no timestamp, we use the default timestamp and not sort the data
|
||||
self.info(
|
||||
f'Sorting data by timestamp and applying policy: {policy_type}:{policy_value}', metadata
|
||||
)
|
||||
|
||||
# If policy_type is lts, we need to sort the data by timestamp descending and take the first policy_value rows
|
||||
if policy_type == 'lts':
|
||||
self.debug('Sorting data by timestamp descending', metadata)
|
||||
data = data.sort_values(by='timestamp', ascending=False)
|
||||
# If policy_type is erl, we need to sort the data by timestamp ascending and take the first policy_value rows
|
||||
elif policy_type == 'erl':
|
||||
self.debug('Sorting data by timestamp ascending', metadata)
|
||||
data = data.sort_values(by='timestamp', ascending=True)
|
||||
else:
|
||||
self.error(f'Invalid policy type: {policy_type}, using default policy', metadata)
|
||||
raise ValueError(f'Invalid policy type: {policy_type}')
|
||||
|
||||
int_policy_value = int(policy_value)
|
||||
|
||||
data = data.head(int_policy_value)
|
||||
if int_policy_value == 1:
|
||||
data['timestamp'] = last_timestamp
|
||||
|
||||
data['model_id'] = input_data['model_id']
|
||||
data['prediction_confidence'] = input_data['prediction_confidence']
|
||||
data['prediction_status'] = 'Good'
|
||||
data['comments'] = ''
|
||||
data = data.sort_values(by='timestamp', ascending=False)
|
||||
data = data.reset_index(drop=True)
|
||||
|
||||
self.info(f'Prediction formatted: {len(data)} rows', metadata)
|
||||
self._debug_dataframe('Prediction data:', data, metadata)
|
||||
|
||||
return data.to_dict()
|
||||
|
||||
@activity.defn(name='format_default_prediction')
|
||||
async def format_default_prediction(self, input_data: dict[str, Any]) -> dict:
|
||||
"""
|
||||
Create and format default prediction data for error conditions.
|
||||
|
||||
This method generates default prediction data when the main prediction
|
||||
pipeline encounters errors or quality issues. It creates a standardized
|
||||
data structure with zero values for predictions and useful metadata
|
||||
for operational monitoring and debugging.
|
||||
|
||||
The default prediction serves as a fallback mechanism to:
|
||||
1. Maintain data pipeline continuity during failures
|
||||
2. Provide operational visibility into prediction quality issues
|
||||
3. Enable downstream systems to handle error conditions gracefully
|
||||
4. Support debugging and troubleshooting efforts
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- timestamp (str): Timestamp for the default prediction
|
||||
- model_id (str): Unique identifier for the ML model
|
||||
- prediction_confidence (float): Confidence score (typically low for errors)
|
||||
- comment (str): Error description or operational comment
|
||||
|
||||
Returns:
|
||||
dict: Formatted default prediction data with error indicators
|
||||
"""
|
||||
|
||||
metadata = input_data['metadata']
|
||||
self.debug('Formatting default prediction...', metadata)
|
||||
|
||||
data = DataFrame(
|
||||
{
|
||||
'prediction': [0],
|
||||
'response_time': [0],
|
||||
'timestamp': [input_data['timestamp']],
|
||||
'model_id': [input_data['model_id']],
|
||||
'prediction_confidence': [input_data['prediction_confidence']],
|
||||
'prediction_status': ['Bad'],
|
||||
'comments': [input_data['comment']],
|
||||
}
|
||||
)
|
||||
|
||||
self.info(f'Default prediction formatted: {data.size} rows', metadata)
|
||||
return data.to_dict()
|
||||
|
||||
@activity.defn(name='format_retrain_report')
|
||||
async def format_retrain_report(self, input_data: dict[str, Any]) -> dict:
|
||||
"""
|
||||
Format retrain report data for storage and audit trail maintenance.
|
||||
|
||||
This method formats model retraining operation results into a standardized
|
||||
report format suitable for database storage and operational monitoring.
|
||||
It captures retraining status, timestamps, and model version information
|
||||
for comprehensive audit trails and operational visibility.
|
||||
|
||||
The formatting process includes:
|
||||
1. Extracting retraining experiment response data
|
||||
2. Capturing model update report information (version, MLflow IDs)
|
||||
3. Formatting timestamps and status information
|
||||
4. Conditionally including version information for successful retrains
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- experiment_response (dict): Retraining experiment response containing:
|
||||
- success (bool): Retraining operation success status
|
||||
- timestamp (str): Timestamp of the retraining operation
|
||||
- message (str): Status message or error description
|
||||
- update_report (dict): Model update report containing:
|
||||
- version (str): New model version identifier
|
||||
- mlflow_run_id (str): MLflow run identifier
|
||||
- mlflow_experiment_id (str): MLflow experiment identifier
|
||||
- model_id (str): Unique identifier for the ML model
|
||||
- model_name (str): Name of the ML model
|
||||
|
||||
Returns:
|
||||
dict: Formatted retrain report dictionary with keys:
|
||||
- model_id (dict): Model identifiers indexed by row number
|
||||
- model_name (dict): Model names indexed by row number
|
||||
- timestamp (dict): Retraining timestamps indexed by row number
|
||||
- status (dict): Retraining status messages indexed by row number
|
||||
- version (dict, optional): Model versions indexed by row number
|
||||
Only included if experiment_response['success'] is True
|
||||
- mlflow_run_id (dict, optional): MLflow run IDs indexed by row number
|
||||
Only included if experiment_response['success'] is True
|
||||
- mlflow_experiment_id (dict, optional): MLflow experiment IDs indexed by row number
|
||||
Only included if experiment_response['success'] is True
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
self.info('Formatting retrain report...', metadata)
|
||||
|
||||
experiment_response = input_data['experiment_response']
|
||||
update_report = input_data['update_report']
|
||||
model_id = input_data['model_id']
|
||||
model_name = input_data['model_name']
|
||||
|
||||
report = DataFrame(
|
||||
{
|
||||
'model_id': [model_id],
|
||||
'model_name': [model_name],
|
||||
'timestamp': [experiment_response['timestamp']],
|
||||
'status': [experiment_response['message']],
|
||||
}
|
||||
)
|
||||
|
||||
if experiment_response['success']:
|
||||
# Retrain was successfull
|
||||
report['version'] = update_report['version']
|
||||
report['mlflow_run_id'] = update_report['mlflow_run_id']
|
||||
report['mlflow_experiment_id'] = update_report['mlflow_experiment_id']
|
||||
|
||||
self._debug_dataframe('Retrain report:', report, metadata)
|
||||
|
||||
return report.to_dict()
|
||||
|
||||
@activity.defn(name='write_metrics')
|
||||
async def write_metrics(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Write prediction performance metrics to Prometheus monitoring system.
|
||||
|
||||
This method records comprehensive metrics for prediction operations,
|
||||
enabling operational monitoring, performance analysis, and alerting.
|
||||
It tracks prediction counts, confidence levels, and response times
|
||||
for each model and pipeline combination.
|
||||
|
||||
Metrics Recorded:
|
||||
1. Prediction Count: Incremental counter for successful predictions
|
||||
2. Confidence Monitor: Current confidence level for predictions
|
||||
3. Response Time Monitor: Histogram of prediction response times
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- metadata (dict[str, Any]): Workflow execution metadata
|
||||
- prediction (dict[str, Any]): Prediction data with metrics
|
||||
|
||||
Raises:
|
||||
Exception: If metrics writing fails or configuration is invalid
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
prediction = DataFrame(input_data['prediction'])
|
||||
prediction_confidence = prediction['prediction_confidence'].values[0]
|
||||
response_time = prediction['response_time'].values[0]
|
||||
opc_metrics = input_data['opc_metrics']
|
||||
|
||||
self.info(f'Writing metrics for model {metadata["model_name"]}', metadata)
|
||||
|
||||
core_tags = {
|
||||
'pod_id': self.pod_id,
|
||||
'runtime': self.runtime,
|
||||
'operation_type': 'predict',
|
||||
'model_name': metadata['model_name'],
|
||||
'workflow_name': metadata['workflow_name'],
|
||||
}
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.PREDICTIONS_WRITTEN_COUNT,
|
||||
tags=core_tags,
|
||||
)
|
||||
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.PREDICTION_CONFIDENCE_MONITOR,
|
||||
method='set',
|
||||
tags=core_tags,
|
||||
value=prediction_confidence,
|
||||
)
|
||||
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.PREDICTION_RESPONSE_TIME_MONITOR,
|
||||
method='observe',
|
||||
tags=core_tags,
|
||||
value=response_time,
|
||||
)
|
||||
|
||||
for server_id, tags in opc_metrics.items():
|
||||
for tag, response_time in tags.items():
|
||||
if response_time is not None:
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.PREDICTION_OPC_WRITING_RESPONSE_TIME_MONITOR,
|
||||
method='observe',
|
||||
tags={
|
||||
**core_tags,
|
||||
'opc_server_id': server_id,
|
||||
'tag': tag,
|
||||
},
|
||||
value=response_time,
|
||||
)
|
||||
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.PREDICTION_OPC_WRITING_COUNT,
|
||||
tags={
|
||||
**core_tags,
|
||||
'opc_server_id': server_id,
|
||||
'tag': tag,
|
||||
},
|
||||
)
|
||||
|
||||
self.info(f'Metrics written for model {metadata["model_name"]}', metadata)
|
||||
528
laborious/activities/mlflow.py
Normal file
528
laborious/activities/mlflow.py
Normal file
@@ -0,0 +1,528 @@
|
||||
from temporalio import activity, workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
import traceback
|
||||
from typing import Any
|
||||
|
||||
import numpy as np
|
||||
from pandas import to_datetime
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.notifications.models import NotificationLevel
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.repository.minio_repository import MinioRepository
|
||||
from sientia_do.temporal.constants import (
|
||||
DATETIME_FORMAT,
|
||||
DATETIME_FORMAT_MS_WITH_TZ,
|
||||
DATETIME_FORMAT_WITH_TZ,
|
||||
now,
|
||||
)
|
||||
from sientia_do.utils.formatters import create_sample_dict
|
||||
|
||||
from laborious.utils.dataframe_debug import build_dataframe_debug_message
|
||||
from laborious.utils.models.minio_dataframe_payload import MinioDataFramePayload
|
||||
from laborious.utils.repository.minio_manager import MinioManager
|
||||
from laborious.utils.repository.model_repository import MLFlowRepository
|
||||
|
||||
|
||||
class MLFlow(MinioManager):
|
||||
"""
|
||||
MLFlow integration activities for model inference operations.
|
||||
|
||||
This class provides activities for interacting with MLFlow models, including
|
||||
data transformation and prediction operations. It handles authentication,
|
||||
data preprocessing, and model management with configurable retention policies.
|
||||
|
||||
The class implements comprehensive error handling and logging for all
|
||||
MLFlow operations, ensuring reliable model inference in production environments.
|
||||
|
||||
Attributes:
|
||||
mlflow_host (str): MLFlow server hostname
|
||||
mlflow_port (int): MLFlow server port
|
||||
mlflow_username (str): MLFlow authentication username
|
||||
mlflow_password (str): MLFlow authentication password
|
||||
model_monitoring_repository (MLFlowRepository): Repository for MLFlow operations
|
||||
"""
|
||||
|
||||
_MAX_DEBUG_DATAFRAME_ROWS = 100
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
mlflow_host: str,
|
||||
mlflow_port: int,
|
||||
mlflow_username: str,
|
||||
mlflow_password: str,
|
||||
minio_repository: MinioRepository | None = None,
|
||||
logger: Logger | None = None,
|
||||
notification_handler: NotificationHandler | None = None,
|
||||
metrics_controller: MetricsController | None = None,
|
||||
):
|
||||
"""
|
||||
Initialize MLFlow activities with server configuration.
|
||||
|
||||
Args:
|
||||
mlflow_host: MLFlow server hostname or IP address
|
||||
mlflow_port: MLFlow server port number
|
||||
mlflow_username: Username for MLFlow authentication
|
||||
mlflow_password: Password for MLFlow authentication
|
||||
logger: Logger instance for observability and debugging
|
||||
notification_handler: Notification handler for alerts and monitoring
|
||||
|
||||
Raises:
|
||||
Exception: If MLFlowRepository initialization fails
|
||||
"""
|
||||
MinioManager.__init__(
|
||||
self, minio_repository, logger, notification_handler, metrics_controller
|
||||
)
|
||||
self.mlflow_host = mlflow_host
|
||||
self.mlflow_port = mlflow_port
|
||||
self.mlflow_username = mlflow_username
|
||||
self.mlflow_password = mlflow_password
|
||||
|
||||
self.model_monitoring_repository = MLFlowRepository(
|
||||
f'{mlflow_host}:{mlflow_port}',
|
||||
mlflow_username,
|
||||
mlflow_password,
|
||||
logger,
|
||||
notification_handler,
|
||||
metrics_controller,
|
||||
)
|
||||
|
||||
def close(self) -> None:
|
||||
"""
|
||||
Close the MLFlow activity and clean up resources.
|
||||
"""
|
||||
MinioManager.close(self)
|
||||
|
||||
def __del__(self):
|
||||
self.close()
|
||||
|
||||
def _debug_dataframe(self, message: str, data: Any, metadata: dict[str, Any]) -> None:
|
||||
"""
|
||||
Log dataframe content only when row count is below the configured threshold
|
||||
|
||||
Args:
|
||||
- message (str): Base log message to identify the dataframe in logs
|
||||
- data (Any): Dataframe-like object expected to expose shape and to_csv
|
||||
- metadata (dict[str, Any]): Workflow metadata for contextual logging
|
||||
"""
|
||||
self.debug(
|
||||
build_dataframe_debug_message(
|
||||
message=message,
|
||||
data=data,
|
||||
max_rows=self._MAX_DEBUG_DATAFRAME_ROWS,
|
||||
),
|
||||
metadata,
|
||||
)
|
||||
|
||||
@activity.defn(name='request_transform')
|
||||
async def request_transform(self, input_data: dict[str, Any]) -> MinioDataFramePayload:
|
||||
"""
|
||||
Transform input data using MLFlow models.
|
||||
|
||||
This activity processes input data through MLFlow model transformation,
|
||||
including data preprocessing, format conversion, and validation. It handles
|
||||
data deduplication, pivoting, and cleanup to ensure optimal model performance.
|
||||
|
||||
The transformation process includes:
|
||||
1. Data deduplication based on variable and timestamp
|
||||
2. Data pivoting for model input format
|
||||
3. Null value handling and cleanup
|
||||
4. MLFlow model transformation request
|
||||
5. Response validation and logging
|
||||
|
||||
Args:
|
||||
input_data: Configuration and data for transformation
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- data (dict): Input data for transformation
|
||||
- model_name (str): Name of the MLFlow model to use
|
||||
- model_retention (int): Model retention period in minutes
|
||||
|
||||
Returns:
|
||||
dict: Transformed data from MLFlow model
|
||||
|
||||
Raises:
|
||||
Exception: If transformation fails or MLFlow model is unavailable
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
self.info('Transforming data...', metadata)
|
||||
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
model_name = input_data['model_name']
|
||||
model_config = input_data.get('model_config', {})
|
||||
|
||||
self._debug_dataframe('Raw input data:', data, metadata)
|
||||
|
||||
# Sort by created_at in descending order and keep first occurrence of each variable/timestamp pair
|
||||
data = data.sort_values('created_at', ascending=False).drop_duplicates(
|
||||
subset=['variable', 'timestamp'], keep='first'
|
||||
)
|
||||
|
||||
# Pivot data for model input format
|
||||
data = data.pivot(index='timestamp', columns='variable', values='value')
|
||||
data.fillna(np.nan, inplace=True)
|
||||
|
||||
data.columns.name = None
|
||||
data.index.name = None
|
||||
|
||||
data['timestamp'] = data.index
|
||||
|
||||
self._debug_dataframe('Processed input data:', data, metadata)
|
||||
|
||||
# Request transformation from MLFlow model
|
||||
response_data = await self.model_monitoring_repository.transform(
|
||||
model_name, data, model_config, metadata
|
||||
)
|
||||
|
||||
self.debug(
|
||||
f'Transform raw response data: \n {create_sample_dict(response_data, max_items=5, max_depth=5)}',
|
||||
metadata,
|
||||
)
|
||||
|
||||
self.debug(
|
||||
f'Transform response data: \n {create_sample_dict(response_data, max_items=5, max_depth=5)}',
|
||||
metadata,
|
||||
)
|
||||
|
||||
self.info('Data transformed successfully', metadata)
|
||||
|
||||
if not response_data.get('success', False):
|
||||
return await MinioDataFramePayload.from_dataframe(
|
||||
dataframe=None,
|
||||
minio_repo=self.minio_repository,
|
||||
model_name=model_name,
|
||||
operation='transform',
|
||||
status=response_data,
|
||||
workflow_metadata=metadata,
|
||||
last_timestamp=payload.last_timestamp,
|
||||
logger=self.logger,
|
||||
)
|
||||
|
||||
return await MinioDataFramePayload.from_dataframe(
|
||||
dataframe=response_data['content'],
|
||||
minio_repo=self.minio_repository,
|
||||
model_name=model_name,
|
||||
operation='transform',
|
||||
workflow_metadata=metadata,
|
||||
status={
|
||||
'success': True,
|
||||
},
|
||||
last_timestamp=payload.last_timestamp,
|
||||
logger=self.logger,
|
||||
)
|
||||
|
||||
@activity.defn(name='request_predict')
|
||||
async def request_predict(self, input_data: dict[str, Any]) -> MinioDataFramePayload:
|
||||
"""
|
||||
Execute predictions using MLFlow models.
|
||||
|
||||
This activity performs ML model inference using MLFlow models with the
|
||||
transformed data. It handles data format conversion, null value processing,
|
||||
and model prediction requests with comprehensive error handling.
|
||||
|
||||
The prediction process includes:
|
||||
1. Data format validation and cleanup
|
||||
2. Null value handling for model compatibility
|
||||
3. MLFlow model prediction request
|
||||
4. Response validation and logging
|
||||
5. Performance monitoring and metrics
|
||||
|
||||
Args:
|
||||
input_data: Configuration and data for prediction
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- data (dict): Transformed data for prediction
|
||||
- model_name (str): Name of the MLFlow model to use
|
||||
- model_retention (int): Model retention period in minutes
|
||||
|
||||
Returns:
|
||||
dict: Prediction results from MLFlow model
|
||||
|
||||
Raises:
|
||||
Exception: If prediction fails or MLFlow model is unavailable
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
self.info('Predicting data...', metadata)
|
||||
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
model_name = input_data['model_name']
|
||||
model_config = input_data.get('model_config', {})
|
||||
|
||||
self._debug_dataframe('Input data for prediction:', data, metadata)
|
||||
|
||||
# Convert numpy.nan to None for model compatibility
|
||||
data.replace(np.nan, None, inplace=True)
|
||||
|
||||
data['timestamp'] = data.index
|
||||
data['timestamp'] = to_datetime(
|
||||
data['timestamp'], format=DATETIME_FORMAT_WITH_TZ
|
||||
).dt.strftime(DATETIME_FORMAT)
|
||||
|
||||
# Request prediction from MLFlow model
|
||||
response_data = await self.model_monitoring_repository.predict(
|
||||
model_name, data, model_config, metadata
|
||||
)
|
||||
|
||||
self.debug(
|
||||
f'Prediction response data: \n {create_sample_dict(response_data, max_items=5, max_depth=5)}',
|
||||
metadata,
|
||||
)
|
||||
|
||||
self.info('Data predicted successfully', metadata)
|
||||
|
||||
if not response_data.get('success', False):
|
||||
return await MinioDataFramePayload.from_dataframe(
|
||||
dataframe=None,
|
||||
minio_repo=self.minio_repository,
|
||||
model_name=model_name,
|
||||
operation='predict',
|
||||
status=response_data,
|
||||
workflow_metadata=metadata,
|
||||
last_timestamp=payload.last_timestamp,
|
||||
logger=self.logger,
|
||||
)
|
||||
|
||||
return await MinioDataFramePayload.from_dataframe(
|
||||
dataframe=response_data['content'],
|
||||
minio_repo=self.minio_repository,
|
||||
model_name=model_name,
|
||||
operation='predict',
|
||||
workflow_metadata=metadata,
|
||||
status={
|
||||
'success': True,
|
||||
},
|
||||
last_timestamp=payload.last_timestamp,
|
||||
logger=self.logger,
|
||||
)
|
||||
|
||||
@activity.defn(name='retrain_model')
|
||||
async def retrain_model(self, input_data: dict[str, Any]) -> dict[str, Any]:
|
||||
"""
|
||||
Retrain MLFlow models with updated training data.
|
||||
|
||||
This activity orchestrates the complete model retraining process,
|
||||
including data preparation, model retraining execution, and result
|
||||
validation. It handles data preprocessing, column cleanup, and
|
||||
comprehensive error handling for production model management.
|
||||
|
||||
The retraining process includes:
|
||||
1. Data timestamp extraction and validation
|
||||
2. Column cleanup and data preparation
|
||||
3. Data pivoting for model input format
|
||||
4. MLFlow model retraining execution
|
||||
5. Result validation and error handling
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- data (dict[str, Any]): Training data for model retraining
|
||||
- model_name (str): Name of the MLFlow model to retrain
|
||||
|
||||
Returns:
|
||||
dict: Retraining results containing:
|
||||
- status (str): Retraining operation status
|
||||
- timestamp (str): Timestamp of the retraining operation
|
||||
- experiment (str): MLFlow experiment identifier
|
||||
|
||||
Raises:
|
||||
Exception: If retraining fails or encounters critical errors
|
||||
"""
|
||||
|
||||
if self.minio_repository is None:
|
||||
raise ValueError('Minio repository not initialized')
|
||||
|
||||
metadata = input_data['metadata']
|
||||
|
||||
try:
|
||||
# Payload-based retrain input (inline dict or MinIO offloaded).
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='ERROR_LOADING_RETRAIN_DATA',
|
||||
message=f'Error loading retrain data: {e}',
|
||||
block='retrain_model',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
self.error(trace, metadata)
|
||||
return {
|
||||
'success': False,
|
||||
'message': f'Error loading retrain data: {e}',
|
||||
'traceback': trace,
|
||||
'timestamp': now().strftime(DATETIME_FORMAT_MS_WITH_TZ),
|
||||
}
|
||||
|
||||
self.debug(f'Retrain data loaded successfully: shape {data.shape}', metadata)
|
||||
|
||||
model_name = input_data['model_name']
|
||||
model_config = input_data.get('model_config', {})
|
||||
|
||||
self.info(f'Retraining model {model_name}...', metadata)
|
||||
|
||||
timestamp = data['timestamp'].max()
|
||||
self.debug(f'Timestamp: {timestamp}', metadata)
|
||||
|
||||
# Sort by created_at in descending order and keep first occurrence of each variable/timestamp pair
|
||||
if 'created_at' in data.columns:
|
||||
data = data.sort_values('created_at', ascending=False).drop_duplicates(
|
||||
subset=['variable', 'timestamp'], keep='first'
|
||||
)
|
||||
else:
|
||||
data = data.drop_duplicates(subset=['variable', 'timestamp'], keep='first')
|
||||
|
||||
data.drop(columns=['model_id'], inplace=True, errors='ignore')
|
||||
data.drop(columns=['created_at'], inplace=True, errors='ignore')
|
||||
|
||||
# Pivot data for model input format
|
||||
data = data.pivot(index='timestamp', columns='variable', values='value')
|
||||
data.fillna(np.nan, inplace=True)
|
||||
# data.reset_index(inplace=True)
|
||||
data.columns.name = None
|
||||
|
||||
data['timestamp'] = data.index
|
||||
data['timestamp'] = to_datetime(
|
||||
data['timestamp'], format=DATETIME_FORMAT_WITH_TZ
|
||||
).dt.strftime(DATETIME_FORMAT)
|
||||
data['timestamp'] = to_datetime(data['timestamp'], format=DATETIME_FORMAT)
|
||||
|
||||
data.columns.name = None
|
||||
|
||||
retrain_output = await self.model_monitoring_repository.retrain_model(
|
||||
data=data, model_name=model_name, model_config=model_config, metadata=metadata
|
||||
)
|
||||
|
||||
if not retrain_output['success']:
|
||||
trace = retrain_output['traceback']
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='RETRAIN_MODEL_ERROR',
|
||||
message=f'Error retraining model {model_name}: {retrain_output["message"]}',
|
||||
block='retrain_model',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
self.error(trace, metadata=metadata)
|
||||
|
||||
return {**retrain_output, 'timestamp': timestamp}
|
||||
|
||||
@activity.defn(name='update_production_model')
|
||||
async def update_production_model(self, input_data: dict[str, Any]) -> dict[Any, Any]:
|
||||
"""
|
||||
Update production model with newly trained model version.
|
||||
|
||||
This activity manages the critical process of updating production
|
||||
models with newly trained versions. It handles model deployment,
|
||||
status tracking, and comprehensive reporting for operational
|
||||
visibility and audit trails.
|
||||
|
||||
The update process includes:
|
||||
1. Production model update execution
|
||||
2. Status and metadata tracking
|
||||
3. Comprehensive reporting and logging
|
||||
4. Error handling and notification
|
||||
5. Audit trail maintenance
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- model_name (str): Name of the MLFlow model to update
|
||||
- experiment (str): MLFlow experiment identifier
|
||||
- model_id (str): Unique identifier for the model version
|
||||
- timestamp (str): Timestamp of the update operation
|
||||
- status (str): Current status of the model update
|
||||
|
||||
Returns:
|
||||
dict[Any, Any]: Comprehensive update report containing:
|
||||
- model_id (str): Model version identifier
|
||||
- model_name (str): Name of the updated model
|
||||
- timestamp (str): Update operation timestamp
|
||||
- status (str): Update operation status
|
||||
- Additional MLFlow response metadata
|
||||
|
||||
Raises:
|
||||
Exception: If production model update fails
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
model_name = input_data['model_name']
|
||||
experiment = input_data['experiment']
|
||||
self.info(
|
||||
f'Updating production model {model_name} from experiment {experiment}...', metadata
|
||||
)
|
||||
|
||||
try:
|
||||
response = await self.model_monitoring_repository.update_production_model(
|
||||
experiment=experiment, model_name=model_name, metadata=metadata
|
||||
)
|
||||
|
||||
self.info(f'Production model {model_name} updated successfully', metadata)
|
||||
return response
|
||||
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='UPDATE_PRODUCTION_MODEL_ERROR',
|
||||
message=f'Error updating production model {model_name}: {e}',
|
||||
block='update_production_model',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
self.error(trace, metadata=metadata)
|
||||
raise e
|
||||
|
||||
@activity.defn(name='get_reference_data')
|
||||
async def get_reference_data(self, input_data: dict[str, Any]) -> list[dict] | None:
|
||||
"""
|
||||
Get reference data from the MLflow Model Registry.
|
||||
|
||||
This method retrieves evaluation reference data stored as artifacts in the
|
||||
MLflow Model Registry. The reference data is typically used for model
|
||||
drift detection, performance comparison, and quality validation. The method
|
||||
loads the data from a CSV artifact file and formats timestamps for
|
||||
consistent processing.
|
||||
|
||||
The method handles:
|
||||
1. Loading evaluation data artifact from MLflow Model Registry
|
||||
2. Timestamp parsing and formatting for consistency
|
||||
3. Data conversion to dictionary format for workflow consumption
|
||||
4. Graceful handling of missing reference data
|
||||
|
||||
Args:
|
||||
input_data (dict): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- model_name (str): Name of the MLFlow model to get reference data from
|
||||
|
||||
Returns:
|
||||
list[dict[Hashable, Any]] | None: Reference data from the MLflow Model Registry
|
||||
as a list of dictionaries. Returns None if reference data is not found
|
||||
or if the artifact does not exist.
|
||||
|
||||
Raises:
|
||||
Exception: If artifact loading fails or encounters errors during processing
|
||||
"""
|
||||
|
||||
metadata = input_data['metadata']
|
||||
model_name = input_data['model_name']
|
||||
artifact = 'evaluation_data.csv'
|
||||
|
||||
reference_data = await self.model_monitoring_repository.load_artifact_dataframe(
|
||||
model_name=model_name, artifact_path=artifact, metadata=metadata
|
||||
)
|
||||
|
||||
if reference_data is None:
|
||||
self.warning(f'Reference data not found for model {model_name}', metadata)
|
||||
return None
|
||||
|
||||
reference_data['timestamp'] = to_datetime(reference_data['timestamp'])
|
||||
reference_data['timestamp'] = reference_data['timestamp'].dt.strftime(DATETIME_FORMAT)
|
||||
|
||||
return reference_data.to_dict(orient='records')
|
||||
1044
laborious/activities/model_import.py
Normal file
1044
laborious/activities/model_import.py
Normal file
File diff suppressed because it is too large
Load Diff
348
laborious/activities/model_import_errors.py
Normal file
348
laborious/activities/model_import_errors.py
Normal file
@@ -0,0 +1,348 @@
|
||||
"""The import's failure vocabulary: a closed catalog, typed errors and one reporting channel.
|
||||
|
||||
Three things live here and nowhere else:
|
||||
|
||||
- **the catalog** — one stable `error_code` and one plain-language `error_reason` per pipeline step.
|
||||
The reason is written for a person who does not know this system exists: what happened, what state
|
||||
the model is in, what to do next. It never carries a path, a table name, an object key, a Python
|
||||
exception class or a traceback, and it is never built from `str(exception)`.
|
||||
- **the typed errors** — the two failures that must not be retried, because repeating them cannot
|
||||
change the answer: a record this workflow does not own, and a statement the database refuses.
|
||||
- **the channel** — `report_import_failure`, the single funnel every failure passes through. It is
|
||||
the only place in the import path that logs an error or sends a notification, which a test
|
||||
asserts, so no failure is reported twice or half-reported.
|
||||
"""
|
||||
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
import traceback
|
||||
from collections.abc import Mapping
|
||||
from dataclasses import dataclass
|
||||
from enum import StrEnum
|
||||
from types import MappingProxyType
|
||||
from typing import Any, Final, Protocol
|
||||
|
||||
from temporalio.exceptions import ApplicationError
|
||||
|
||||
from laborious import metrics
|
||||
from laborious.utils.bundle.steps import ImportStep
|
||||
|
||||
|
||||
class ImportErrorCode(StrEnum):
|
||||
"""The machine-readable half of a failure: the frontend's i18n key and support's triage key.
|
||||
|
||||
Written under `import.code` in the record's JSON detail — not in a column of its own, so the
|
||||
import adds nothing to a table it shares with the training flow.
|
||||
"""
|
||||
|
||||
REQUEST_INVALID = 'IMPORT_REQUEST_INVALID'
|
||||
FILE_UNREADABLE = 'IMPORT_FILE_UNREADABLE'
|
||||
BUNDLE_CANNOT_BE_OPENED = 'IMPORT_BUNDLE_CANNOT_BE_OPENED'
|
||||
BUNDLE_REJECTED = 'IMPORT_BUNDLE_REJECTED'
|
||||
BUNDLE_UNPACK_FAILED = 'IMPORT_BUNDLE_UNPACK_FAILED'
|
||||
BUNDLE_INCOMPLETE = 'IMPORT_BUNDLE_INCOMPLETE'
|
||||
BUNDLE_UNEXPECTED_CONTENT = 'IMPORT_BUNDLE_UNEXPECTED_CONTENT'
|
||||
STORAGE_PREPARATION_FAILED = 'IMPORT_STORAGE_PREPARATION_FAILED'
|
||||
MODEL_FILES_NOT_STORED = 'IMPORT_MODEL_FILES_NOT_STORED'
|
||||
MODEL_NOT_REGISTERED = 'IMPORT_MODEL_NOT_REGISTERED'
|
||||
MODEL_SETTINGS_NOT_SAVED = 'IMPORT_MODEL_SETTINGS_NOT_SAVED'
|
||||
UNEXPECTED_ERROR = 'IMPORT_UNEXPECTED_ERROR'
|
||||
# Codes that never reach a record's `error_message`, and are therefore absent from the catalog:
|
||||
# one names the failure to own a row, one the failure to write one, one the temporary files left
|
||||
# on the worker after an import that otherwise succeeded. All three live on the channel — log,
|
||||
# metric, notification, Temporal error — and the third is additionally flagged in the record's
|
||||
# detail as `cleanup_failed`, without a code and without changing the status.
|
||||
LOG_ROW_NOT_CLAIMABLE = 'IMPORT_LOG_ROW_NOT_CLAIMABLE'
|
||||
STATUS_NOT_RECORDED = 'IMPORT_STATUS_NOT_RECORDED'
|
||||
CLEANUP_INCOMPLETE = 'IMPORT_CLEANUP_INCOMPLETE'
|
||||
|
||||
|
||||
@dataclass(frozen=True)
|
||||
class ImportFailure:
|
||||
"""One classification of one failure: the step, its code and the sentence it stores."""
|
||||
|
||||
step: ImportStep | None
|
||||
code: ImportErrorCode
|
||||
reason: str
|
||||
|
||||
|
||||
_CONTACT_SUPPORT = "Contact support with this import's identifier."
|
||||
_RE_EXPORT = 'Export the model again from the origin platform.'
|
||||
|
||||
IMPORT_FAILURE_CATALOG: Final[Mapping[ImportStep, tuple[ImportErrorCode, str]]] = MappingProxyType(
|
||||
{
|
||||
ImportStep.RECEIVED: (
|
||||
ImportErrorCode.REQUEST_INVALID,
|
||||
'The import could not be started because the request was incomplete or '
|
||||
'contradictory. Nothing was created. Submit the import again.',
|
||||
),
|
||||
ImportStep.DOWNLOAD: (
|
||||
ImportErrorCode.FILE_UNREADABLE,
|
||||
'The uploaded file could not be read, or it is not the file that was sent. '
|
||||
'Upload it again.',
|
||||
),
|
||||
ImportStep.DECRYPTION: (
|
||||
ImportErrorCode.BUNDLE_CANNOT_BE_OPENED,
|
||||
'This file could not be opened: the password is wrong, or the file is damaged or '
|
||||
'was altered. Confirm the password with whoever exported the model, then try '
|
||||
'again.',
|
||||
),
|
||||
ImportStep.ARCHIVE_INSPECTION: (
|
||||
ImportErrorCode.BUNDLE_REJECTED,
|
||||
"The file's contents did not pass the platform's safety checks, so it was not "
|
||||
f'opened. {_RE_EXPORT}',
|
||||
),
|
||||
ImportStep.EXTRACTION: (
|
||||
ImportErrorCode.BUNDLE_UNPACK_FAILED,
|
||||
f'The file could not be unpacked safely and nothing from it was kept. {_RE_EXPORT}',
|
||||
),
|
||||
ImportStep.STRUCTURE_VALIDATION: (
|
||||
ImportErrorCode.BUNDLE_INCOMPLETE,
|
||||
'This file is not a complete model export — part of what the platform needs is '
|
||||
f'missing from it. {_RE_EXPORT}',
|
||||
),
|
||||
ImportStep.CONTENT_POLICY: (
|
||||
ImportErrorCode.BUNDLE_UNEXPECTED_CONTENT,
|
||||
'The file contains something a model export should not contain, so it was '
|
||||
f'rejected. {_RE_EXPORT}',
|
||||
),
|
||||
ImportStep.EXPERIMENT_CREATION: (
|
||||
ImportErrorCode.STORAGE_PREPARATION_FAILED,
|
||||
'The platform could not prepare a place to keep this model. The import stopped '
|
||||
f'and no model was created. {_CONTACT_SUPPORT}',
|
||||
),
|
||||
ImportStep.ARTIFACT_UPLOAD: (
|
||||
ImportErrorCode.MODEL_FILES_NOT_STORED,
|
||||
"The model's files could not be stored on this platform. The import stopped and "
|
||||
f'the model is not available. {_CONTACT_SUPPORT}',
|
||||
),
|
||||
ImportStep.REGISTRATION: (
|
||||
ImportErrorCode.MODEL_NOT_REGISTERED,
|
||||
"The model's files were stored, but the model itself could not be registered, so "
|
||||
f'it cannot be used. {_CONTACT_SUPPORT}',
|
||||
),
|
||||
ImportStep.MODEL_DOCUMENT: (
|
||||
ImportErrorCode.MODEL_SETTINGS_NOT_SAVED,
|
||||
'The model was registered, but the settings that tell the platform how to run it '
|
||||
f'could not be saved. {_CONTACT_SUPPORT}',
|
||||
),
|
||||
}
|
||||
)
|
||||
|
||||
UNCLASSIFIED_FAILURE: Final[tuple[ImportErrorCode, str]] = (
|
||||
ImportErrorCode.UNEXPECTED_ERROR,
|
||||
f'The import stopped for an unexpected reason and no model was created. {_CONTACT_SUPPORT}',
|
||||
)
|
||||
|
||||
# `cleanup` deletes temporary files on the worker. It is never the reported failure: when every
|
||||
# other step succeeded and only cleanup failed, the import is a success and the leak is a log line.
|
||||
# So it deliberately has no user-facing sentence, and the catalog-completeness test knows it.
|
||||
STEPS_WITHOUT_A_USER_FACING_REASON: Final[frozenset[ImportStep]] = frozenset({ImportStep.CLEANUP})
|
||||
|
||||
|
||||
def classify_import_failure(
|
||||
step: ImportStep | None, exception: BaseException | None = None
|
||||
) -> ImportFailure:
|
||||
"""Turn a failure into the one code and the one sentence that will be recorded.
|
||||
|
||||
The exception's text is **ignored entirely** — it is what carries paths, table names and type
|
||||
names, and it belongs in the log. What decides the outcome is the step.
|
||||
|
||||
Args:
|
||||
step: the step that was being attempted, or `None` when none had been entered.
|
||||
exception: the failure, when there is one to hand. It is accepted so callers read as
|
||||
"classify this failure" and never absent because the classification needs it: the
|
||||
catalog is keyed by step, and an exception cannot cross an activity boundary with its
|
||||
type intact anyway — the terminal write classifies from the step alone.
|
||||
|
||||
Returns:
|
||||
ImportFailure: step, code and the reason to store.
|
||||
"""
|
||||
del exception # the catalog is keyed by step; the exception's text never reaches the record
|
||||
if step is None or step not in IMPORT_FAILURE_CATALOG:
|
||||
code, reason = UNCLASSIFIED_FAILURE
|
||||
return ImportFailure(step=step, code=code, reason=reason)
|
||||
code, reason = IMPORT_FAILURE_CATALOG[step]
|
||||
return ImportFailure(step=step, code=code, reason=reason)
|
||||
|
||||
|
||||
class ImportLogRowNotClaimableError(ApplicationError):
|
||||
"""The record named by `import_run_id` is not this workflow's to write.
|
||||
|
||||
Raised when the claim affects zero rows: no such row, a `TRAIN` row, or a row already running
|
||||
under another workflow. Non-retryable on purpose — a second attempt would read the same rows and
|
||||
reach the same conclusion — and loud everywhere except the row itself, which belongs to someone
|
||||
else.
|
||||
"""
|
||||
|
||||
def __init__(self, message: str, *, import_run_id: Any = None, observed: str = '') -> None:
|
||||
super().__init__(
|
||||
message,
|
||||
type='ImportLogRowNotClaimableError',
|
||||
non_retryable=True,
|
||||
)
|
||||
self.import_run_id = import_run_id
|
||||
self.observed = observed
|
||||
|
||||
|
||||
class ImportStatusRejectedError(ApplicationError):
|
||||
"""The database accepted the connection and refused the statement.
|
||||
|
||||
A `CHECK` violation, an undefined column, a value too long for its column. `V12` not being
|
||||
applied yet lands here, at the terminal write, and it must fail on the first attempt instead of
|
||||
spending the whole retry envelope to say so.
|
||||
"""
|
||||
|
||||
def __init__(self, message: str) -> None:
|
||||
super().__init__(message, type='ImportStatusRejectedError', non_retryable=True)
|
||||
|
||||
|
||||
class ImportInputError(ApplicationError):
|
||||
"""The request is incomplete or contradictory. Fails at `received`, on the claimed row."""
|
||||
|
||||
def __init__(self, message: str) -> None:
|
||||
super().__init__(
|
||||
message,
|
||||
{'step': ImportStep.RECEIVED.value, 'gate': None},
|
||||
type='ImportInputError',
|
||||
non_retryable=True,
|
||||
)
|
||||
|
||||
|
||||
class ImportGateRejectedError(ApplicationError):
|
||||
"""A gate rejected the bundle, and the error says which one.
|
||||
|
||||
Gates 2 to 7 all run inside one activity, so the step the workflow was *attempting* is not
|
||||
precise enough to record. An exception loses its Python type crossing an activity boundary but
|
||||
keeps its `details`, so the step and the gate travel there and the terminal write can name them.
|
||||
"""
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
message: str,
|
||||
*,
|
||||
step: ImportStep,
|
||||
gate: int | None = None,
|
||||
cause: str | None = None,
|
||||
) -> None:
|
||||
super().__init__(
|
||||
message,
|
||||
{'step': step.value, 'gate': gate, 'cause': cause},
|
||||
type='ImportGateRejectedError',
|
||||
non_retryable=True,
|
||||
)
|
||||
self.step = step
|
||||
self.gate = gate
|
||||
|
||||
|
||||
def failure_location(exception: BaseException | None) -> tuple[str | None, int | None]:
|
||||
"""Read the step and gate an activity's failure carries, if it carried any.
|
||||
|
||||
Walks the `__cause__` chain because Temporal wraps an activity failure in an `ActivityError`.
|
||||
Returns `(None, None)` when the failure did not say where it happened, and the caller then falls
|
||||
back to the step it was attempting.
|
||||
"""
|
||||
seen = 0
|
||||
candidate: BaseException | None = exception
|
||||
while candidate is not None and seen < 10:
|
||||
details = getattr(candidate, 'details', None)
|
||||
if details and isinstance(details[0], dict) and 'step' in details[0]:
|
||||
location = details[0]
|
||||
gate = location.get('gate')
|
||||
return location.get('step'), int(gate) if isinstance(gate, int) else None
|
||||
candidate = candidate.__cause__
|
||||
seen += 1
|
||||
return None, None
|
||||
|
||||
|
||||
class FailureSinks(Protocol):
|
||||
"""What the channel needs from its caller: the repository's existing observability surface."""
|
||||
|
||||
def error(self, message: str, metadata: dict | None = None) -> None: ...
|
||||
|
||||
def get_core_labels(self, metadata: dict | None = None, operation_type: str = '-') -> dict: ...
|
||||
|
||||
async def emit_metric(
|
||||
self,
|
||||
metric_object: Any,
|
||||
tags: dict[str, Any],
|
||||
method: str = 'inc',
|
||||
value: float | None = None,
|
||||
) -> None: ...
|
||||
|
||||
async def send_notification_async(
|
||||
self,
|
||||
metadata: dict,
|
||||
notification_id: str,
|
||||
message: str,
|
||||
block: str,
|
||||
level: str = 'INFO',
|
||||
attachment_content: str | None = None,
|
||||
) -> None: ...
|
||||
|
||||
|
||||
async def report_import_failure(
|
||||
sinks: FailureSinks,
|
||||
step: ImportStep | None,
|
||||
exception: BaseException | None,
|
||||
*,
|
||||
import_run_id: Any,
|
||||
workflow_id: str,
|
||||
metadata: dict[str, Any] | None = None,
|
||||
code: ImportErrorCode | None = None,
|
||||
marker: str | None = None,
|
||||
verdict: str | None = None,
|
||||
detail_text: str | None = None,
|
||||
) -> ImportFailure:
|
||||
"""Report one failure through every sink, exactly once.
|
||||
|
||||
Sinks, in order: a structured log carrying the ids, the step, the code **and** the exception
|
||||
with its traceback (the only sink that gets the exception text); the import error metric, with
|
||||
the code in `operation_type`; a notification through the existing handler. The exception itself
|
||||
reaches Temporal by being raised, and the record is the fifth, optional sink — the terminal
|
||||
write, when the row can be written at all.
|
||||
|
||||
Args:
|
||||
sinks: the activity providing logger, metrics and notifications.
|
||||
step: the pipeline step, or `None` for a failure that is not one (see `marker`).
|
||||
exception: the failure.
|
||||
import_run_id: the record's id, for correlation.
|
||||
workflow_id: the identifier a user quotes to support.
|
||||
metadata: workflow metadata for labels and the notification.
|
||||
code: an explicit code, for the two failures that are not pipeline steps.
|
||||
marker: `not_claimable` or `status_write` — what a step name would have been.
|
||||
verdict: for a failed terminal write, the verdict it could not record, so the outcome
|
||||
survives in text even when it cannot survive in the row.
|
||||
detail_text: the failure as text, for the callers whose exception object is already gone —
|
||||
anything that crossed an activity boundary. Used in place of a traceback.
|
||||
|
||||
Returns:
|
||||
ImportFailure: the classification that was reported.
|
||||
"""
|
||||
failure = classify_import_failure(step, exception)
|
||||
if code is not None:
|
||||
failure = ImportFailure(step=step, code=code, reason=failure.reason)
|
||||
|
||||
where = marker or (step.value if step else 'unknown')
|
||||
if exception is not None:
|
||||
detail = ''.join(traceback.format_exception(exception)).strip()
|
||||
else:
|
||||
detail = detail_text or 'no exception object available'
|
||||
verdict_line = f' verdict_not_recorded={verdict}' if verdict else ''
|
||||
sinks.error(
|
||||
f'model import failed: step={where} code={failure.code.value} '
|
||||
f'import_run_id={import_run_id} workflow_id={workflow_id}{verdict_line}\n{detail}',
|
||||
metadata or {},
|
||||
)
|
||||
|
||||
labels = sinks.get_core_labels(metadata or {}, operation_type=failure.code.value)
|
||||
await sinks.emit_metric(metric_object=metrics.MODEL_IMPORT_ERROR_COUNT, tags=labels)
|
||||
await sinks.send_notification_async(
|
||||
metadata=metadata or {},
|
||||
notification_id=failure.code.value,
|
||||
message=failure.reason,
|
||||
block=where,
|
||||
level='ERROR',
|
||||
)
|
||||
return failure
|
||||
364
laborious/activities/model_metrics.py
Normal file
364
laborious/activities/model_metrics.py
Normal file
@@ -0,0 +1,364 @@
|
||||
from temporalio import activity, workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
import time
|
||||
import traceback
|
||||
import warnings
|
||||
from typing import Any
|
||||
|
||||
import numpy as np
|
||||
from pandas import DataFrame, Index, to_datetime
|
||||
from sientia.ModelAnalysis import ModelAnalysis
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.notifications.models import NotificationLevel
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.observability.sientia_monitoring import SientiaMonitoring
|
||||
from sientia_do.temporal.constants import DATETIME_FORMAT, DATETIME_FORMAT_WITH_TZ
|
||||
|
||||
from laborious import metrics
|
||||
from laborious.utils.dataframe_debug import build_dataframe_debug_message
|
||||
|
||||
warnings.filterwarnings('ignore', category=RuntimeWarning, message='Degrees of freedom <= 0')
|
||||
warnings.filterwarnings(
|
||||
'ignore', category=RuntimeWarning, message='invalid value encountered in scalar divide'
|
||||
)
|
||||
|
||||
|
||||
class ModelMetrics(SientiaMonitoring):
|
||||
"""
|
||||
Metrics activities for the Laborious system.
|
||||
|
||||
This class provides activities for writing metrics to the Prometheus monitoring system.
|
||||
"""
|
||||
|
||||
_MAX_DEBUG_DATAFRAME_ROWS = 100
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
logger: Logger,
|
||||
notification_handler: NotificationHandler,
|
||||
metrics_controller: MetricsController,
|
||||
):
|
||||
SientiaMonitoring.__init__(self, logger, notification_handler, metrics_controller)
|
||||
|
||||
def close(self) -> None:
|
||||
"""
|
||||
Close the model metrics activity and clean up resources.
|
||||
"""
|
||||
SientiaMonitoring.shutdown(self)
|
||||
|
||||
def __del__(self):
|
||||
self.close()
|
||||
|
||||
def _debug_dataframe(self, message: str, data: Any, metadata: dict[str, Any]) -> None:
|
||||
"""
|
||||
Log dataframe content only when row count is below the configured threshold
|
||||
|
||||
Args:
|
||||
- message (str): Base log message to identify the dataframe in logs
|
||||
- data (Any): Dataframe-like payload to be logged
|
||||
- metadata (dict[str, Any]): Workflow metadata for contextual logging
|
||||
"""
|
||||
self.debug(
|
||||
build_dataframe_debug_message(
|
||||
message=message,
|
||||
data=data,
|
||||
max_rows=self._MAX_DEBUG_DATAFRAME_ROWS,
|
||||
),
|
||||
metadata,
|
||||
)
|
||||
|
||||
async def get_drift_metrics(
|
||||
self,
|
||||
reference_data: DataFrame,
|
||||
target_data: DataFrame,
|
||||
target_name: str,
|
||||
reference_columns: Index,
|
||||
drift_metrics: list[str],
|
||||
chunk_period: str,
|
||||
metadata: dict[str, Any],
|
||||
) -> DataFrame:
|
||||
"""
|
||||
Calculate univariate drift metrics for a model.
|
||||
Args:
|
||||
model_analysis (ModelAnalysis): Model analysis object
|
||||
reference_data (DataFrame): Reference data
|
||||
target_data (DataFrame): Target data
|
||||
reference_columns (list[str]): Reference columns
|
||||
drift_metrics (list[str]): Drift metrics
|
||||
metadata (dict[str, Any]): Workflow execution metadata
|
||||
"""
|
||||
|
||||
config = {
|
||||
'target': target_name,
|
||||
'prediction': 'prediction',
|
||||
'timestamp': 'timestamp',
|
||||
'features': reference_columns,
|
||||
}
|
||||
|
||||
model_analysis = ModelAnalysis(config=config)
|
||||
|
||||
self._debug_dataframe(
|
||||
f'Reference data: Size {reference_data.shape}', reference_data, metadata
|
||||
)
|
||||
|
||||
self._debug_dataframe(f'Target data: Size {target_data.shape}', target_data, metadata)
|
||||
|
||||
core_labels = self.get_core_labels(metadata, operation_type='detect_univariate_drift')
|
||||
start_time = time.time()
|
||||
try:
|
||||
univariate_drift = model_analysis.detect_univariate_drift(
|
||||
reference_df=reference_data,
|
||||
analysis_df=target_data,
|
||||
features=reference_columns,
|
||||
timestamp_col=config['timestamp'],
|
||||
methods=drift_metrics,
|
||||
chunk_period=chunk_period,
|
||||
)
|
||||
except Exception as e:
|
||||
self.error(f'Error detecting univariate drift: {e}', metadata)
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.MODEL_ANALYZE_ERROR_COUNT, tags=core_labels
|
||||
)
|
||||
raise e
|
||||
await self.observe_lag(start_time, metrics.MODEL_ANALYZE_LAG, core_labels)
|
||||
await self.emit_metric(metric_object=metrics.MODEL_ANALYZE_COUNT, tags=core_labels)
|
||||
|
||||
core_labels = self.get_core_labels(metadata, operation_type='detect_multivariate_drift')
|
||||
start_time = time.time()
|
||||
try:
|
||||
multivariate_drift = model_analysis.detect_multivariate_drift(
|
||||
reference_df=reference_data,
|
||||
analysis_df=target_data,
|
||||
features=reference_columns,
|
||||
timestamp_col=config['timestamp'],
|
||||
chunk_period=chunk_period,
|
||||
)
|
||||
except Exception as e:
|
||||
self.error(f'Error detecting multivariate drift: {e}', metadata)
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.MODEL_ANALYZE_ERROR_COUNT, tags=core_labels
|
||||
)
|
||||
raise e
|
||||
await self.observe_lag(start_time, metrics.MODEL_ANALYZE_LAG, core_labels)
|
||||
await self.emit_metric(metric_object=metrics.MODEL_ANALYZE_COUNT, tags=core_labels)
|
||||
|
||||
start_time = time.time()
|
||||
core_labels = self.get_core_labels(metadata, operation_type='get_drift_metrics_dataframe')
|
||||
try:
|
||||
drift_df = model_analysis.get_drift_metrics_dataframe(
|
||||
univariate_drift=univariate_drift,
|
||||
multivariate_drift=multivariate_drift,
|
||||
)
|
||||
except Exception as e:
|
||||
self.error(f'Error getting drift metrics: {e}', metadata)
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.MODEL_ANALYZE_ERROR_COUNT, tags=core_labels
|
||||
)
|
||||
raise e
|
||||
await self.observe_lag(start_time, metrics.MODEL_ANALYZE_LAG, core_labels)
|
||||
await self.emit_metric(metric_object=metrics.MODEL_ANALYZE_COUNT, tags=core_labels)
|
||||
|
||||
self._debug_dataframe(f'Drift dataframe: Size {drift_df.shape}', drift_df, metadata)
|
||||
|
||||
return drift_df
|
||||
|
||||
@activity.defn(name='calculate_drift')
|
||||
async def calculate_drift(self, input_data: dict[str, Any]) -> list[dict]:
|
||||
"""
|
||||
Calculate drift metrics for a model.
|
||||
|
||||
Args:
|
||||
input_data (dict[str, Any]): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- model_name (str): Name of the MLFlow model to calculate drift for
|
||||
- reference_data (pd.DataFrame): Reference data for the model
|
||||
- target_data (pd.DataFrame): Target data for calculating drift
|
||||
- target_name (str): Name of the target column
|
||||
- drift_metrics (list[str]): List of drift metrics to calculate
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
model_name = input_data['model_name']
|
||||
model_id = input_data['model_id']
|
||||
reference_raw_data = input_data['reference_data']
|
||||
target_data = DataFrame(input_data['target_data'])
|
||||
target_name = input_data['target_name']
|
||||
drift_metrics = input_data['drift_metrics']
|
||||
chunk_period = input_data['chunk_period']
|
||||
|
||||
if chunk_period not in ['min', 's']:
|
||||
self.error(f'Invalid chunk period: {chunk_period}', metadata)
|
||||
raise ValueError(f'Invalid chunk period: {chunk_period}, must be "min" or "s"')
|
||||
|
||||
self.info(f'Calculating drift for model {model_name}', metadata)
|
||||
|
||||
target_data = target_data.pivot(index='timestamp', columns='variable', values='value')
|
||||
target_data['timestamp'] = target_data.index
|
||||
target_data['timestamp'] = to_datetime(target_data['timestamp'])
|
||||
target_data['timestamp'] = target_data['timestamp'].dt.strftime(DATETIME_FORMAT)
|
||||
target_data = target_data.reset_index(drop=True)
|
||||
target_data.dropna(inplace=True)
|
||||
|
||||
if reference_raw_data is not None:
|
||||
self.info('Using reference data', metadata)
|
||||
reference_data = DataFrame(reference_raw_data)
|
||||
accurate = True
|
||||
else:
|
||||
# Get 30% first rows of target_data
|
||||
self.warning('Using 30% first rows of target data as reference data', metadata)
|
||||
target_data.sort_values(by='timestamp', ascending=True, inplace=True)
|
||||
reference_data = target_data.head(int(len(target_data) * 0.3))
|
||||
accurate = False
|
||||
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='MODEL_METRICS_REFERENCE_DATA_WARNING',
|
||||
message='Using 30% first rows of target data as reference data',
|
||||
block='model_metrics',
|
||||
level=NotificationLevel.WARNING,
|
||||
attachment_content=reference_data.to_csv(),
|
||||
)
|
||||
|
||||
reference_columns = reference_data.drop(
|
||||
columns=[target_name, 'timestamp', 'target', 'prediction'], errors='ignore'
|
||||
).columns
|
||||
|
||||
try:
|
||||
drift_df = await self.get_drift_metrics(
|
||||
reference_data=reference_data,
|
||||
target_data=target_data,
|
||||
target_name=target_name,
|
||||
reference_columns=reference_columns,
|
||||
drift_metrics=drift_metrics,
|
||||
chunk_period=chunk_period,
|
||||
metadata=metadata,
|
||||
)
|
||||
except Exception as e:
|
||||
self.error(f'Error getting drift metrics: {e}', metadata)
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='MODEL_METRICS_GET_DRIFT_METRICS_ERROR',
|
||||
message=f'Error getting drift metrics: {e}',
|
||||
block='model_metrics',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=traceback.format_exc(),
|
||||
)
|
||||
return []
|
||||
|
||||
if drift_df.empty:
|
||||
self.warning('No drift metrics found', metadata)
|
||||
return []
|
||||
|
||||
# Drop unnecessary columns
|
||||
drift_df.drop(columns=['p_value'], inplace=True)
|
||||
|
||||
# Extract timestamps only until minutes
|
||||
if chunk_period == 'min':
|
||||
target_timestamps = target_data['timestamp'].apply(lambda x: x[:16])
|
||||
else:
|
||||
target_timestamps = target_data['timestamp']
|
||||
|
||||
# Drop rows where timestamp is not in target data, to avoid save drift from reference
|
||||
drift_df = drift_df[drift_df['timestamp'].isin(target_timestamps)]
|
||||
|
||||
if drift_df.empty:
|
||||
self.warning(
|
||||
'No drift metrics found after dropping rows where timestamp is not in target data',
|
||||
metadata,
|
||||
)
|
||||
return []
|
||||
|
||||
# Rename columns to match database columns
|
||||
drift_df.rename(
|
||||
columns={
|
||||
'metric': 'method',
|
||||
'statistic': 'value',
|
||||
},
|
||||
inplace=True,
|
||||
)
|
||||
|
||||
# Drop duplicates
|
||||
drift_df.drop_duplicates(
|
||||
subset=['timestamp', 'method', 'feature'], keep='first', inplace=True
|
||||
)
|
||||
|
||||
drift_df['model_id'] = model_id
|
||||
drift_df['accurate'] = accurate
|
||||
|
||||
drift_df['timestamp'] = to_datetime(drift_df['timestamp'])
|
||||
drift_df['timestamp'] = drift_df['timestamp'].dt.tz_localize('UTC')
|
||||
drift_df['timestamp'] = drift_df['timestamp'].dt.strftime(DATETIME_FORMAT_WITH_TZ)
|
||||
|
||||
self._debug_dataframe(f'Drift dataframe: Size {drift_df.shape}', drift_df, metadata)
|
||||
|
||||
return drift_df.to_dict(orient='records')
|
||||
|
||||
@activity.defn(name='calculate_simple_metrics')
|
||||
async def calculate_simple_metrics(self, input_data: dict[str, Any]) -> list[dict]:
|
||||
"""
|
||||
Calculate simple metrics for a model. Metrics available are:
|
||||
- rmse
|
||||
- mse
|
||||
- mae
|
||||
- r2
|
||||
- accuracy
|
||||
- precision
|
||||
- recall
|
||||
- f1
|
||||
Args:
|
||||
input_data (dict[str, Any]): Input data containing:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- model_id (str): ID of the MLFlow model
|
||||
- target_data (pd.DataFrame): Target data for calculating metrics, containing target and prediction columns
|
||||
- metrics (list[str]): List of metrics to calculate
|
||||
Returns:
|
||||
dict[Hashable, Any]: Dictionary containing the calculated metrics
|
||||
"""
|
||||
|
||||
metadata = input_data['metadata']
|
||||
model_id = input_data['model_id']
|
||||
target_data = DataFrame(input_data['target_data'])
|
||||
metrics = input_data['metrics']
|
||||
interval_minutes = input_data['interval_minutes']
|
||||
|
||||
data_size = target_data.shape[0]
|
||||
|
||||
output_data = []
|
||||
|
||||
diff = target_data['target'] - target_data['prediction']
|
||||
diff_squared = diff**2
|
||||
|
||||
self.info(f'Calculating simple metrics for model {model_id}: {metrics}', metadata)
|
||||
|
||||
for metric in metrics:
|
||||
if metric == 'rmse':
|
||||
output_data.append({'metric': 'rmse', 'value': np.sqrt(np.mean(diff_squared))})
|
||||
elif metric == 'mse':
|
||||
output_data.append({'metric': 'mse', 'value': np.mean(diff_squared)})
|
||||
elif metric == 'mae':
|
||||
output_data.append({'metric': 'mae', 'value': np.mean(np.abs(diff))})
|
||||
elif metric == 'r2':
|
||||
y_true = target_data['target']
|
||||
y_mean = np.mean(y_true)
|
||||
|
||||
ss_res = np.sum(diff_squared)
|
||||
ss_tot = np.sum((y_true - y_mean) ** 2)
|
||||
|
||||
# Evita divisão por zero
|
||||
if ss_tot == 0:
|
||||
r2_score = 0.0
|
||||
else:
|
||||
r2_score = 1 - (ss_res / ss_tot)
|
||||
|
||||
output_data.append({'metric': 'r2', 'value': r2_score})
|
||||
|
||||
data = DataFrame(output_data)
|
||||
data['model_id'] = model_id
|
||||
data['timestamp'] = target_data['timestamp'].max()
|
||||
data['data_size'] = data_size
|
||||
data['interval_minutes'] = interval_minutes
|
||||
|
||||
self._debug_dataframe(f'Simple metrics dataframe: Size {data.shape}', data, metadata)
|
||||
|
||||
return data.to_dict(orient='records')
|
||||
515
laborious/activities/opc.py
Normal file
515
laborious/activities/opc.py
Normal file
@@ -0,0 +1,515 @@
|
||||
from temporalio import activity, workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
import traceback
|
||||
from collections.abc import Hashable
|
||||
from typing import Any
|
||||
|
||||
from pandas import DataFrame
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.notifications.models import NotificationLevel
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.observability.sientia_monitoring import SientiaMonitoring
|
||||
|
||||
from laborious.utils.repository.opc_repository import OpcRepository
|
||||
|
||||
OPC_WRITTING_ERROR_CONFIDENCE = 12
|
||||
OPC_SESSION_BAD_CONFIDENCE = 14
|
||||
OPC_SESSION_BAD_COMMENT_PREFIX = 'OPC UA session/channel error:'
|
||||
OPC_WRITTING_ERROR_MESSAGE = 'Some data could not be written to OPC servers'
|
||||
OPC_RECONNECT_IN_PROGRESS_COMMENT = 'OPC UA reconnect in progress'
|
||||
OPC_COMMENT_SEPARATOR = ' | '
|
||||
|
||||
|
||||
def _opc_session_bad_comment(opc_status: str | None) -> str:
|
||||
status = opc_status or 'Unknown'
|
||||
return f'{OPC_SESSION_BAD_COMMENT_PREFIX} {status}'
|
||||
|
||||
|
||||
def _apply_opc_write_error(
|
||||
error_info: dict[str, Any] | None,
|
||||
session_bad_seen: bool,
|
||||
session_bad_status: str | None,
|
||||
reconnect_in_progress_seen: bool,
|
||||
) -> tuple[bool, str | None, bool]:
|
||||
"""
|
||||
Update session/reconnect flags from an OPC write error payload.
|
||||
|
||||
Args:
|
||||
error_info: Repository error details, or None when the write succeeded.
|
||||
session_bad_seen: Whether a session_bad error was seen so far.
|
||||
session_bad_status: Last known OPC status for session errors.
|
||||
reconnect_in_progress_seen: Whether reconnect_in_progress was seen so far.
|
||||
|
||||
Return:
|
||||
Updated (session_bad_seen, session_bad_status, reconnect_in_progress_seen).
|
||||
"""
|
||||
if not error_info:
|
||||
return session_bad_seen, session_bad_status, reconnect_in_progress_seen
|
||||
|
||||
kind = error_info.get('opc_error_kind')
|
||||
if kind == 'session_bad':
|
||||
return True, error_info.get('opc_status', session_bad_status), reconnect_in_progress_seen
|
||||
if kind == 'reconnect_in_progress':
|
||||
return session_bad_seen, session_bad_status, True
|
||||
return session_bad_seen, session_bad_status, reconnect_in_progress_seen
|
||||
|
||||
|
||||
class OPC(SientiaMonitoring):
|
||||
"""
|
||||
OPC server integration activities for real-time data export.
|
||||
|
||||
This class provides comprehensive OPC UA client functionality for connecting
|
||||
to multiple OPC servers and writing prediction data in real-time. It implements
|
||||
secure communication with certificate-based authentication and automatic
|
||||
reconnection capabilities.
|
||||
|
||||
The class supports multiple OPC servers with individual configurations and
|
||||
provides robust error handling and monitoring for production environments.
|
||||
|
||||
Attributes:
|
||||
opc_servers (dict): Configuration for multiple OPC servers
|
||||
opc_repository (dict): Active OPC repository connections
|
||||
logger (Logger): Logging and observability instance
|
||||
notification_handler (NotificationHandler): Notification management instance
|
||||
"""
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
opc_servers: dict[str, dict[str, Any]],
|
||||
logger: Logger,
|
||||
notification_handler: NotificationHandler,
|
||||
metrics_controller: MetricsController,
|
||||
):
|
||||
self.logger = logger
|
||||
self.notification_handler = notification_handler
|
||||
self.opc_servers = opc_servers
|
||||
|
||||
SientiaMonitoring.__init__(self, logger, notification_handler, metrics_controller)
|
||||
|
||||
self.opc_repository: dict[str, OpcRepository] = {}
|
||||
|
||||
async def init_opc(self):
|
||||
"""
|
||||
Initialize OPC server connections and establish communication channels.
|
||||
|
||||
This method iterates through all configured OPC servers and attempts to
|
||||
establish secure connections using certificate-based authentication.
|
||||
Each server connection is managed independently, and connection failures
|
||||
are reported through the notification system.
|
||||
|
||||
The method performs the following operations:
|
||||
1. Creates OpcRepository instances for each configured server
|
||||
2. Establishes secure connections with certificate validation
|
||||
3. Reports connection success/failure through notifications
|
||||
4. Logs connection status for operational visibility
|
||||
|
||||
Raises:
|
||||
Exception: If OPC repository initialization fails or connection
|
||||
establishment encounters critical errors
|
||||
|
||||
Note:
|
||||
Connection failures are logged and reported but do not prevent
|
||||
the initialization of other OPC servers. Each server is handled
|
||||
independently to ensure maximum availability.
|
||||
"""
|
||||
self.logger.info('Initializing OPC servers...')
|
||||
for opc_id, server in self.opc_servers.items():
|
||||
self.opc_repository[opc_id] = OpcRepository(
|
||||
opc_id=server['id'],
|
||||
server_name=server['server_name'],
|
||||
url=server['url'],
|
||||
logger=self.logger,
|
||||
server_uri=server['server_uri'],
|
||||
cert_path=server['cert_path'],
|
||||
private_key_path=server['private_key_path'],
|
||||
server_cert_path=server['server_cert_path'],
|
||||
notification_handler=self.notification_handler,
|
||||
reconnection_interval=server['reconnection_interval'],
|
||||
metrics_controller=self.metrics_controller,
|
||||
)
|
||||
is_connected, error_data = await self.opc_repository[opc_id].connect()
|
||||
if not is_connected:
|
||||
await self.send_notification_async(
|
||||
metadata={
|
||||
'model_id': '-',
|
||||
'model_name': '-',
|
||||
'workflow_name': '-',
|
||||
'schedule_name': 'INITIALIZATION',
|
||||
},
|
||||
notification_id=error_data['notification_id'],
|
||||
message=error_data['message'],
|
||||
block=error_data['block'],
|
||||
level=error_data.get('level', NotificationLevel.ERROR),
|
||||
attachment_content=error_data.get('attachment_content', None),
|
||||
)
|
||||
else:
|
||||
self.logger.info(
|
||||
f'OPC server {opc_id}:{server["server_name"]} connected successfully.'
|
||||
)
|
||||
|
||||
async def write_data(
|
||||
self,
|
||||
server_id: str,
|
||||
tag: str,
|
||||
data: Any,
|
||||
data_type: str,
|
||||
tag_type: str,
|
||||
metadata: dict[str, Any],
|
||||
) -> tuple[float | None, dict[str, Any] | None]:
|
||||
"""
|
||||
Write data to a specific OPC server tag with comprehensive error handling.
|
||||
|
||||
Return:
|
||||
tuple[float | None, dict[str, Any] | None]: Response time on success, or
|
||||
(None, error info_data) on repository failure.
|
||||
"""
|
||||
|
||||
try:
|
||||
is_success, info_data = await self.opc_repository[server_id].write_data(
|
||||
tag, data, data_type, metadata
|
||||
)
|
||||
if not is_success:
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=info_data['notification_id'],
|
||||
message=info_data['message'],
|
||||
block=info_data['block'],
|
||||
level=info_data.get('level', NotificationLevel.ERROR),
|
||||
attachment_content=info_data.get('attachment_content', None),
|
||||
)
|
||||
return None, info_data
|
||||
return info_data['response_time'], None
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id=f'WRITE_OPC_{tag_type.upper()}_ERROR',
|
||||
message=f'Error writing data to OPC server: {e}',
|
||||
block='write_opc_data',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
raise e
|
||||
|
||||
async def validate_server(self, server_id: str, metadata: dict[str, Any]) -> bool:
|
||||
"""
|
||||
Validate that an OPC server is available and configured for write operations.
|
||||
|
||||
This method checks if the specified OPC server exists in the active
|
||||
repository and is available for data writing operations. It provides
|
||||
immediate feedback for server availability and logs validation failures
|
||||
for operational monitoring.
|
||||
|
||||
Args:
|
||||
server_id (str): Unique identifier for the OPC server to validate
|
||||
metadata (dict[str, Any]): Context metadata for logging and notifications
|
||||
|
||||
Returns:
|
||||
bool: True if server is available, False otherwise
|
||||
|
||||
Note:
|
||||
Server validation failures are automatically reported through the
|
||||
notification system with detailed information about available servers.
|
||||
This helps operators quickly identify configuration issues.
|
||||
"""
|
||||
if self.opc_repository.get(server_id) is None:
|
||||
message = f'OPC server {server_id} not found to perform write operation.'
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='OPC_SERVER_NOT_FOUND',
|
||||
message=message,
|
||||
block='write_opc_data',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=f'OPC servers: {list(self.opc_repository.keys())}',
|
||||
)
|
||||
return False
|
||||
return True
|
||||
|
||||
async def _write_tags_from_config(
|
||||
self,
|
||||
server_id: str,
|
||||
tags_config: dict[str, dict[str, Any]],
|
||||
data: DataFrame,
|
||||
data_column: str,
|
||||
tag_type: str,
|
||||
log_label: str,
|
||||
metadata: dict[str, Any],
|
||||
) -> tuple[dict[str, float | None], bool, str | None, bool]:
|
||||
"""
|
||||
Write a group of OPC tags and collect response times and error flags.
|
||||
|
||||
Args:
|
||||
server_id: Target OPC server identifier.
|
||||
tags_config: Tag name to configuration mapping.
|
||||
data: DataFrame with prediction/confidence columns.
|
||||
data_column: Column name whose first row value is written.
|
||||
tag_type: Tag category passed to write_data ('prediction' or 'confidence').
|
||||
log_label: Human-readable label for success logs.
|
||||
metadata: Context metadata for logging and notifications.
|
||||
|
||||
Return:
|
||||
(response_times, session_bad_seen, session_bad_status, reconnect_in_progress_seen)
|
||||
"""
|
||||
response_times: dict[str, float | None] = {}
|
||||
session_bad_seen = False
|
||||
session_bad_status: str | None = None
|
||||
reconnect_in_progress_seen = False
|
||||
|
||||
for tag, tag_config in tags_config.items():
|
||||
response_time, error_info = await self.write_data(
|
||||
server_id=server_id,
|
||||
tag=tag,
|
||||
data=data.head(1)[data_column].values[0],
|
||||
data_type=tag_config['data_type'],
|
||||
tag_type=tag_type,
|
||||
metadata=metadata,
|
||||
)
|
||||
session_bad_seen, session_bad_status, reconnect_in_progress_seen = (
|
||||
_apply_opc_write_error(
|
||||
error_info,
|
||||
session_bad_seen,
|
||||
session_bad_status,
|
||||
reconnect_in_progress_seen,
|
||||
)
|
||||
)
|
||||
if response_time is not None:
|
||||
self.info(
|
||||
f'{log_label} written to OPC server {server_id} for tag {tag}.',
|
||||
metadata,
|
||||
)
|
||||
response_times[tag] = response_time
|
||||
|
||||
return response_times, session_bad_seen, session_bad_status, reconnect_in_progress_seen
|
||||
|
||||
async def manage_output_tags(
|
||||
self,
|
||||
server_id: str,
|
||||
config: dict[str, Any],
|
||||
data: DataFrame,
|
||||
metadata: dict[str, Any],
|
||||
) -> tuple[bool, dict[str, float | None], bool, str | None, bool]:
|
||||
"""
|
||||
Manage the writing of prediction and confidence data to OPC server tags.
|
||||
|
||||
This method orchestrates the writing of multiple data types to OPC servers
|
||||
based on configuration. It handles both prediction data and confidence
|
||||
values independently, allowing for flexible tag configuration and
|
||||
comprehensive error handling.
|
||||
|
||||
The method supports two main tag types:
|
||||
1. Prediction tags: Write actual prediction values to configured OPC tags
|
||||
2. Confidence tags: Write confidence scores to separate OPC tags
|
||||
|
||||
Args:
|
||||
server_id (str): Unique identifier for the target OPC server
|
||||
config (dict[str, Any]): OPC tag configuration containing:
|
||||
- prediction_tags (dict, optional): Prediction tag configurations
|
||||
- confidence_tags (dict, optional): Confidence tag configurations
|
||||
data (DataFrame): DataFrame containing prediction and confidence data
|
||||
metadata (dict[str, Any]): Context metadata for logging and notifications
|
||||
success (bool): Current success status to maintain across operations
|
||||
|
||||
Returns:
|
||||
tuple[bool, int]: (overall_success, total_tags_written)
|
||||
- overall_success: True if all configured tags were written successfully
|
||||
- total_tags_written: Count of successfully written tags
|
||||
"""
|
||||
response_times: dict[str, float | None] = {}
|
||||
session_bad_seen = False
|
||||
session_bad_status: str | None = None
|
||||
reconnect_in_progress_seen = False
|
||||
|
||||
tag_groups = (
|
||||
('prediction_tags', 'prediction', 'prediction', 'Prediction data'),
|
||||
('confidence_tags', 'prediction_confidence', 'confidence', 'Confidence data'),
|
||||
)
|
||||
for config_key, data_column, tag_type, log_label in tag_groups:
|
||||
if config_key not in config:
|
||||
continue
|
||||
(
|
||||
group_times,
|
||||
group_session_bad,
|
||||
group_status,
|
||||
group_reconnect,
|
||||
) = await self._write_tags_from_config(
|
||||
server_id=server_id,
|
||||
tags_config=config[config_key],
|
||||
data=data,
|
||||
data_column=data_column,
|
||||
tag_type=tag_type,
|
||||
log_label=log_label,
|
||||
metadata=metadata,
|
||||
)
|
||||
response_times.update(group_times)
|
||||
if group_session_bad:
|
||||
session_bad_seen = True
|
||||
session_bad_status = group_status or session_bad_status
|
||||
if group_reconnect:
|
||||
reconnect_in_progress_seen = True
|
||||
|
||||
success = None not in response_times.values()
|
||||
return (
|
||||
success,
|
||||
response_times,
|
||||
session_bad_seen,
|
||||
session_bad_status,
|
||||
reconnect_in_progress_seen,
|
||||
)
|
||||
|
||||
@activity.defn(name='write_opc_data')
|
||||
async def write_opc_data(
|
||||
self, input_data: dict[str, Any]
|
||||
) -> tuple[dict[Hashable, Any], dict[str, dict[str, float | None]]]:
|
||||
"""
|
||||
Write prediction and confidence data to OPC servers. The two writing
|
||||
operations are optional and independent of each other.
|
||||
|
||||
Args:
|
||||
- input_data(dict[str, Any]): The input data. Contains the following keys:
|
||||
- data(dict[str, Any]): The dataframe that contains the data to write
|
||||
to the OPC servers.
|
||||
- opc_output_config(dict[str, Any]): The OPC writing configuration.
|
||||
The keys are the OPC server names and the values contain:
|
||||
- prediction_tags(dict[str, Any]): The tags to write to the OPC servers.
|
||||
- confidence_tags(dict[str, Any]): The tags to write to the OPC servers.
|
||||
|
||||
Returns:
|
||||
- dict[Any, Any]: The data that was written to the OPC servers.
|
||||
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
self.info('Writing data to OPC servers...', metadata)
|
||||
data = DataFrame(input_data['data'])
|
||||
opc_output_config = input_data['opc_output_config']
|
||||
self.info(f'Data to write: {data.size} rows', metadata)
|
||||
|
||||
success = True
|
||||
session_bad_seen = False
|
||||
session_bad_status: str | None = None
|
||||
reconnect_in_progress_seen = False
|
||||
|
||||
metrics: dict[str, dict[str, float | None]] = {}
|
||||
|
||||
for server_id, config in opc_output_config.items():
|
||||
if not await self.validate_server(server_id, metadata):
|
||||
success = False
|
||||
continue
|
||||
|
||||
(
|
||||
local_success,
|
||||
local_response_times,
|
||||
local_session_bad,
|
||||
local_status,
|
||||
local_reconnect_in_progress,
|
||||
) = await self.manage_output_tags(server_id, config, data, metadata)
|
||||
metrics[server_id] = local_response_times
|
||||
local_count = len(local_response_times)
|
||||
success = success and local_success
|
||||
if local_session_bad:
|
||||
session_bad_seen = True
|
||||
session_bad_status = local_status or session_bad_status
|
||||
if local_reconnect_in_progress:
|
||||
reconnect_in_progress_seen = True
|
||||
|
||||
self.info(
|
||||
f'Process completed for OPC server {server_id}: {local_count} of {len(config.get("prediction_tags", []))} prediction tags and {len(config.get("confidence_tags", []))} confidence tags',
|
||||
metadata,
|
||||
)
|
||||
|
||||
return (
|
||||
self.process_confidence(
|
||||
data,
|
||||
success,
|
||||
metadata,
|
||||
session_bad=session_bad_seen,
|
||||
opc_status=session_bad_status,
|
||||
reconnect_in_progress=reconnect_in_progress_seen,
|
||||
),
|
||||
metrics,
|
||||
)
|
||||
|
||||
def process_confidence(
|
||||
self,
|
||||
data: DataFrame,
|
||||
success: bool,
|
||||
metadata: dict[str, Any],
|
||||
*,
|
||||
session_bad: bool = False,
|
||||
opc_status: str | None = None,
|
||||
reconnect_in_progress: bool = False,
|
||||
) -> dict[Hashable, Any]:
|
||||
"""
|
||||
Process prediction confidence based on OPC write operation success.
|
||||
|
||||
This method updates the prediction confidence values in the DataFrame
|
||||
based on the success status of OPC server write operations. If any
|
||||
write operations failed, it sets the confidence to a predefined error
|
||||
value to indicate data quality issues.
|
||||
|
||||
The method implements a confidence degradation strategy:
|
||||
- Success: Maintains original confidence values
|
||||
- Failure: Sets confidence to error value for operational awareness
|
||||
|
||||
Args:
|
||||
data (DataFrame): DataFrame containing prediction and confidence data
|
||||
success (bool): Overall success status of OPC write operations
|
||||
metadata (dict[str, Any]): Context metadata for logging and notifications
|
||||
|
||||
Returns:
|
||||
dict[Any, Any]: Processed data as a dictionary with updated confidence values
|
||||
|
||||
Note:
|
||||
The error confidence value (OPC_WRITTING_ERROR_CONFIDENCE = 12) is
|
||||
used to indicate that data was not successfully exported to OPC servers.
|
||||
This allows downstream systems to handle data quality appropriately.
|
||||
"""
|
||||
|
||||
if not success:
|
||||
comment_parts: list[str] = []
|
||||
confidence = OPC_WRITTING_ERROR_CONFIDENCE
|
||||
|
||||
if session_bad:
|
||||
comment_parts.append(_opc_session_bad_comment(opc_status))
|
||||
confidence = OPC_SESSION_BAD_CONFIDENCE
|
||||
if reconnect_in_progress:
|
||||
comment_parts.append(OPC_RECONNECT_IN_PROGRESS_COMMENT)
|
||||
confidence = OPC_SESSION_BAD_CONFIDENCE
|
||||
if not comment_parts:
|
||||
comment_parts.append(OPC_WRITTING_ERROR_MESSAGE)
|
||||
|
||||
comments = OPC_COMMENT_SEPARATOR.join(comment_parts)
|
||||
data['prediction_confidence'] = confidence
|
||||
data['comments'] = comments
|
||||
self.debug(
|
||||
f'OPC write issues, confidence={confidence}, comments={comments}',
|
||||
metadata,
|
||||
)
|
||||
else:
|
||||
self.debug('Data written to OPC servers successfully.', metadata)
|
||||
|
||||
return data.to_dict()
|
||||
|
||||
async def aclose(self):
|
||||
"""
|
||||
Gracefully shutdown all OPC server connections and cleanup resources.
|
||||
|
||||
This method ensures proper cleanup of all active OPC server connections
|
||||
by calling the disconnect method on each repository instance. It's
|
||||
designed to be called during application shutdown to prevent resource
|
||||
leaks and ensure clean termination.
|
||||
|
||||
The method performs the following cleanup operations:
|
||||
1. Iterates through all active OPC repository connections
|
||||
2. Calls disconnect() on each repository instance
|
||||
3. Allows for graceful connection termination
|
||||
4. Prevents resource leaks and connection hanging
|
||||
|
||||
Note:
|
||||
This method should be called during application shutdown to ensure
|
||||
proper cleanup. It handles all active connections regardless of
|
||||
their current state and provides a clean shutdown experience.
|
||||
"""
|
||||
for opc in self.opc_repository.values():
|
||||
await opc.disconnect()
|
||||
210
laborious/activities/storage.py
Normal file
210
laborious/activities/storage.py
Normal file
@@ -0,0 +1,210 @@
|
||||
from temporalio import activity, workflow
|
||||
|
||||
from laborious.utils.repository.minio_manager import MinioManager
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
# Extend the Temporal Postgres activities for convenient query -> MinIO export
|
||||
import traceback
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
import pandas as pd
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.notifications.models import NotificationLevel
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.repository.minio_repository import MinioRepository
|
||||
from sientia_do.temporal.activities.postgres import Postgres
|
||||
from sientia_do.temporal.constants import now
|
||||
|
||||
from laborious.utils.models.minio_dataframe_payload import MinioDataFramePayload
|
||||
|
||||
_LOAD_QUERY_OFFLOAD_SKIP_KEYS = frozenset({'model_name', 'key_prefix', 'size_threshold_bytes'})
|
||||
|
||||
|
||||
class Storage(Postgres, MinioManager):
|
||||
"""
|
||||
Extensions for Postgres activities with a helper to export query results
|
||||
directly to MinIO as Parquet and return the object name.
|
||||
"""
|
||||
|
||||
minio_repository: MinioRepository | None = None
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
host: str,
|
||||
port: int,
|
||||
user: str,
|
||||
password: str,
|
||||
dbname: str,
|
||||
min_connections: int,
|
||||
max_connections: int,
|
||||
retention_hours: int = 24,
|
||||
minio_repository: MinioRepository | None = None,
|
||||
logger: Logger | None = None,
|
||||
notification_handler: NotificationHandler | None = None,
|
||||
metrics_controller: MetricsController | None = None,
|
||||
):
|
||||
self.retention_hours = retention_hours
|
||||
Postgres.__init__(
|
||||
self,
|
||||
host=host,
|
||||
port=port,
|
||||
user=user,
|
||||
password=password,
|
||||
dbname=dbname,
|
||||
min_connections=min_connections,
|
||||
max_connections=max_connections,
|
||||
logger=logger,
|
||||
notification_handler=notification_handler,
|
||||
metrics_controller=metrics_controller,
|
||||
)
|
||||
|
||||
MinioManager.__init__(
|
||||
self, minio_repository, logger, notification_handler, metrics_controller
|
||||
)
|
||||
|
||||
@activity.defn(name='load_query_with_minio_offload')
|
||||
async def load_query_with_minio_offload(
|
||||
self, input_data: dict[str, Any]
|
||||
) -> MinioDataFramePayload:
|
||||
"""
|
||||
Run the custom SQL load, then return a MinIO-aware dataframe wire dict.
|
||||
|
||||
Args (input_data):
|
||||
metadata (dict): Workflow metadata (same as load_custom_query).
|
||||
query (str): SQL query.
|
||||
datetime_columns (list[str], optional): Datetime column names.
|
||||
model_name (str): Model name for object key basename.
|
||||
key_prefix (str, optional): Directory prefix inside the bucket.
|
||||
size_threshold_bytes (int, optional): Override env offload threshold.
|
||||
|
||||
Returns:
|
||||
dict[str, Any]: Flat ``MinioDataFramePayload`` dict or ``success: False`` on failure.
|
||||
"""
|
||||
if self.minio_repository is None:
|
||||
raise ValueError('Minio repository not initialized')
|
||||
|
||||
metadata: dict = input_data.get('metadata', {})
|
||||
model_name = input_data['model_name']
|
||||
|
||||
rows = await self.load_custom_query(
|
||||
input_data,
|
||||
)
|
||||
if not rows:
|
||||
self.error(
|
||||
'load_query_with_minio_offload failed: No data returned from query', metadata
|
||||
)
|
||||
dataframe = None
|
||||
else:
|
||||
dataframe = pd.DataFrame(rows)
|
||||
|
||||
return await MinioDataFramePayload.from_dataframe(
|
||||
dataframe,
|
||||
minio_repo=self.minio_repository,
|
||||
workflow_metadata=metadata,
|
||||
model_name=model_name,
|
||||
operation='initial',
|
||||
logger=self.logger,
|
||||
)
|
||||
|
||||
@activity.defn(name='export_payload_to_postgres')
|
||||
async def export_payload_to_postgres(self, input_data: dict[str, Any]) -> dict:
|
||||
"""
|
||||
Export a payload to PostgreSQL.
|
||||
"""
|
||||
metadata = input_data.get('metadata')
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
data = await payload.retrieve(self.minio_repository, metadata)
|
||||
|
||||
return await self.export_data_to_postgres(
|
||||
{
|
||||
**input_data,
|
||||
'data': data,
|
||||
}
|
||||
)
|
||||
|
||||
@activity.defn(name='cleanup_minio_objects_expired')
|
||||
async def cleanup_minio_objects_expired(self, input_data: dict[str, Any]) -> dict[str, Any]:
|
||||
"""
|
||||
Delete objects under the given prefixes that are older than the retention window.
|
||||
|
||||
Args (input_data):
|
||||
metadata (dict): Workflow metadata for logging and metrics.
|
||||
prefixes (list[str]): Key prefixes to scan (one level or subtree per prefix).
|
||||
|
||||
Returns:
|
||||
dict[str, Any]: ``success``, ``deleted_count``, and optional ``message``.
|
||||
"""
|
||||
if self.minio_repository is None:
|
||||
raise ValueError('Minio repository not initialized')
|
||||
|
||||
metadata = input_data.get('metadata', {})
|
||||
payload = MinioDataFramePayload.from_dict(input_data['data'])
|
||||
prefix = payload.cleanup_prefix()
|
||||
base = now()
|
||||
cutoff = (base.replace(tzinfo=None) if base.tzinfo else base) - timedelta(
|
||||
hours=self.retention_hours
|
||||
)
|
||||
|
||||
report: dict[str, Any] = {
|
||||
'failed': {},
|
||||
'deleted': {},
|
||||
'failed_count': 0,
|
||||
'deleted_count': 0,
|
||||
}
|
||||
try:
|
||||
keys = await self.minio_repository.list_objects(
|
||||
prefix=prefix,
|
||||
recursive=True,
|
||||
metadata=metadata,
|
||||
)
|
||||
for key in keys:
|
||||
try:
|
||||
ts = MinioDataFramePayload.parse_object_timestamp(key)
|
||||
if ts is None:
|
||||
continue
|
||||
if ts >= cutoff:
|
||||
continue
|
||||
await self.minio_repository.delete_file(
|
||||
object_name=key,
|
||||
metadata=metadata,
|
||||
)
|
||||
except Exception as e:
|
||||
report['failed'][key] = {
|
||||
'success': False,
|
||||
'message': str(e),
|
||||
}
|
||||
report['failed_count'] += 1
|
||||
continue
|
||||
report['deleted'][key] = {
|
||||
'success': True,
|
||||
'message': 'Deleted',
|
||||
}
|
||||
report['deleted_count'] += 1
|
||||
except Exception as e:
|
||||
trace = traceback.format_exc()
|
||||
await self.send_notification_async(
|
||||
metadata=metadata,
|
||||
notification_id='ERROR_CLEANUP_MINIO_OBJECTS_EXPIRED',
|
||||
message=f'Error cleaning up MinIO objects: {e}',
|
||||
block='cleanup_minio_objects_expired',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=trace,
|
||||
)
|
||||
self.error(trace, metadata)
|
||||
else:
|
||||
# Cleanup success is expected in normal flow; avoid noisy INFO notifications
|
||||
# that do not impact behavior and can flood observability in test runs.
|
||||
self.info('MinIO objects cleaned up successfully', metadata)
|
||||
|
||||
return report
|
||||
|
||||
def close(self) -> None:
|
||||
"""Close Storage resources (MinIO client and Postgres engine)."""
|
||||
if hasattr(self, 'engine'):
|
||||
Postgres.close(self)
|
||||
MinioManager.close(self)
|
||||
|
||||
def __del__(self):
|
||||
self.close()
|
||||
239
laborious/metrics.py
Normal file
239
laborious/metrics.py
Normal file
@@ -0,0 +1,239 @@
|
||||
"""
|
||||
Laborious Metrics Module
|
||||
|
||||
This module defines all Prometheus metrics used by the Sientia DataOps Laborious system
|
||||
for monitoring and observability. The metrics provide insights into system performance,
|
||||
prediction quality, and operational health.
|
||||
|
||||
The metrics are designed to be scraped by Prometheus and can be visualized in
|
||||
Grafana or other monitoring dashboards to provide real-time visibility into
|
||||
the system's operation.
|
||||
|
||||
Key Metric Categories:
|
||||
- Application Health: Overall system status and availability
|
||||
- Prediction Operations: Count and performance of prediction operations
|
||||
- Data Quality: Confidence levels and validation results
|
||||
- Export Operations: Database and OPC export performance
|
||||
- Response Times: Performance monitoring for various operations
|
||||
|
||||
Metric Labels:
|
||||
- pod_id: Kubernetes pod identifier for multi-instance deployments
|
||||
- runtime: Runtime / environment identifier (matches ``RUNTIME`` env, see ``SientiaMonitoring``)
|
||||
- model_name: Name of the ML model being used
|
||||
- workflow_name: Name of the prediction pipeline
|
||||
- opc_server_id: Identifier for OPC server operations
|
||||
"""
|
||||
|
||||
from prometheus_client import Counter, Gauge, Histogram
|
||||
from sientia_do.observability.metrics import CORE_LABELS
|
||||
|
||||
# Application health metric
|
||||
APP_UP = Gauge(
|
||||
'app_up',
|
||||
'Indicates if the application is running (1) or shutting down (0)',
|
||||
['pod_id'],
|
||||
)
|
||||
|
||||
# Prediction operation metrics
|
||||
PREDICTIONS_WRITTEN_COUNT = Counter(
|
||||
'laborious_predictions_written_count',
|
||||
'Number of predictions written to the database table predictions',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
# Prediction quality metrics
|
||||
PREDICTION_CONFIDENCE_MONITOR = Gauge(
|
||||
'laborious_prediction_confidence_monitor',
|
||||
'Current confidence of each prediction',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
# Prediction total response time
|
||||
PREDICTION_RESPONSE_TIME_MONITOR = Histogram(
|
||||
'laborious_prediction_response_time_monitor',
|
||||
'Current response time of each prediction',
|
||||
CORE_LABELS,
|
||||
buckets=[0.01, 0.05, 0.1, 0.2, 0.5, 1.0, 2.0, 5.0, 10.0],
|
||||
)
|
||||
|
||||
|
||||
# ================== OPC metrics ==================
|
||||
|
||||
|
||||
PREDICTION_OPC_WRITING_COUNT = Counter(
|
||||
'laborious_prediction_opc_writing_count',
|
||||
'Number of predictions written to the OPC server',
|
||||
[*CORE_LABELS, 'opc_server_id', 'tag'],
|
||||
)
|
||||
|
||||
PREDICTION_OPC_WRITING_RESPONSE_TIME_MONITOR = Histogram(
|
||||
'laborious_prediction_opc_writing_response_time_monitor',
|
||||
'Current response time of each prediction written to the OPC server',
|
||||
[*CORE_LABELS, 'opc_server_id', 'tag'],
|
||||
buckets=[0.01, 0.05, 0.1, 0.2, 0.5, 1.0, 2.0, 5.0, 10.0],
|
||||
)
|
||||
|
||||
OPC_CONNECTIONS_TOTAL = Counter(
|
||||
'opc_connections_initiated_total',
|
||||
'Total connection attempts to OPC servers',
|
||||
['pod_id', 'server_name'],
|
||||
)
|
||||
OPC_CONNECTIONS_FAILED = Counter(
|
||||
'opc_connections_failed_total',
|
||||
'Total failed connection attempts to OPC servers',
|
||||
['pod_id', 'server_name'],
|
||||
)
|
||||
OPC_CONNECTION_STATUS = Gauge(
|
||||
'opc_connection_status',
|
||||
'Connection status with the OPC server (1=connected, 0=disconnected)',
|
||||
['pod_id', 'server_name', 'server_url'],
|
||||
)
|
||||
|
||||
_OPC_SESSION_DEBUG_LABELS = ['pod_id', 'server_name', 'runtime', 'opc_server_id', 'session_id']
|
||||
|
||||
OPC_SESSION_CREATED_TOTAL = Counter(
|
||||
'opc_session_created_total',
|
||||
'OPC UA sessions established (after successful connect)',
|
||||
_OPC_SESSION_DEBUG_LABELS,
|
||||
)
|
||||
|
||||
OPC_SESSION_CLOSED_TOTAL = Counter(
|
||||
'opc_session_closed_total',
|
||||
'OPC UA client disconnects completed (session tear-down initiated)',
|
||||
_OPC_SESSION_DEBUG_LABELS,
|
||||
)
|
||||
|
||||
OPC_SESSION_REVISED_TIMEOUT_MS = Gauge(
|
||||
'opc_session_revised_timeout_milliseconds',
|
||||
'Server-revised OPC UA session timeout (RevisedSessionTimeout) in ms after connect',
|
||||
_OPC_SESSION_DEBUG_LABELS,
|
||||
)
|
||||
|
||||
OPC_WRITE_ATTEMPT_LABELS = [*_OPC_SESSION_DEBUG_LABELS, 'model_id', 'model_name', 'result']
|
||||
|
||||
OPC_WRITE_ATTEMPTS_TOTAL = Counter(
|
||||
'opc_write_attempts_total',
|
||||
'OPC UA write attempts with session and outcome (result=OK or exception class name)',
|
||||
OPC_WRITE_ATTEMPT_LABELS,
|
||||
)
|
||||
|
||||
OPC_WRITE_INTER_ARRIVAL_OVER_SESSION_TIMEOUT_TOTAL = Counter(
|
||||
'opc_write_inter_arrival_over_session_timeout_total',
|
||||
'Successful writes where seconds since the previous successful write exceeded RevisedSessionTimeout (ms)',
|
||||
_OPC_SESSION_DEBUG_LABELS,
|
||||
)
|
||||
|
||||
# ================== Model metrics ==================
|
||||
|
||||
MODEL_READ_LAG = Histogram(
|
||||
'laborious_model_read_lag',
|
||||
'Lag between the start and read of read operations',
|
||||
CORE_LABELS,
|
||||
buckets=[0.01, 0.05, 0.1, 0.2, 0.5, 1.0, 2.0, 5.0, 10.0],
|
||||
)
|
||||
|
||||
MODEL_WRITE_LAG = Histogram(
|
||||
'laborious_model_write_lag',
|
||||
'Lag between the start and end of write operations',
|
||||
CORE_LABELS,
|
||||
buckets=[0.01, 0.05, 0.1, 0.2, 0.5, 1.0, 2.0, 5.0, 10.0],
|
||||
)
|
||||
|
||||
MODEL_READ_COUNT = Counter(
|
||||
'laborious_model_read_count',
|
||||
'Number of reads from the model',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_WRITE_COUNT = Counter(
|
||||
'laborious_model_write_count',
|
||||
'Number of writes to the model',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_READ_ERROR_COUNT = Counter(
|
||||
'laborious_model_read_error_count',
|
||||
'Number of errors reading from the model',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_WRITE_ERROR_COUNT = Counter(
|
||||
'laborious_model_write_error_count',
|
||||
'Number of errors writing to the model',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_ANALYZE_LAG = Histogram(
|
||||
'laborious_model_analyze_lag',
|
||||
'Lag between the start and end of analyze operations',
|
||||
CORE_LABELS,
|
||||
buckets=[0.01, 0.05, 0.1, 0.2, 0.5, 1.0, 2.0, 5.0, 10.0],
|
||||
)
|
||||
|
||||
MODEL_ANALYZE_COUNT = Counter(
|
||||
'laborious_model_analyze_count',
|
||||
'Number of analyze operations',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_ANALYZE_ERROR_COUNT = Counter(
|
||||
'laborious_model_analyze_error_count',
|
||||
'Number of errors during analyze operations',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
|
||||
# ================== Model import metrics ==================
|
||||
#
|
||||
# The failing step and the error code travel in `operation_type`, the one label the shared
|
||||
# `CORE_LABELS` leaves free. Nothing else about a failure is a label: an error reason is a sentence
|
||||
# and an exception is a log line, neither of which belongs in a metric's cardinality.
|
||||
|
||||
MODEL_IMPORT_STARTED_COUNT = Counter(
|
||||
'laborious_model_import_started_count',
|
||||
'Number of model imports that claimed their import log row',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_IMPORT_COMPLETED_COUNT = Counter(
|
||||
'laborious_model_import_completed_count',
|
||||
'Number of model imports that reached a registered version and a model document',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_IMPORT_ERROR_COUNT = Counter(
|
||||
'laborious_model_import_error_count',
|
||||
'Number of failed model imports, with the failing step or error code in operation_type',
|
||||
CORE_LABELS,
|
||||
)
|
||||
|
||||
MODEL_IMPORT_KDF_DURATION = Histogram(
|
||||
'laborious_model_import_kdf_duration_seconds',
|
||||
'Time spent deriving the bundle key with Argon2id',
|
||||
CORE_LABELS,
|
||||
buckets=[0.5, 1.0, 2.0, 3.0, 5.0, 8.0, 13.0, 21.0],
|
||||
)
|
||||
|
||||
MODEL_IMPORT_STEP_DURATION = Histogram(
|
||||
'laborious_model_import_step_duration_seconds',
|
||||
'Duration of each model import step, named in operation_type',
|
||||
CORE_LABELS,
|
||||
buckets=[0.1, 0.5, 1.0, 5.0, 10.0, 30.0, 60.0, 300.0],
|
||||
)
|
||||
|
||||
|
||||
# ================== PI Web API metrics ==================
|
||||
|
||||
PI_WEB_API_LABELS = [*CORE_LABELS, 'tag_name']
|
||||
|
||||
PI_WEB_API_PREDICTION_WRITTEN_COUNT = Counter(
|
||||
'laborious_pi_web_api_prediction_written_count',
|
||||
'Number of predictions written to the PI Web API',
|
||||
PI_WEB_API_LABELS,
|
||||
)
|
||||
|
||||
PI_WEB_API_PREDICTION_WRITTEN_ERROR_COUNT = Counter(
|
||||
'laborious_pi_web_api_prediction_written_error_count',
|
||||
'Number of errors writing predictions to the PI Web API',
|
||||
PI_WEB_API_LABELS,
|
||||
)
|
||||
0
laborious/utils/__init__.py
Normal file
0
laborious/utils/__init__.py
Normal file
27
laborious/utils/bundle/__init__.py
Normal file
27
laborious/utils/bundle/__init__.py
Normal file
@@ -0,0 +1,27 @@
|
||||
"""Reading `.sientia` bundles: the wire format, the seven gates and the step vocabulary.
|
||||
|
||||
There is no writer here. The producer is the Streamlit app in `sientia-projects-templates`
|
||||
(`app/src/operations/model_export/`), and a second production writer for a format with one producer
|
||||
would be a fork waiting to happen. What stands in for it in the tests is
|
||||
`tests/helpers/bundle_factory.py` plus the golden fixtures under `tests/fixtures/bundle/`.
|
||||
"""
|
||||
|
||||
from laborious.utils.bundle.format import BundleFormatError, BundleHeader
|
||||
from laborious.utils.bundle.reader import (
|
||||
BundleGateError,
|
||||
BundleLimits,
|
||||
BundleReader,
|
||||
OpenedBundle,
|
||||
)
|
||||
from laborious.utils.bundle.steps import GATE_TO_STEP, ImportStep
|
||||
|
||||
__all__ = [
|
||||
'GATE_TO_STEP',
|
||||
'BundleFormatError',
|
||||
'BundleGateError',
|
||||
'BundleHeader',
|
||||
'BundleLimits',
|
||||
'BundleReader',
|
||||
'ImportStep',
|
||||
'OpenedBundle',
|
||||
]
|
||||
216
laborious/utils/bundle/format.py
Normal file
216
laborious/utils/bundle/format.py
Normal file
@@ -0,0 +1,216 @@
|
||||
"""The `.sientia` wire format, as the producer writes it.
|
||||
|
||||
Every constant here is copied from the producer that emits the bundles this reader opens — the
|
||||
Streamlit app in `sientia-projects-templates`, modules
|
||||
`app/src/operations/model_export/crypto.py` and `app/src/operations/model_export/bundle.py`. The
|
||||
producer file each value came from is named next to it. The golden fixtures under
|
||||
`tests/fixtures/bundle/` are the anti-drift device: if the producer's layout moves, the tests here
|
||||
fail against the committed bytes instead of failing in production.
|
||||
|
||||
This module deliberately imports nothing from Laborious, Temporal, MLflow or libsodium: it is pure
|
||||
`struct` and `hashlib` over bytes, so it stays liftable into a shared package if the format ever
|
||||
gets one (the cancelled QTZPOC-15). `reader.py` is where the crypto lives.
|
||||
"""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
import hashlib
|
||||
import struct
|
||||
from dataclasses import dataclass
|
||||
from pathlib import Path
|
||||
from typing import Final
|
||||
|
||||
# --- Producer: app/src/operations/model_export/crypto.py ---
|
||||
MAGIC: Final[bytes] = b'SIENTIA1'
|
||||
FORMAT_VERSION: Final[int] = 1
|
||||
AEAD_ID_XCHACHA20POLY1305_SECRETSTREAM: Final[int] = 1
|
||||
KDF_ID_ARGON2ID: Final[int] = 1
|
||||
SALT_SIZE: Final[int] = 16
|
||||
DIGEST_SIZE: Final[int] = 32
|
||||
RESERVED_SIGNATURE_SIZE: Final[int] = 64
|
||||
# `KDF_MEMLIMIT_BYTES` / `KDF_OPSLIMIT` on the producer: what it writes is also the ceiling the
|
||||
# reader refuses to exceed, so header bytes cannot buy an arbitrary allocation on the worker.
|
||||
MAX_KDF_MEMLIMIT: Final[int] = 256 * 1024 * 1024 # 268435456
|
||||
MAX_KDF_OPSLIMIT: Final[int] = 3
|
||||
# `KDF_PARALLELISM_RESERVED`: libsodium's `crypto_pwhash` has no lane parameter, so the field is
|
||||
# reserved and must be exactly 1.
|
||||
PARALLELISM: Final[int] = 1
|
||||
CHUNK_SIZE: Final[int] = 64 * 1024 # 65536, fixed by the format
|
||||
KEY_SIZE: Final[int] = 32 # crypto_secretstream_xchacha20poly1305_KEYBYTES
|
||||
|
||||
# magic(8s) version(B) aead_id(B) kdf_id(B) salt(16s) memlimit(Q) opslimit(Q)
|
||||
# parallelism(B) digest(32s) reserved_signature(64s) — producer's `_HEADER_STRUCT`.
|
||||
HEADER_STRUCT: Final[struct.Struct] = struct.Struct('>8sBBB16sQQB32s64s')
|
||||
HEADER_SIZE: Final[int] = HEADER_STRUCT.size # 140
|
||||
|
||||
# --- libsodium constants the framing depends on ---
|
||||
# Not producer constants, but constants of the primitive the producer uses. Kept as literals so
|
||||
# this module stays import-free; `tests/laborious/utils/bundle/test_format.py` asserts they equal
|
||||
# the values `nacl.bindings` reports, which is what makes the literals safe.
|
||||
STREAM_HEADER_SIZE: Final[int] = 24 # crypto_secretstream_xchacha20poly1305_HEADERBYTES
|
||||
ABYTES: Final[int] = 17 # crypto_secretstream_xchacha20poly1305_ABYTES
|
||||
|
||||
# The pre-upload check prefix of `08-security-and-encryption.md` § 5.3: enough bytes to hold the
|
||||
# header, the stream header and one full chunk. Derived from constants, never read from the file.
|
||||
PREFIX_SIZE: Final[int] = HEADER_SIZE + STREAM_HEADER_SIZE + CHUNK_SIZE + ABYTES # 65717
|
||||
|
||||
# The digest covers the chunk stream only. The producer computes `sha256(ciphertext)` over the
|
||||
# joined chunks and *then* writes `header + stream_header + ciphertext`, so on disk the covered
|
||||
# range starts after both headers. Verified against a bundle produced by the producer's own code:
|
||||
# `sha256(file[164:])` matches the header field and `sha256(file[140:])` does not.
|
||||
DIGEST_OFFSET: Final[int] = HEADER_SIZE + STREAM_HEADER_SIZE # 164
|
||||
|
||||
MIN_FILE_SIZE: Final[int] = HEADER_SIZE + STREAM_HEADER_SIZE
|
||||
|
||||
SUPPORTED_FORMAT_VERSIONS: Final[frozenset[int]] = frozenset({FORMAT_VERSION})
|
||||
SUPPORTED_AEAD_IDS: Final[frozenset[int]] = frozenset({AEAD_ID_XCHACHA20POLY1305_SECRETSTREAM})
|
||||
SUPPORTED_KDF_IDS: Final[frozenset[int]] = frozenset({KDF_ID_ARGON2ID})
|
||||
|
||||
_HASH_BLOCK_SIZE: Final[int] = 1024 * 1024
|
||||
|
||||
|
||||
class BundleFormatError(Exception):
|
||||
"""The bytes are not a `.sientia` bundle this reader implements.
|
||||
|
||||
Raised for every header-level rejection: wrong magic, unknown version, unknown primitive ids,
|
||||
cost parameters above the ceiling, a reserved field carrying a value, a file too short to hold
|
||||
a header, or a chunk stream whose digest does not match the header's. `reader.py` turns this
|
||||
into a gate-2 rejection; nothing here knows about gates or import steps.
|
||||
"""
|
||||
|
||||
|
||||
@dataclass(frozen=True)
|
||||
class BundleHeader:
|
||||
"""The 140-byte plaintext header, parsed and validated."""
|
||||
|
||||
format_version: int
|
||||
aead_id: int
|
||||
kdf_id: int
|
||||
salt: bytes
|
||||
kdf_memlimit_bytes: int
|
||||
kdf_opslimit: int
|
||||
kdf_parallelism: int
|
||||
ciphertext_digest: bytes
|
||||
reserved_signature: bytes
|
||||
|
||||
|
||||
def parse_header(raw: bytes) -> BundleHeader:
|
||||
"""Parse and validate the plaintext header.
|
||||
|
||||
Everything the reader trusts about the file's shape is decided here, before any offset past
|
||||
the header is used and before a key is derived.
|
||||
|
||||
Args:
|
||||
raw: at least `HEADER_SIZE` bytes read from the start of the object.
|
||||
|
||||
Returns:
|
||||
BundleHeader: the validated header.
|
||||
|
||||
Raises:
|
||||
BundleFormatError: on any invalid or unsupported field.
|
||||
"""
|
||||
if len(raw) < HEADER_SIZE:
|
||||
raise BundleFormatError(
|
||||
f'file is shorter than the {HEADER_SIZE}-byte header ({len(raw)} bytes available)'
|
||||
)
|
||||
|
||||
(
|
||||
magic,
|
||||
format_version,
|
||||
aead_id,
|
||||
kdf_id,
|
||||
salt,
|
||||
kdf_memlimit_bytes,
|
||||
kdf_opslimit,
|
||||
kdf_parallelism,
|
||||
ciphertext_digest,
|
||||
reserved_signature,
|
||||
) = HEADER_STRUCT.unpack(raw[:HEADER_SIZE])
|
||||
|
||||
if magic != MAGIC:
|
||||
raise BundleFormatError('file does not start with the expected bundle marker')
|
||||
if format_version not in SUPPORTED_FORMAT_VERSIONS:
|
||||
raise BundleFormatError(f'unsupported bundle format version: {format_version}')
|
||||
if aead_id not in SUPPORTED_AEAD_IDS:
|
||||
raise BundleFormatError(f'unsupported encryption identifier: {aead_id}')
|
||||
if kdf_id not in SUPPORTED_KDF_IDS:
|
||||
raise BundleFormatError(f'unsupported key derivation identifier: {kdf_id}')
|
||||
if kdf_memlimit_bytes > MAX_KDF_MEMLIMIT:
|
||||
raise BundleFormatError(
|
||||
f'declared key derivation memory {kdf_memlimit_bytes} exceeds the '
|
||||
f'{MAX_KDF_MEMLIMIT} ceiling'
|
||||
)
|
||||
if kdf_opslimit > MAX_KDF_OPSLIMIT:
|
||||
raise BundleFormatError(
|
||||
f'declared key derivation passes {kdf_opslimit} exceeds the {MAX_KDF_OPSLIMIT} ceiling'
|
||||
)
|
||||
if kdf_memlimit_bytes <= 0 or kdf_opslimit <= 0:
|
||||
raise BundleFormatError('key derivation parameters must be positive')
|
||||
if kdf_parallelism != PARALLELISM:
|
||||
raise BundleFormatError(
|
||||
f'reserved parallelism field must be {PARALLELISM}, found {kdf_parallelism}'
|
||||
)
|
||||
if reserved_signature != bytes(RESERVED_SIGNATURE_SIZE):
|
||||
raise BundleFormatError('reserved signature field must be empty in this format version')
|
||||
|
||||
return BundleHeader(
|
||||
format_version=format_version,
|
||||
aead_id=aead_id,
|
||||
kdf_id=kdf_id,
|
||||
salt=salt,
|
||||
kdf_memlimit_bytes=kdf_memlimit_bytes,
|
||||
kdf_opslimit=kdf_opslimit,
|
||||
kdf_parallelism=kdf_parallelism,
|
||||
ciphertext_digest=ciphertext_digest,
|
||||
reserved_signature=reserved_signature,
|
||||
)
|
||||
|
||||
|
||||
def read_header(path: Path | str) -> BundleHeader:
|
||||
"""Read and validate the header of the file at `path`.
|
||||
|
||||
Raises:
|
||||
BundleFormatError: when the file cannot hold a header plus a stream header, or when the
|
||||
header itself is invalid.
|
||||
"""
|
||||
file_path = Path(path)
|
||||
size = file_path.stat().st_size
|
||||
if size < MIN_FILE_SIZE:
|
||||
raise BundleFormatError(
|
||||
f'file is {size} bytes, smaller than the {MIN_FILE_SIZE} bytes a bundle needs for its '
|
||||
'header and encrypted stream header'
|
||||
)
|
||||
with file_path.open('rb') as handle:
|
||||
return parse_header(handle.read(HEADER_SIZE))
|
||||
|
||||
|
||||
def compute_ciphertext_digest(path: Path | str) -> bytes:
|
||||
"""SHA-256 of the chunk stream — the bytes from `DIGEST_OFFSET` to the end of the file."""
|
||||
digest = hashlib.sha256()
|
||||
with Path(path).open('rb') as handle:
|
||||
handle.seek(DIGEST_OFFSET)
|
||||
while block := handle.read(_HASH_BLOCK_SIZE):
|
||||
digest.update(block)
|
||||
return digest.digest()
|
||||
|
||||
|
||||
def verify_ciphertext_digest(path: Path | str, header: BundleHeader) -> None:
|
||||
"""Compare the file's chunk-stream digest against the header's.
|
||||
|
||||
Raises:
|
||||
BundleFormatError: when they differ — a truncated, overwritten or corrupted transfer. This
|
||||
runs before any key derivation, so a damaged file never costs an Argon2id pass.
|
||||
"""
|
||||
if compute_ciphertext_digest(path) != header.ciphertext_digest:
|
||||
raise BundleFormatError(
|
||||
'the encrypted content does not match the digest recorded in the bundle header'
|
||||
)
|
||||
|
||||
|
||||
def file_digest(path: Path | str) -> str:
|
||||
"""Hex SHA-256 of the whole file, for the `expected_digest` comparison of gate 1."""
|
||||
digest = hashlib.sha256()
|
||||
with Path(path).open('rb') as handle:
|
||||
while block := handle.read(_HASH_BLOCK_SIZE):
|
||||
digest.update(block)
|
||||
return digest.hexdigest()
|
||||
473
laborious/utils/bundle/reader.py
Normal file
473
laborious/utils/bundle/reader.py
Normal file
@@ -0,0 +1,473 @@
|
||||
"""Reading a `.sientia` bundle: the seven gates, in order, in one function.
|
||||
|
||||
`BundleReader.open()` is the only entry point. Gate ordering is a property of that function rather
|
||||
than of the caller, so it cannot be reordered by accident and can be unit-tested without Temporal:
|
||||
|
||||
1. object-level limits (`check_object_limits`, called by the download activity before the body is
|
||||
fetched — the only gate that does not need the file)
|
||||
2. header validation, including the chunk-stream digest, before any key derivation
|
||||
3. AEAD decryption — the integrity check; a wrong password and a tampered file fail identically
|
||||
4. archive inspection over the central directory, writing nothing to disk
|
||||
5. extraction into a fresh, isolated directory
|
||||
6. structure and schema of the extracted tree
|
||||
7. content policy over the file set
|
||||
|
||||
Nothing here logs, notifies or emits a metric: rejections are raised as `BundleGateError` and the
|
||||
activity layer owns the one failure channel.
|
||||
"""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
import json
|
||||
import os
|
||||
import shutil
|
||||
import stat
|
||||
import time
|
||||
import unicodedata
|
||||
import zipfile
|
||||
from dataclasses import dataclass, field
|
||||
from pathlib import Path
|
||||
from typing import Any
|
||||
|
||||
import nacl.bindings as sodium
|
||||
import nacl.exceptions
|
||||
|
||||
from laborious.utils.bundle import format as fmt
|
||||
from laborious.utils.bundle.steps import GATE_TO_STEP, ImportStep
|
||||
|
||||
# Gate 6 — the layout `bundle.build_zip` writes and `model_repository.py` reads back.
|
||||
METADATA_FILE_NAME = 'metadata.json'
|
||||
ARTIFACTS_DIR_NAME = 'artifacts'
|
||||
REQUIRED_TOP_LEVEL_KEYS = frozenset({'parameters', 'metadata'})
|
||||
REQUIRED_METADATA_FIELDS = (
|
||||
'model_name',
|
||||
'experiment_name',
|
||||
'run_id',
|
||||
'model_version',
|
||||
'model_project',
|
||||
'export_timestamp',
|
||||
)
|
||||
REQUIRED_PARAMETERS = ('target_variable',)
|
||||
REQUIRED_MODEL_DIRS = ('prediction_model', 'data_model')
|
||||
REQUIRED_MODEL_FILES = ('MLmodel', 'model.pkl')
|
||||
|
||||
# The import record's `experiment_name` column is `VARCHAR(50)` with a length-3 floor, and the name
|
||||
# is written onto the record before provisioning starts — so the column's limits are enforced here,
|
||||
# not three activities later as a constraint violation.
|
||||
EXPERIMENT_NAME_MIN_LENGTH = 3
|
||||
EXPERIMENT_NAME_MAX_LENGTH = 50
|
||||
|
||||
# Gate 7 — an MLflow 2.x artifact tree for this platform: the model directories' known files, the
|
||||
# model card, the CSVs the training template logs and the bundle's own metadata.
|
||||
ALLOWED_FILE_NAMES = frozenset(
|
||||
{
|
||||
'MLmodel',
|
||||
'metadata.json',
|
||||
'model.pkl',
|
||||
'conda.yaml',
|
||||
'python_env.yaml',
|
||||
'requirements.txt',
|
||||
'model_card.json',
|
||||
'model_card.svg',
|
||||
}
|
||||
)
|
||||
ALLOWED_FILE_SUFFIXES = frozenset({'.csv', '.json', '.yaml', '.yml', '.txt', '.pkl', '.svg', '.md'})
|
||||
|
||||
_DECRYPT_FAILURE_MESSAGE = (
|
||||
'could not open this bundle: wrong password, or the file is damaged or was altered'
|
||||
)
|
||||
|
||||
|
||||
class BundleGateError(Exception):
|
||||
"""A gate rejected the bundle.
|
||||
|
||||
Carries the gate number and the import step that gate maps onto, so the workflow never has to
|
||||
guess which step to record.
|
||||
"""
|
||||
|
||||
def __init__(self, message: str, *, gate: int, step: ImportStep | None = None) -> None:
|
||||
super().__init__(message)
|
||||
self.gate = gate
|
||||
self.step = step if step is not None else GATE_TO_STEP[gate]
|
||||
|
||||
|
||||
@dataclass(frozen=True)
|
||||
class BundleLimits:
|
||||
"""Ceilings enforced by gates 1 and 4. Values come from `build_import_config()`."""
|
||||
|
||||
max_object_bytes: int = 1024 * 1024 * 1024
|
||||
max_entries: int = 5000
|
||||
max_uncompressed_bytes: int = 4 * 1024 * 1024 * 1024
|
||||
max_compression_ratio: float = 200.0
|
||||
object_prefix: str = 'imported_models/'
|
||||
object_suffix: str = '.sientia'
|
||||
|
||||
|
||||
@dataclass(frozen=True)
|
||||
class OpenedBundle:
|
||||
"""What a bundle yields once every gate has passed. Nothing secret is carried."""
|
||||
|
||||
extracted_dir: Path
|
||||
metadata: dict[str, Any] = field(default_factory=dict)
|
||||
parameters: dict[str, Any] = field(default_factory=dict)
|
||||
digest: str = ''
|
||||
header: fmt.BundleHeader | None = None
|
||||
# How long Argon2id took, so the worker's most expensive step is measurable without the
|
||||
# activity layer having to reach inside the reader.
|
||||
kdf_seconds: float = 0.0
|
||||
|
||||
|
||||
class BundleReader:
|
||||
"""Opens `.sientia` bundles produced by the exporter in `sientia-projects-templates`."""
|
||||
|
||||
def __init__(self, limits: BundleLimits | None = None) -> None:
|
||||
self.limits = limits or BundleLimits()
|
||||
|
||||
# ------------------------------------------------------------------ gate 1
|
||||
|
||||
def check_object_limits(self, *, size: int, key: str) -> None:
|
||||
"""Gate 1, object level: reject before the object's body is fetched.
|
||||
|
||||
Args:
|
||||
size: the object's size as reported by `stat_object`.
|
||||
key: the object key.
|
||||
|
||||
Raises:
|
||||
BundleGateError: oversized object, key outside the import prefix, or wrong suffix.
|
||||
"""
|
||||
if size > self.limits.max_object_bytes:
|
||||
raise BundleGateError(
|
||||
f'uploaded object is {size} bytes, above the '
|
||||
f'{self.limits.max_object_bytes} byte limit',
|
||||
gate=1,
|
||||
)
|
||||
if size <= 0:
|
||||
raise BundleGateError('uploaded object is empty', gate=1)
|
||||
if not key.startswith(self.limits.object_prefix):
|
||||
raise BundleGateError('uploaded object is not under the import prefix', gate=1)
|
||||
if not key.endswith(self.limits.object_suffix):
|
||||
raise BundleGateError(
|
||||
f'uploaded object does not end in {self.limits.object_suffix}', gate=1
|
||||
)
|
||||
|
||||
# --------------------------------------------------------------------- open
|
||||
|
||||
def open(
|
||||
self,
|
||||
encrypted_path: Path | str,
|
||||
password: str,
|
||||
extract_root: Path | str,
|
||||
work_dir: Path | str | None = None,
|
||||
) -> OpenedBundle:
|
||||
"""Run gates 2 to 7 in order and return the opened bundle.
|
||||
|
||||
Args:
|
||||
encrypted_path: the downloaded `.sientia` file.
|
||||
password: the plaintext bundle password. Never stored, never logged, never returned.
|
||||
extract_root: the directory to extract into. It MUST NOT exist yet (gate 5).
|
||||
work_dir: where the decrypted zip is written. Defaults to `extract_root`'s parent.
|
||||
|
||||
Returns:
|
||||
OpenedBundle: extracted tree, `metadata`, `parameters`, digest and header.
|
||||
|
||||
Raises:
|
||||
BundleGateError: with the gate that rejected the bundle and its import step.
|
||||
"""
|
||||
encrypted = Path(encrypted_path)
|
||||
root = Path(extract_root)
|
||||
staging = Path(work_dir) if work_dir is not None else root.parent
|
||||
|
||||
header = self._gate_2_header(encrypted)
|
||||
zip_path, kdf_seconds = self._gate_3_decrypt(encrypted, password, header, staging)
|
||||
try:
|
||||
self._gate_4_inspect(zip_path)
|
||||
self._gate_5_extract(zip_path, root)
|
||||
metadata, parameters = self._gate_6_structure(root)
|
||||
self._gate_7_content_policy(root)
|
||||
except BaseException:
|
||||
# A rejection after decryption leaves nothing extracted behind (gate 5's contract) and
|
||||
# never leaves a decrypted zip on the worker for the next import to trip over.
|
||||
shutil.rmtree(root, ignore_errors=True)
|
||||
zip_path.unlink(missing_ok=True)
|
||||
raise
|
||||
zip_path.unlink(missing_ok=True)
|
||||
|
||||
return OpenedBundle(
|
||||
extracted_dir=root,
|
||||
metadata=metadata,
|
||||
parameters=parameters,
|
||||
digest=header.ciphertext_digest.hex(),
|
||||
header=header,
|
||||
kdf_seconds=kdf_seconds,
|
||||
)
|
||||
|
||||
# ------------------------------------------------------------------ gate 2
|
||||
|
||||
def _gate_2_header(self, encrypted: Path) -> fmt.BundleHeader:
|
||||
"""Parse the header and check the chunk-stream digest, before deriving anything."""
|
||||
try:
|
||||
header = fmt.read_header(encrypted)
|
||||
fmt.verify_ciphertext_digest(encrypted, header)
|
||||
except fmt.BundleFormatError as error:
|
||||
raise BundleGateError(str(error), gate=2) from error
|
||||
except OSError as error:
|
||||
raise BundleGateError('downloaded bundle could not be read', gate=2) from error
|
||||
return header
|
||||
|
||||
# ------------------------------------------------------------------ gate 3
|
||||
|
||||
def _gate_3_decrypt(
|
||||
self, encrypted: Path, password: str, header: fmt.BundleHeader, staging: Path
|
||||
) -> tuple[Path, float]:
|
||||
"""Derive the key with the header's parameters and decrypt the stream to a file.
|
||||
|
||||
The AEAD *is* the integrity check: a wrong password and a tampered byte fail here with the
|
||||
same message, which never claims to distinguish them.
|
||||
"""
|
||||
staging.mkdir(parents=True, exist_ok=True)
|
||||
zip_path = staging / 'bundle.zip'
|
||||
try:
|
||||
started = time.monotonic()
|
||||
key = self._derive_key(password, header)
|
||||
kdf_seconds = time.monotonic() - started
|
||||
self._pull_stream(encrypted, key, zip_path)
|
||||
except BundleGateError:
|
||||
zip_path.unlink(missing_ok=True)
|
||||
raise
|
||||
except (nacl.exceptions.CryptoError, ValueError, RuntimeError) as error:
|
||||
zip_path.unlink(missing_ok=True)
|
||||
raise BundleGateError(_DECRYPT_FAILURE_MESSAGE, gate=3) from error
|
||||
except OSError as error:
|
||||
zip_path.unlink(missing_ok=True)
|
||||
raise BundleGateError('decrypted bundle could not be written', gate=3) from error
|
||||
return zip_path, kdf_seconds
|
||||
|
||||
@staticmethod
|
||||
def _derive_key(password: str, header: fmt.BundleHeader) -> bytes:
|
||||
"""Argon2id over the NFC-normalised password, with the header's own cost parameters.
|
||||
|
||||
The password is normalised and **not** trimmed, matching the producer's `_derive_key`: the
|
||||
same password typed on another OS must derive the same key, while a trailing space is part
|
||||
of the secret.
|
||||
"""
|
||||
normalized = unicodedata.normalize('NFC', password)
|
||||
return sodium.crypto_pwhash_alg(
|
||||
fmt.KEY_SIZE,
|
||||
normalized.encode('utf-8'),
|
||||
header.salt,
|
||||
header.kdf_opslimit,
|
||||
header.kdf_memlimit_bytes,
|
||||
sodium.crypto_pwhash_ALG_ARGON2ID13,
|
||||
)
|
||||
|
||||
@staticmethod
|
||||
def _pull_stream(encrypted: Path, key: bytes, zip_path: Path) -> None:
|
||||
"""Decrypt the chunk stream into `zip_path`, requiring the FINAL tag."""
|
||||
chunk_size = fmt.CHUNK_SIZE + fmt.ABYTES
|
||||
state = sodium.crypto_secretstream_xchacha20poly1305_state()
|
||||
with encrypted.open('rb') as source, zip_path.open('wb') as target:
|
||||
source.seek(fmt.HEADER_SIZE)
|
||||
stream_header = source.read(fmt.STREAM_HEADER_SIZE)
|
||||
sodium.crypto_secretstream_xchacha20poly1305_init_pull(state, stream_header, key)
|
||||
last_tag: int | None = None
|
||||
while chunk := source.read(chunk_size):
|
||||
plaintext, last_tag = sodium.crypto_secretstream_xchacha20poly1305_pull(
|
||||
state, chunk
|
||||
)
|
||||
target.write(plaintext)
|
||||
if last_tag != sodium.crypto_secretstream_xchacha20poly1305_TAG_FINAL:
|
||||
# A stream that stops without its FINAL tag was cut short. The digest already catches
|
||||
# truncation of a stored file; this catches a stream that was framed to look complete.
|
||||
raise BundleGateError(_DECRYPT_FAILURE_MESSAGE, gate=3)
|
||||
|
||||
# ------------------------------------------------------------------ gate 4
|
||||
|
||||
def _gate_4_inspect(self, zip_path: Path) -> None:
|
||||
"""Inspect the central directory only. Nothing is written to disk by this gate."""
|
||||
try:
|
||||
with zipfile.ZipFile(zip_path) as archive:
|
||||
entries = archive.infolist()
|
||||
except zipfile.BadZipFile as error:
|
||||
raise BundleGateError('bundle content is not a readable archive', gate=4) from error
|
||||
|
||||
if len(entries) > self.limits.max_entries:
|
||||
raise BundleGateError(
|
||||
f'archive declares {len(entries)} entries, above the '
|
||||
f'{self.limits.max_entries} limit',
|
||||
gate=4,
|
||||
)
|
||||
if not entries:
|
||||
raise BundleGateError('archive is empty', gate=4)
|
||||
|
||||
uncompressed = sum(entry.file_size for entry in entries)
|
||||
compressed = sum(entry.compress_size for entry in entries)
|
||||
if uncompressed > self.limits.max_uncompressed_bytes:
|
||||
raise BundleGateError(
|
||||
f'archive declares {uncompressed} uncompressed bytes, above the '
|
||||
f'{self.limits.max_uncompressed_bytes} limit',
|
||||
gate=4,
|
||||
)
|
||||
ratio = uncompressed / max(compressed, 1)
|
||||
if ratio > self.limits.max_compression_ratio:
|
||||
raise BundleGateError(
|
||||
f'archive compression ratio {ratio:.1f} is above the '
|
||||
f'{self.limits.max_compression_ratio} limit',
|
||||
gate=4,
|
||||
)
|
||||
|
||||
for entry in entries:
|
||||
self._check_entry_name(entry.filename)
|
||||
self._check_entry_mode(entry)
|
||||
|
||||
@staticmethod
|
||||
def _check_entry_name(name: str) -> None:
|
||||
"""Reject absolute names and traversal, from the declared name alone."""
|
||||
normalised = name.replace('\\', '/')
|
||||
if normalised.startswith('/') or (len(normalised) > 1 and normalised[1] == ':'):
|
||||
raise BundleGateError('archive declares an absolute entry path', gate=4)
|
||||
if any(part == '..' for part in normalised.split('/')):
|
||||
raise BundleGateError('archive declares an entry escaping its own tree', gate=4)
|
||||
|
||||
@staticmethod
|
||||
def _check_entry_mode(entry: zipfile.ZipInfo) -> None:
|
||||
"""Reject symlinks and anything that is neither a regular file nor a directory."""
|
||||
mode = entry.external_attr >> 16
|
||||
if stat.S_IFMT(mode) == 0:
|
||||
# No file-type bits stored. This is the normal case for two kinds of entry: a zip
|
||||
# written by a tool that records no Unix mode at all (`mode == 0`), and
|
||||
# `ZipFile.writestr`, which stores permissions only — the producer's `metadata.json`
|
||||
# arrives as `0o600 << 16`. Nothing to check: the member is extracted as a plain file
|
||||
# with the worker's own permissions either way.
|
||||
return
|
||||
if stat.S_ISLNK(mode):
|
||||
raise BundleGateError('archive declares a symbolic link', gate=4)
|
||||
if not (stat.S_ISREG(mode) or stat.S_ISDIR(mode)):
|
||||
raise BundleGateError('archive declares an entry that is not a regular file', gate=4)
|
||||
|
||||
# ------------------------------------------------------------------ gate 5
|
||||
|
||||
def _gate_5_extract(self, zip_path: Path, root: Path) -> None:
|
||||
"""Extract into a fresh directory, containing every member by resolved path.
|
||||
|
||||
A pre-existing extraction root is a failure rather than something to clear: it means
|
||||
another import, or a previous attempt, owns that path.
|
||||
"""
|
||||
if root.exists():
|
||||
raise BundleGateError('extraction directory already exists', gate=5)
|
||||
root.mkdir(parents=True)
|
||||
resolved_root = root.resolve()
|
||||
try:
|
||||
with zipfile.ZipFile(zip_path) as archive:
|
||||
for entry in archive.infolist():
|
||||
self._extract_member(archive, entry, root, resolved_root)
|
||||
except BundleGateError:
|
||||
shutil.rmtree(root, ignore_errors=True)
|
||||
raise
|
||||
except (OSError, zipfile.BadZipFile) as error:
|
||||
shutil.rmtree(root, ignore_errors=True)
|
||||
raise BundleGateError('bundle content could not be unpacked', gate=5) from error
|
||||
|
||||
@staticmethod
|
||||
def _extract_member(
|
||||
archive: zipfile.ZipFile, entry: zipfile.ZipInfo, root: Path, resolved_root: Path
|
||||
) -> None:
|
||||
"""Write one member, re-checking containment on the resolved path."""
|
||||
name = entry.filename.replace('\\', '/')
|
||||
target = root / name
|
||||
resolved = Path(os.path.realpath(target))
|
||||
if resolved != resolved_root and resolved_root not in resolved.parents:
|
||||
raise BundleGateError('archive member resolves outside the extraction root', gate=5)
|
||||
if entry.is_dir():
|
||||
resolved.mkdir(parents=True, exist_ok=True)
|
||||
return
|
||||
if resolved.exists():
|
||||
raise BundleGateError('archive member would overwrite an existing file', gate=5)
|
||||
resolved.parent.mkdir(parents=True, exist_ok=True)
|
||||
# Written as a plain file: the archive's stored permissions are never restored, so no
|
||||
# member can arrive executable.
|
||||
with archive.open(entry) as source, resolved.open('wb') as sink:
|
||||
shutil.copyfileobj(source, sink)
|
||||
|
||||
# ------------------------------------------------------------------ gate 6
|
||||
|
||||
def _gate_6_structure(self, root: Path) -> tuple[dict[str, Any], dict[str, Any]]:
|
||||
"""Validate the extracted layout and the metadata schema."""
|
||||
metadata_path = root / METADATA_FILE_NAME
|
||||
artifacts_dir = root / ARTIFACTS_DIR_NAME
|
||||
if not metadata_path.is_file():
|
||||
raise BundleGateError('bundle has no metadata document at its root', gate=6)
|
||||
if not artifacts_dir.is_dir():
|
||||
raise BundleGateError('bundle has no artifacts directory', gate=6)
|
||||
|
||||
document = self._load_metadata_document(metadata_path)
|
||||
metadata = document['metadata']
|
||||
parameters = document['parameters']
|
||||
|
||||
self._check_metadata_fields(metadata)
|
||||
self._check_parameters(parameters)
|
||||
self._check_model_directories(artifacts_dir)
|
||||
return metadata, parameters
|
||||
|
||||
@staticmethod
|
||||
def _load_metadata_document(metadata_path: Path) -> dict[str, Any]:
|
||||
"""Read `metadata.json` and check its two top-level keys."""
|
||||
try:
|
||||
document = json.loads(metadata_path.read_text(encoding='utf-8'))
|
||||
except (json.JSONDecodeError, UnicodeDecodeError, OSError) as error:
|
||||
raise BundleGateError('bundle metadata is not readable JSON', gate=6) from error
|
||||
if not isinstance(document, dict) or set(document) != REQUIRED_TOP_LEVEL_KEYS:
|
||||
raise BundleGateError(
|
||||
'bundle metadata does not carry exactly the parameters and metadata blocks', gate=6
|
||||
)
|
||||
if not isinstance(document['metadata'], dict) or not isinstance(
|
||||
document['parameters'], dict
|
||||
):
|
||||
raise BundleGateError('bundle metadata blocks are not objects', gate=6)
|
||||
return document
|
||||
|
||||
@staticmethod
|
||||
def _check_metadata_fields(metadata: dict[str, Any]) -> None:
|
||||
"""Every origin field the import records must be present and usable."""
|
||||
for field_name in REQUIRED_METADATA_FIELDS:
|
||||
value = metadata.get(field_name)
|
||||
if not isinstance(value, str) or not value.strip():
|
||||
raise BundleGateError(f'bundle metadata is missing the {field_name} field', gate=6)
|
||||
experiment_name = metadata['experiment_name']
|
||||
if not (EXPERIMENT_NAME_MIN_LENGTH <= len(experiment_name) <= EXPERIMENT_NAME_MAX_LENGTH):
|
||||
raise BundleGateError(
|
||||
"bundle experiment name does not fit the platform's limits", gate=6
|
||||
)
|
||||
|
||||
@staticmethod
|
||||
def _check_parameters(parameters: dict[str, Any]) -> None:
|
||||
"""`target_variable` is what `model_config.target` is built from; nothing else supplies it."""
|
||||
for name in REQUIRED_PARAMETERS:
|
||||
value = parameters.get(name)
|
||||
if value is None or not str(value).strip():
|
||||
raise BundleGateError(f'bundle parameters are missing {name}', gate=6)
|
||||
|
||||
@staticmethod
|
||||
def _check_model_directories(artifacts_dir: Path) -> None:
|
||||
"""`prediction_model` and `data_model` must each be a loadable MLflow model directory."""
|
||||
for directory in REQUIRED_MODEL_DIRS:
|
||||
model_dir = artifacts_dir / directory
|
||||
if not model_dir.is_dir():
|
||||
raise BundleGateError(f'bundle has no {directory} artifacts', gate=6)
|
||||
for required in REQUIRED_MODEL_FILES:
|
||||
if not (model_dir / required).is_file():
|
||||
raise BundleGateError(f'bundle {directory} artifacts are incomplete', gate=6)
|
||||
|
||||
# ------------------------------------------------------------------ gate 7
|
||||
|
||||
def _gate_7_content_policy(self, root: Path) -> None:
|
||||
"""Only the file kinds an MLflow artifact tree calls for may be present."""
|
||||
for path in sorted(root.rglob('*')):
|
||||
if path.is_dir():
|
||||
continue
|
||||
if not path.is_file():
|
||||
raise BundleGateError('bundle contains an entry that is not a file', gate=7)
|
||||
if path.name in ALLOWED_FILE_NAMES:
|
||||
continue
|
||||
if path.suffix.lower() in ALLOWED_FILE_SUFFIXES:
|
||||
continue
|
||||
raise BundleGateError('bundle contains a file a model export should not carry', gate=7)
|
||||
55
laborious/utils/bundle/steps.py
Normal file
55
laborious/utils/bundle/steps.py
Normal file
@@ -0,0 +1,55 @@
|
||||
"""The import pipeline's step vocabulary, and the gate-to-step mapping.
|
||||
|
||||
`ImportStep` is the join between three things: the machine-readable step written into the import
|
||||
record's JSON detail, the key of the error catalog (one code and one sentence per step) and the
|
||||
value the frontend switches on. It lives in the bundle package rather than in the activities module
|
||||
because the reader raises with it — `laborious/activities/model_import.py` imports it from here so
|
||||
there is exactly one definition.
|
||||
|
||||
It holds **pipeline** steps only. The two failures that are not steps of the pipeline — failing to
|
||||
claim the record and failing to write it — are reported by the failure channel under their own
|
||||
markers (`not_claimable`, `status_write`), deliberately outside this enum so the
|
||||
catalog-completeness test keeps meaning "every pipeline step has a sentence".
|
||||
"""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
from enum import StrEnum
|
||||
from typing import Final
|
||||
|
||||
|
||||
class ImportStep(StrEnum):
|
||||
"""Where an import stopped. Values are what gets written to the record."""
|
||||
|
||||
RECEIVED = 'received'
|
||||
DOWNLOAD = 'download'
|
||||
DECRYPTION = 'decryption'
|
||||
ARCHIVE_INSPECTION = 'archive_inspection'
|
||||
EXTRACTION = 'extraction'
|
||||
STRUCTURE_VALIDATION = 'structure_validation'
|
||||
CONTENT_POLICY = 'content_policy'
|
||||
EXPERIMENT_CREATION = 'experiment_creation'
|
||||
ARTIFACT_UPLOAD = 'artifact_upload'
|
||||
REGISTRATION = 'registration'
|
||||
MODEL_DOCUMENT = 'model_document'
|
||||
CLEANUP = 'cleanup'
|
||||
|
||||
|
||||
# The seven gates map onto the first seven steps, with gates 1 and 2 sharing one: both say "these
|
||||
# are not the bytes that were sent" — an object over the size ceiling, a key with the wrong shape, a
|
||||
# digest that disagrees with what the uploader computed, a wrong magic, an unsupported version, a
|
||||
# chunk stream that does not match the header's digest. The catalog's `download` sentence ("The
|
||||
# uploaded file could not be read, or it is not the file that was sent. Upload it again.") is true
|
||||
# for all of them, and none of them may borrow the `decryption` sentence, which implicates the
|
||||
# password.
|
||||
GATE_TO_STEP: Final[dict[int, ImportStep]] = {
|
||||
1: ImportStep.DOWNLOAD,
|
||||
2: ImportStep.DOWNLOAD,
|
||||
3: ImportStep.DECRYPTION,
|
||||
4: ImportStep.ARCHIVE_INSPECTION,
|
||||
5: ImportStep.EXTRACTION,
|
||||
6: ImportStep.STRUCTURE_VALIDATION,
|
||||
7: ImportStep.CONTENT_POLICY,
|
||||
}
|
||||
|
||||
GATE_COUNT: Final[int] = 7
|
||||
162
laborious/utils/connectors_config.py
Normal file
162
laborious/utils/connectors_config.py
Normal file
@@ -0,0 +1,162 @@
|
||||
import json
|
||||
import tempfile
|
||||
from os import getenv, path
|
||||
from typing import Any
|
||||
|
||||
|
||||
def build_mlflow_config() -> dict[str, Any]:
|
||||
"""
|
||||
Build MLFlow server configuration from environment variables.
|
||||
|
||||
This function constructs an MLFlow configuration dictionary from
|
||||
environment variables with sensible defaults for local development.
|
||||
It handles server connection and authentication parameters.
|
||||
|
||||
Environment Variables:
|
||||
MLFLOW_HOST: MLFlow server hostname (default: http://localhost)
|
||||
MLFLOW_PORT: MLFlow server port (default: 5080)
|
||||
MLFLOW_USERNAME: MLFlow username (default: aignosi)
|
||||
MLFLOW_PASSWORD: MLFlow password (default: aignosi)
|
||||
|
||||
Returns:
|
||||
dict: MLFlow configuration dictionary with all required parameters
|
||||
"""
|
||||
return {
|
||||
'host': getenv('MLFLOW_HOST', 'http://localhost'),
|
||||
'port': int(getenv('MLFLOW_PORT', '5080')),
|
||||
'username': getenv('MLFLOW_USERNAME', 'aignosi'),
|
||||
'password': getenv('MLFLOW_PASSWORD', 'aignosi'),
|
||||
}
|
||||
|
||||
|
||||
def build_opc_config() -> dict[str, Any]:
|
||||
"""
|
||||
Build OPC server configuration from environment variables.
|
||||
|
||||
This function constructs an OPC server configuration dictionary from
|
||||
environment variables. It supports both single server and multi-server
|
||||
configurations with flexible parameter handling.
|
||||
|
||||
Environment Variables:
|
||||
OPC_CONFIG: JSON string containing multiple OPC server configurations
|
||||
OPC_ID: OPC server ID (fallback, default: 1)
|
||||
OPC_URL: Single OPC server URL (fallback, default: opc.tcp://localhost:4840)
|
||||
OPC_SERVER_URI: Single OPC server URI (fallback, default: opc.tcp://localhost:4840)
|
||||
OPC_CERT_PATH: Client certificate path (fallback, default: None)
|
||||
OPC_PRIVATE_KEY_PATH: Client private key path (fallback, default: None)
|
||||
OPC_SERVER_CERT_PATH: Server certificate path (fallback, default: None)
|
||||
OPC_RECONNECTION_INTERVAL: Reconnection interval in seconds (fallback, default: 120)
|
||||
|
||||
Returns:
|
||||
dict: OPC server configuration dictionary
|
||||
"""
|
||||
opc_raw = getenv('OPC_CONFIG', None)
|
||||
|
||||
if opc_raw:
|
||||
return json.loads(opc_raw)
|
||||
|
||||
return {
|
||||
getenv('OPC_ID', '1'): {
|
||||
'id': getenv('OPC_ID', '1'),
|
||||
'server_name': getenv('OPC_SERVER_NAME', 'default_server'),
|
||||
'url': getenv('OPC_URL', 'opc.tcp://localhost:4840'),
|
||||
'server_uri': getenv('OPC_SERVER_URI', 'opc.tcp://localhost:4840'),
|
||||
'cert_path': getenv('OPC_CERT_PATH', None),
|
||||
'private_key_path': getenv('OPC_PRIVATE_KEY_PATH', None),
|
||||
'server_cert_path': getenv('OPC_SERVER_CERT_PATH', None),
|
||||
'reconnection_interval': int(getenv('OPC_RECONNECTION_INTERVAL', '120')),
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
def build_minio_config() -> dict[str, Any]:
|
||||
"""
|
||||
Build MinIO (S3-compatible) configuration from environment variables.
|
||||
|
||||
Environment Variables:
|
||||
MINIO_ENDPOINT: MinIO endpoint including scheme (default: http://localhost:9000)
|
||||
MINIO_ACCESS_KEY: Access key (default: minioadmin)
|
||||
MINIO_SECRET_KEY: Secret key (default: minioadmin)
|
||||
MINIO_REGION: Region name for S3 client (default: us-east-1)
|
||||
MINIO_BUCKET_DEFAULT: Default bucket for uploads (default: laborious)
|
||||
MINIO_SECURE: Whether to use HTTPS (default: false)
|
||||
Returns:
|
||||
dict: MinIO configuration dictionary
|
||||
"""
|
||||
return {
|
||||
'endpoint_url': getenv('MINIO_ENDPOINT_URL', 'http://localhost:9000'),
|
||||
'access_key': getenv('MINIO_ACCESS_KEY', 'minioadmin'),
|
||||
'secret_key': getenv('MINIO_SECRET_KEY', 'minioadmin'),
|
||||
'default_bucket': getenv('MINIO_DEFAULT_BUCKET', 'laborious'),
|
||||
'retention_hours': int(getenv('MINIO_RETENTION_HOURS', '24')),
|
||||
'secure': getenv('MINIO_SECURE', 'false') == 'true',
|
||||
}
|
||||
|
||||
|
||||
def build_import_config() -> dict[str, Any]:
|
||||
"""
|
||||
Build the `.sientia` model-import configuration from environment variables.
|
||||
|
||||
The password key is read as the raw base64 string and **not** validated here: the worker must
|
||||
start whether or not `IMPORT_MODEL_ENABLED` is set, and a missing or malformed key is an import
|
||||
failure at the decryption step (`laborious.utils.import_password.load_envelope_key`), not a
|
||||
boot failure.
|
||||
|
||||
Environment Variables:
|
||||
IMPORT_PASSWORD_KEY: base64 of the 32-byte AES-256-GCM key that wraps bundle passwords
|
||||
IMPORT_BUNDLE_BUCKET: bucket holding the uploaded bundles (default: sientia)
|
||||
IMPORT_BUNDLE_PREFIX: key prefix the uploads must sit under (default: imported_models/)
|
||||
IMPORT_WORK_DIR: worker scratch directory (default: <tempdir>/sientia-import)
|
||||
IMPORT_MAX_OBJECT_BYTES: gate 1 object size ceiling (default: 1 GiB)
|
||||
IMPORT_MAX_ARCHIVE_ENTRIES: gate 4 entry count ceiling (default: 5000)
|
||||
IMPORT_MAX_UNCOMPRESSED_BYTES: gate 4 uncompressed size ceiling (default: 4 GiB)
|
||||
IMPORT_MAX_COMPRESSION_RATIO: gate 4 compression ratio ceiling (default: 200)
|
||||
IMPORT_MODELS_COLLECTION: MongoDB collection holding the model listing (default: models)
|
||||
IMPORT_BUNDLE_RETENTION_DAYS: lifecycle expiry for the uploaded bundle (default: 7)
|
||||
|
||||
Returns:
|
||||
dict: import configuration dictionary
|
||||
"""
|
||||
prefix = getenv('IMPORT_BUNDLE_PREFIX', 'imported_models/')
|
||||
return {
|
||||
'password_key': getenv('IMPORT_PASSWORD_KEY'),
|
||||
'bucket': getenv('IMPORT_BUNDLE_BUCKET', 'sientia'),
|
||||
'prefix': prefix if prefix.endswith('/') else f'{prefix}/',
|
||||
'work_dir': getenv('IMPORT_WORK_DIR', path.join(tempfile.gettempdir(), 'sientia-import')),
|
||||
'max_object_bytes': int(getenv('IMPORT_MAX_OBJECT_BYTES', str(1024 * 1024 * 1024))),
|
||||
'max_entries': int(getenv('IMPORT_MAX_ARCHIVE_ENTRIES', '5000')),
|
||||
'max_uncompressed_bytes': int(
|
||||
getenv('IMPORT_MAX_UNCOMPRESSED_BYTES', str(4 * 1024 * 1024 * 1024))
|
||||
),
|
||||
'max_compression_ratio': float(getenv('IMPORT_MAX_COMPRESSION_RATIO', '200')),
|
||||
'models_collection': getenv('IMPORT_MODELS_COLLECTION', 'models'),
|
||||
'retention_days': int(getenv('IMPORT_BUNDLE_RETENTION_DAYS', '7')),
|
||||
}
|
||||
|
||||
|
||||
def build_import_status_config() -> dict[str, Any]:
|
||||
"""
|
||||
Build the connection to the import log database — a **second** Postgres connection.
|
||||
|
||||
The import log is `public.experiment_run` in the database owned by the Spring Boot BFF
|
||||
(`sientia-core-mlops-bff`), not the `sientia` database Laborious itself uses. The table and
|
||||
schema are constants of the code, never inputs; only the connection is configuration.
|
||||
|
||||
Environment Variables:
|
||||
IMPORT_STATUS_DB_HOST: host (default: localhost)
|
||||
IMPORT_STATUS_DB_PORT: port (default: 5432)
|
||||
IMPORT_STATUS_DB_NAME: database (default: sientia-core-mlops-bff)
|
||||
IMPORT_STATUS_DB_USER: user (default: mlops_bff_user)
|
||||
IMPORT_STATUS_DB_PASSWORD: password (default: empty)
|
||||
|
||||
Returns:
|
||||
dict: import status database configuration dictionary
|
||||
"""
|
||||
return {
|
||||
'host': getenv('IMPORT_STATUS_DB_HOST', 'localhost'),
|
||||
'port': int(getenv('IMPORT_STATUS_DB_PORT', '5432')),
|
||||
'dbname': getenv('IMPORT_STATUS_DB_NAME', 'sientia-core-mlops-bff'),
|
||||
'user': getenv('IMPORT_STATUS_DB_USER', 'mlops_bff_user'),
|
||||
'password': getenv('IMPORT_STATUS_DB_PASSWORD', ''),
|
||||
'schema': 'public',
|
||||
}
|
||||
34
laborious/utils/dataframe_debug.py
Normal file
34
laborious/utils/dataframe_debug.py
Normal file
@@ -0,0 +1,34 @@
|
||||
from typing import Any
|
||||
|
||||
from pandas import DataFrame
|
||||
|
||||
DEFAULT_MAX_DEBUG_DATAFRAME_ROWS = 100
|
||||
|
||||
|
||||
def build_dataframe_debug_message(
|
||||
message: str,
|
||||
data: Any,
|
||||
max_rows: int = DEFAULT_MAX_DEBUG_DATAFRAME_ROWS,
|
||||
) -> str:
|
||||
"""
|
||||
Build a safe debug message for dataframe payloads
|
||||
|
||||
Args:
|
||||
- message (str): Base message to identify the logged payload
|
||||
- data (Any): Payload to evaluate for dataframe-aware logging
|
||||
- max_rows (int): Maximum dataframe row count allowed for full payload logging
|
||||
|
||||
Return:
|
||||
Formatted debug message with full dataframe content or compact summary
|
||||
"""
|
||||
if not isinstance(data, DataFrame):
|
||||
return f'{message} {data}'
|
||||
|
||||
rows = data.shape[0]
|
||||
if rows <= max_rows:
|
||||
return f'{message}\n{data.to_csv()}'
|
||||
|
||||
return (
|
||||
f'{message} skipped because dataframe has {rows} rows '
|
||||
f'(max: {max_rows}). Shape: {data.shape}'
|
||||
)
|
||||
0
laborious/utils/filters/__init__.py
Normal file
0
laborious/utils/filters/__init__.py
Normal file
48
laborious/utils/filters/conditional_filters.py
Normal file
48
laborious/utils/filters/conditional_filters.py
Normal file
@@ -0,0 +1,48 @@
|
||||
from pandas import DataFrame
|
||||
|
||||
|
||||
def filter_specific_variables_null_values(data: DataFrame, config: dict) -> bool:
|
||||
"""
|
||||
Filter to check if specific variables contain null values.
|
||||
|
||||
This function examines a DataFrame to determine if any of the specified variables
|
||||
contain null (NaN) values. It returns True if null values are found for any of
|
||||
the specified variables, False otherwise.
|
||||
|
||||
Args:
|
||||
data (DataFrame): The pandas DataFrame to be examined. Must contain columns
|
||||
named 'variable' and 'value'.
|
||||
config (dict): Configuration dictionary containing the following key:
|
||||
- variables (list): List of variable names to check for null values
|
||||
|
||||
Returns:
|
||||
bool: True if any of the specified variables contain null values,
|
||||
False if none of the specified variables contain null values.
|
||||
|
||||
"""
|
||||
|
||||
if data.empty:
|
||||
return False
|
||||
|
||||
return not data[data['variable'].isin(config['variables']) & data['value'].isna()].empty
|
||||
|
||||
|
||||
def filter_empty_data(data: DataFrame, _config: dict) -> bool:
|
||||
"""
|
||||
Filter to check if the DataFrame is empty.
|
||||
|
||||
This function determines whether the provided DataFrame contains any data.
|
||||
It's a simple utility function that can be used in conditional logic to
|
||||
handle cases where no data is available.
|
||||
|
||||
Args:
|
||||
data (DataFrame): The pandas DataFrame to be checked for emptiness.
|
||||
_config (dict): Configuration dictionary (unused in this function).
|
||||
The underscore prefix indicates this parameter is required for
|
||||
interface consistency but not used in the implementation.
|
||||
|
||||
Returns:
|
||||
bool: True if the DataFrame is empty (has no rows), False if it contains data.
|
||||
|
||||
"""
|
||||
return data.empty
|
||||
64
laborious/utils/filters/mlflow_filters.py
Normal file
64
laborious/utils/filters/mlflow_filters.py
Normal file
@@ -0,0 +1,64 @@
|
||||
import numpy as np
|
||||
from pandas import DataFrame
|
||||
|
||||
|
||||
def api_error_filter(response: dict, _config: dict) -> bool:
|
||||
"""
|
||||
Filter MLFlow API responses for error conditions.
|
||||
|
||||
This function analyzes MLFlow API responses to detect error conditions
|
||||
and determine if the response should be filtered out due to quality
|
||||
or reliability issues.
|
||||
|
||||
|
||||
Args:
|
||||
response: MLFlow API response data (dict)
|
||||
_config: Filter configuration dictionary
|
||||
Required keys:
|
||||
- error_codes (list, optional): List of error codes to detect
|
||||
- error_keywords (list, optional): List of error keywords to detect
|
||||
- check_structure (bool, optional): Whether to validate response structure
|
||||
|
||||
Returns:
|
||||
bool: True if data should be filtered (contains errors), False otherwise
|
||||
|
||||
"""
|
||||
if not response:
|
||||
return True
|
||||
|
||||
if not response['success']:
|
||||
return True
|
||||
|
||||
return False
|
||||
|
||||
|
||||
def nan_values_filter(predictions: DataFrame, _config: dict) -> bool:
|
||||
"""
|
||||
Filter data for NaN (Not a Number) values.
|
||||
|
||||
This function detects NaN values in MLFlow prediction results and
|
||||
determines if the data quality is sufficient for further processing
|
||||
or export operations.
|
||||
|
||||
Args:
|
||||
predictions: DataFrame containing prediction data to check for NaN values
|
||||
_config: Filter configuration dictionary
|
||||
Required keys:
|
||||
- max_nan_ratio (float, optional): Maximum allowed NaN value ratio (0.0 to 1.0)
|
||||
- max_nan_count (int, optional): Maximum allowed NaN value count
|
||||
- check_nested (bool, optional): Whether to check nested data structures
|
||||
|
||||
Returns:
|
||||
bool: True if data should be filtered (too many NaN values), False otherwise
|
||||
|
||||
"""
|
||||
data = (
|
||||
predictions.replace({None: np.nan})
|
||||
.drop(columns=['timestamp'], errors='ignore')
|
||||
.infer_objects()
|
||||
)
|
||||
|
||||
if data.isna().all().all():
|
||||
return True
|
||||
|
||||
return False
|
||||
98
laborious/utils/import_password.py
Normal file
98
laborious/utils/import_password.py
Normal file
@@ -0,0 +1,98 @@
|
||||
"""The bundle password envelope: AES-256-GCM, opened inside the activity that uses the password.
|
||||
|
||||
The workflow only ever carries `password_envelope`, so no plaintext password reaches the Temporal
|
||||
event history. This module is imported by the bundle-opening activity and by nothing else — in
|
||||
particular not by `laborious/workflows/import_model.py`, which a test asserts.
|
||||
|
||||
Envelope layout, chosen because WebCrypto gives the Angular frontend AES-GCM natively:
|
||||
|
||||
base64( nonce(12 bytes) || ciphertext || GCM tag(16 bytes) )
|
||||
|
||||
The key is a 32-byte value held in a Kubernetes Secret and exposed as `IMPORT_PASSWORD_KEY`,
|
||||
base64-encoded. Neither the key, the envelope nor the recovered password is ever logged, notified,
|
||||
used as a metric label or written to the import record.
|
||||
"""
|
||||
|
||||
from __future__ import annotations
|
||||
|
||||
import base64
|
||||
import binascii
|
||||
from typing import Final
|
||||
|
||||
from cryptography.exceptions import InvalidTag
|
||||
from cryptography.hazmat.primitives.ciphers.aead import AESGCM
|
||||
|
||||
NONCE_SIZE: Final[int] = 12
|
||||
TAG_SIZE: Final[int] = 16
|
||||
KEY_SIZE: Final[int] = 32
|
||||
MIN_ENVELOPE_SIZE: Final[int] = NONCE_SIZE + TAG_SIZE
|
||||
|
||||
|
||||
class EnvelopeError(Exception):
|
||||
"""The envelope or its key is unusable.
|
||||
|
||||
Deliberately one type for every cause — missing key, wrong key, malformed base64, altered
|
||||
bytes — because the failure is reported at the decryption step either way. What it must never
|
||||
be confused with is a wrong *bundle* password: that one comes from the reader's gate 3, and the
|
||||
two carry different sentences.
|
||||
"""
|
||||
|
||||
|
||||
def load_envelope_key(raw_key: str | None) -> bytes:
|
||||
"""Decode the configured envelope key.
|
||||
|
||||
Args:
|
||||
raw_key: the value of `IMPORT_PASSWORD_KEY` — base64 of exactly 32 bytes.
|
||||
|
||||
Returns:
|
||||
bytes: the 32-byte key.
|
||||
|
||||
Raises:
|
||||
EnvelopeError: when the value is absent, not base64, or not 32 bytes long. There is no
|
||||
fallback interpretation: an unset key never means "the envelope is plaintext".
|
||||
"""
|
||||
if not raw_key:
|
||||
raise EnvelopeError('the import password key is not configured')
|
||||
try:
|
||||
key = base64.b64decode(raw_key, validate=True)
|
||||
except (binascii.Error, ValueError) as error:
|
||||
raise EnvelopeError('the import password key is not valid base64') from error
|
||||
if len(key) != KEY_SIZE:
|
||||
raise EnvelopeError(f'the import password key must be {KEY_SIZE} bytes')
|
||||
return key
|
||||
|
||||
|
||||
def decrypt_password_envelope(envelope: str, key: bytes) -> str:
|
||||
"""Recover the bundle password from its envelope.
|
||||
|
||||
Args:
|
||||
envelope: base64 of `nonce || ciphertext || tag`.
|
||||
key: the 32-byte key from `load_envelope_key`.
|
||||
|
||||
Returns:
|
||||
str: the plaintext password, exactly as it was typed — not trimmed, not case-folded. NFC
|
||||
normalisation happens at key derivation, where the producer does it.
|
||||
|
||||
Raises:
|
||||
EnvelopeError: malformed envelope, wrong key or altered bytes (AES-GCM authentication).
|
||||
"""
|
||||
if not envelope:
|
||||
raise EnvelopeError('the import request carries no password envelope')
|
||||
try:
|
||||
payload = base64.b64decode(envelope, validate=True)
|
||||
except (binascii.Error, ValueError) as error:
|
||||
raise EnvelopeError('the password envelope is not valid base64') from error
|
||||
if len(payload) < MIN_ENVELOPE_SIZE:
|
||||
raise EnvelopeError('the password envelope is too short to hold a nonce and a tag')
|
||||
|
||||
nonce, sealed = payload[:NONCE_SIZE], payload[NONCE_SIZE:]
|
||||
try:
|
||||
plaintext = AESGCM(key).decrypt(nonce, sealed, None)
|
||||
except InvalidTag as error:
|
||||
raise EnvelopeError('the password envelope could not be authenticated') from error
|
||||
except ValueError as error:
|
||||
raise EnvelopeError('the password envelope could not be opened') from error
|
||||
try:
|
||||
return plaintext.decode('utf-8')
|
||||
except UnicodeDecodeError as error:
|
||||
raise EnvelopeError('the recovered password is not valid UTF-8') from error
|
||||
0
laborious/utils/models/__init__.py
Normal file
0
laborious/utils/models/__init__.py
Normal file
348
laborious/utils/models/minio_dataframe_payload.py
Normal file
348
laborious/utils/models/minio_dataframe_payload.py
Normal file
@@ -0,0 +1,348 @@
|
||||
"""
|
||||
MinIO-backed DataFrame payload for Temporal workflows.
|
||||
|
||||
Data is never stored as a pandas ``DataFrame`` field on the dataclass.
|
||||
Instead, the DataFrame is only provided as an input to:
|
||||
`from_dataframe` / `from_dataframe_to_dict`.
|
||||
|
||||
At build time, the DataFrame is evaluated for its serialized size; if it exceeds
|
||||
the configured threshold, it is serialized to parquet bytes and uploaded to MinIO.
|
||||
Otherwise, it is inlined as a Temporal-friendly ``dict``.
|
||||
"""
|
||||
|
||||
import pickle
|
||||
import re
|
||||
from collections.abc import Hashable
|
||||
from dataclasses import dataclass
|
||||
from datetime import datetime
|
||||
from io import BytesIO
|
||||
from os import getenv
|
||||
from typing import Any, Literal
|
||||
|
||||
from pandas import DataFrame, read_parquet
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.repository.minio_repository import MinioRepository
|
||||
from sientia_do.temporal.constants import DATETIME_FORMAT_FILENAME, DATETIME_FORMAT_WITH_TZ, now
|
||||
|
||||
# Keys that are part of the serialized wire format (not arbitrary metadata).
|
||||
_SERIALIZED_FIELD_KEYS = frozenset({'data', 'bucket', 'object_key', 'object_prefix', 'uri'})
|
||||
|
||||
_OBJECT_TIMESTAMP_PATTERN = re.compile(
|
||||
r'-(?:initial|transform)-(\d{4}-\d{2}-\d{2}_\d{2}-\d{2}-\d{2})\.parquet$'
|
||||
)
|
||||
|
||||
OFFLOAD_THRESHOLD_BYTES = int(
|
||||
float(getenv('SIENTIA_MINIO_OFFLOAD_THRESHOLD_MEGABYTES', '1.5')) * 1024 * 1024
|
||||
)
|
||||
|
||||
# Relative prefix used for storing offloaded prediction datasets in MinIO.
|
||||
# It is also the root directory for retention cleanup listing.
|
||||
PREDICTION_DATASETS_PREFIX = 'prediction_datasets'
|
||||
|
||||
OperationKind = Literal['initial', 'transform', 'predict']
|
||||
|
||||
|
||||
def _build_object_key(
|
||||
model_name: str, operation: OperationKind, timestamp: str
|
||||
) -> tuple[str, str | None]:
|
||||
"""
|
||||
Build the MinIO object key and the directory prefix used for retention listing.
|
||||
|
||||
Args:
|
||||
model_name: Registered model name used in the pipeline.
|
||||
operation: Either initial (pre-transform load) or transform (post-MLFlow transform).
|
||||
timestamp: Filename timestamp segment from DATETIME_FORMAT_FILENAME.
|
||||
|
||||
Return:
|
||||
tuple[str, str | None]: Full object key and normalized prefix (or None if at bucket root).
|
||||
"""
|
||||
# Naming convention:
|
||||
# - Directory is always `prediction_datasets/<model_name>`
|
||||
# - Filename follows the retention-parsing pattern
|
||||
basename = f'{model_name}-{operation}-{timestamp}.parquet'
|
||||
model_dir = model_name.strip().strip('/')
|
||||
prefix = f'{PREDICTION_DATASETS_PREFIX}/{model_dir}'
|
||||
return f'{prefix}/{basename}', prefix
|
||||
|
||||
|
||||
@dataclass
|
||||
class MinioDataFramePayload:
|
||||
"""
|
||||
Serializable payload after a DataFrame was evaluated: inline tabular dict and/or MinIO keys.
|
||||
|
||||
Build from a live DataFrame only via `from_dataframe` / `from_dataframe_to_dict`.
|
||||
Rehydrate from Temporal via `from_dict`. The DataFrame is not a field on this class.
|
||||
"""
|
||||
|
||||
last_timestamp: str
|
||||
status: dict[str, Any] | None = None
|
||||
data: dict[Hashable, Any] | None = None
|
||||
bucket: str | None = None
|
||||
object_key: str | None = None
|
||||
object_prefix: str | None = None
|
||||
uri: str | None = None
|
||||
|
||||
@staticmethod
|
||||
def _debug(
|
||||
logger: Logger | None,
|
||||
message: str,
|
||||
metadata: dict[str, Any] | None = None,
|
||||
) -> None:
|
||||
"""
|
||||
Emit debug logs only when logger is provided
|
||||
|
||||
Args:
|
||||
- logger (Logger | None): Logger instance used for debug messages
|
||||
- message (str): Message to be logged
|
||||
- metadata (dict[str, Any] | None): Optional workflow metadata context
|
||||
"""
|
||||
if logger is None:
|
||||
return
|
||||
logger.custom_debug(message, metadata)
|
||||
|
||||
@classmethod
|
||||
def from_dict(cls, raw: 'dict[str, Any] | MinioDataFramePayload') -> 'MinioDataFramePayload':
|
||||
"""
|
||||
Reconstruct a MinioDataFramePayload from a plain dict produced by Temporal serialization.
|
||||
|
||||
Temporal converts dataclass return values into plain dicts when crossing
|
||||
workflow/activity boundaries. This method rebuilds the typed instance so
|
||||
that methods like ``retrieve``, ``cleanup_prefix`` and ``has_data`` are
|
||||
available on the receiving side.
|
||||
|
||||
If the argument is already a MinioDataFramePayload, it is returned as-is.
|
||||
|
||||
Args:
|
||||
raw: Dict with keys matching the dataclass fields
|
||||
(last_timestamp, status, data, bucket, object_key, object_prefix, uri),
|
||||
or an existing MinioDataFramePayload instance.
|
||||
|
||||
Return:
|
||||
MinioDataFramePayload: Reconstructed (or original) instance.
|
||||
"""
|
||||
if isinstance(raw, MinioDataFramePayload):
|
||||
return raw
|
||||
return cls(
|
||||
last_timestamp=raw['last_timestamp'],
|
||||
status=raw.get('status'),
|
||||
data=raw.get('data'),
|
||||
bucket=raw.get('bucket'),
|
||||
object_key=raw.get('object_key'),
|
||||
object_prefix=raw.get('object_prefix'),
|
||||
uri=raw.get('uri'),
|
||||
)
|
||||
|
||||
@staticmethod
|
||||
def estimate_size_bytes(
|
||||
df: DataFrame,
|
||||
metadata: dict[str, Any] | None = None,
|
||||
logger: Logger | None = None,
|
||||
) -> int:
|
||||
"""
|
||||
Approximate serialized size of the DataFrame as the default-orient dict.
|
||||
|
||||
Args:
|
||||
df: DataFrame whose tabular content size is estimated.
|
||||
|
||||
Return:
|
||||
int: Estimated size in bytes (pickle of dict representation).
|
||||
"""
|
||||
try:
|
||||
size = len(pickle.dumps(df.to_dict()))
|
||||
except Exception:
|
||||
size = len(pickle.dumps(df))
|
||||
|
||||
MinioDataFramePayload._debug(
|
||||
logger,
|
||||
f'DataFrame size: {size} bytes',
|
||||
metadata,
|
||||
)
|
||||
return size
|
||||
|
||||
@staticmethod
|
||||
def parse_object_timestamp(object_key: str) -> datetime | None:
|
||||
"""
|
||||
Parse the timestamp embedded in the object key basename (before .parquet).
|
||||
|
||||
Args:
|
||||
object_key: S3/MinIO object key whose basename follows
|
||||
``{model}-{initial|transform}-{DATETIME_FORMAT_FILENAME}.parquet``.
|
||||
|
||||
Return:
|
||||
datetime | None: Parsed UTC-naive datetime from the key, or None if not matched.
|
||||
"""
|
||||
basename = object_key.rsplit('/', 1)[-1]
|
||||
match = _OBJECT_TIMESTAMP_PATTERN.search(basename)
|
||||
if not match:
|
||||
return None
|
||||
try:
|
||||
return datetime.strptime(match.group(1), DATETIME_FORMAT_FILENAME)
|
||||
except ValueError:
|
||||
return None
|
||||
|
||||
def cleanup_prefix(self) -> str | None:
|
||||
"""
|
||||
Return True if cleanup is enabled for this payload.
|
||||
"""
|
||||
if self.object_key is not None and self.data is None:
|
||||
return self.object_prefix
|
||||
return None
|
||||
|
||||
def has_data(self) -> bool:
|
||||
"""
|
||||
Return True if the payload has some data internally or in MinIO.
|
||||
"""
|
||||
return (self.data is not None and self.data != {}) or self.object_key is not None
|
||||
|
||||
@classmethod
|
||||
async def from_dataframe(
|
||||
cls,
|
||||
dataframe: DataFrame | None,
|
||||
minio_repo: MinioRepository,
|
||||
model_name: str,
|
||||
operation: OperationKind,
|
||||
status: dict[str, Any] | None = None,
|
||||
workflow_metadata: dict | None = None,
|
||||
last_timestamp: str | None = None,
|
||||
logger: Logger | None = None,
|
||||
) -> 'MinioDataFramePayload':
|
||||
"""
|
||||
Evaluate the DataFrame size, then either inline dict or upload parquet to MinIO.
|
||||
|
||||
The DataFrame is not stored on the returned instance.
|
||||
|
||||
Args:
|
||||
dataframe: Tabular data to evaluate and persist (inline or MinIO).
|
||||
metadata: Small metadata dict merged into the payload (e.g. success, message).
|
||||
minio_repo: sientia_do MinioRepository (or compatible) with `upload_file()`.
|
||||
workflow_metadata: Metadata passed to MinIO store for logging/metrics.
|
||||
model_name: Registered model name used in the object basename.
|
||||
operation: Either ``initial`` (query load) or ``transform`` (post-transform).
|
||||
key_prefix: Backward-compatible parameter (currently ignored for object naming).
|
||||
size_threshold_bytes: Byte limit before offload. When None, the module-level
|
||||
environment-derived default is used.
|
||||
|
||||
Return:
|
||||
MinioDataFramePayload: Instance with data and/or MinIO fields set.
|
||||
"""
|
||||
|
||||
if dataframe is None or dataframe.empty:
|
||||
cls._debug(
|
||||
logger,
|
||||
'MinioDataFramePayload.from_dataframe received empty dataframe, returning empty payload',
|
||||
workflow_metadata,
|
||||
)
|
||||
return cls(
|
||||
data=None, last_timestamp=now().strftime(DATETIME_FORMAT_WITH_TZ), status=status
|
||||
)
|
||||
|
||||
if last_timestamp is None:
|
||||
last_timestamp = max(dataframe['timestamp'].values.tolist())
|
||||
|
||||
dataframe_size = cls.estimate_size_bytes(dataframe, workflow_metadata, logger)
|
||||
cls._debug(
|
||||
logger,
|
||||
(
|
||||
f'MinioDataFramePayload.from_dataframe estimated size: {dataframe_size} bytes '
|
||||
f'(threshold: {OFFLOAD_THRESHOLD_BYTES} bytes)'
|
||||
),
|
||||
workflow_metadata,
|
||||
)
|
||||
|
||||
if dataframe_size <= OFFLOAD_THRESHOLD_BYTES:
|
||||
cls._debug(
|
||||
logger,
|
||||
'MinioDataFramePayload.from_dataframe using inline payload',
|
||||
workflow_metadata,
|
||||
)
|
||||
return cls(data=dataframe.to_dict(), last_timestamp=last_timestamp, status=status)
|
||||
|
||||
timestamp = now().strftime(DATETIME_FORMAT_FILENAME)
|
||||
object_key, object_prefix = _build_object_key(model_name, operation, timestamp)
|
||||
cls._debug(
|
||||
logger,
|
||||
(
|
||||
'MinioDataFramePayload.from_dataframe offloading payload to MinIO '
|
||||
f'with key {object_key}'
|
||||
),
|
||||
workflow_metadata,
|
||||
)
|
||||
|
||||
# Upload using the relative object key. The upstream repository will
|
||||
# prefix it internally under its MinIO namespace.
|
||||
parquet_buffer = BytesIO()
|
||||
dataframe.to_parquet(parquet_buffer, engine='pyarrow', index=True)
|
||||
file_bytes = parquet_buffer.getvalue()
|
||||
|
||||
upload_result = await minio_repo.upload_file(
|
||||
file_bytes=file_bytes,
|
||||
relative_key=object_key,
|
||||
metadata=workflow_metadata,
|
||||
)
|
||||
|
||||
bucket = minio_repo.bucket
|
||||
object_key_full = upload_result.get('minio_object_name', object_key)
|
||||
uri = f's3://{bucket}/{object_key_full}' if bucket else None
|
||||
cls._debug(
|
||||
logger,
|
||||
f'MinioDataFramePayload.from_dataframe upload completed: {uri}',
|
||||
workflow_metadata,
|
||||
)
|
||||
|
||||
return cls(
|
||||
data=None,
|
||||
bucket=bucket,
|
||||
object_key=object_key_full,
|
||||
object_prefix=object_prefix,
|
||||
uri=uri,
|
||||
last_timestamp=last_timestamp,
|
||||
status=status,
|
||||
)
|
||||
|
||||
async def retrieve(
|
||||
self,
|
||||
minio_repo: MinioRepository,
|
||||
workflow_metadata: dict[str, Any] | None = None,
|
||||
logger: Logger | None = None,
|
||||
) -> DataFrame:
|
||||
"""
|
||||
Load parquet from MinIO when object_key is set and populate inline data.
|
||||
|
||||
Args:
|
||||
minio_repo: sientia_do MinioRepository (or compatible) with download_file().
|
||||
workflow_metadata: Metadata passed to MinIO read for logging/metrics.
|
||||
|
||||
Return:
|
||||
dict[str, Any]: Flat dict with data filled (same keys as to_dict after load).
|
||||
"""
|
||||
if self.data is not None:
|
||||
self._debug(
|
||||
logger,
|
||||
'MinioDataFramePayload.retrieve using inline payload data',
|
||||
workflow_metadata,
|
||||
)
|
||||
return DataFrame(self.data)
|
||||
|
||||
if not self.has_data():
|
||||
self._debug(
|
||||
logger,
|
||||
'MinioDataFramePayload.retrieve found no payload data, returning empty dataframe',
|
||||
workflow_metadata,
|
||||
)
|
||||
return DataFrame()
|
||||
|
||||
self._debug(
|
||||
logger,
|
||||
f'MinioDataFramePayload.retrieve downloading object from MinIO: {self.object_key}',
|
||||
workflow_metadata,
|
||||
)
|
||||
file_bytes = await minio_repo.download_file(
|
||||
object_name=self.object_key, metadata=workflow_metadata
|
||||
)
|
||||
df = read_parquet(BytesIO(file_bytes))
|
||||
self._debug(
|
||||
logger,
|
||||
f'MinioDataFramePayload.retrieve loaded dataframe from MinIO with shape {df.shape}',
|
||||
workflow_metadata,
|
||||
)
|
||||
return df
|
||||
32
laborious/utils/repository/minio_manager.py
Normal file
32
laborious/utils/repository/minio_manager.py
Normal file
@@ -0,0 +1,32 @@
|
||||
from sientia_do.notifications.handlers import NotificationHandler
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.observability.sientia_monitoring import SientiaMonitoring
|
||||
from sientia_do.repository.minio_repository import MinioRepository
|
||||
|
||||
|
||||
class MinioManager(SientiaMonitoring):
|
||||
minio_repository: MinioRepository | None = None
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
minio_repository: MinioRepository | None = None,
|
||||
logger: Logger | None = None,
|
||||
notification_handler: NotificationHandler | None = None,
|
||||
metrics_controller: MetricsController | None = None,
|
||||
):
|
||||
if self.minio_repository is None:
|
||||
self.minio_repository = minio_repository
|
||||
SientiaMonitoring.__init__(self, logger, notification_handler, metrics_controller)
|
||||
|
||||
def close(self) -> None:
|
||||
"""
|
||||
Close the MinioManager and clean up resources.
|
||||
"""
|
||||
if self.minio_repository is not None:
|
||||
try:
|
||||
self.minio_repository.close()
|
||||
finally:
|
||||
self.minio_repository = None
|
||||
|
||||
SientiaMonitoring.shutdown(self)
|
||||
1774
laborious/utils/repository/model_repository.py
Normal file
1774
laborious/utils/repository/model_repository.py
Normal file
File diff suppressed because it is too large
Load Diff
866
laborious/utils/repository/opc_repository.py
Normal file
866
laborious/utils/repository/opc_repository.py
Normal file
@@ -0,0 +1,866 @@
|
||||
import asyncio
|
||||
import json
|
||||
import time
|
||||
import traceback
|
||||
from datetime import datetime
|
||||
from pathlib import Path
|
||||
from typing import Any
|
||||
|
||||
from asyncua import Client
|
||||
from asyncua.crypto.security_policies import SecurityPolicyBasic256
|
||||
from asyncua.ua import DataValue, Variant, VariantType
|
||||
from asyncua.ua.uaerrors import UaStatusCodeError
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.notifications.models import NotificationLevel
|
||||
from sientia_do.observability.logger import Logger
|
||||
from sientia_do.observability.metrics_controller import MetricsController
|
||||
from sientia_do.observability.sientia_monitoring import SientiaMonitoring
|
||||
|
||||
from laborious import metrics
|
||||
|
||||
# Requested session and secure channel lifetime (ms) before server revision; 10 minutes.
|
||||
OPC_UA_SESSION_AND_CHANNEL_TIMEOUT_MS = 10 * 60 * 1000
|
||||
|
||||
|
||||
class OpcClientAlreadyExistsError(RuntimeError):
|
||||
"""Raised when _create_client is called while self.client is already set."""
|
||||
|
||||
|
||||
class OpcSessionAlreadyConnectedError(RuntimeError):
|
||||
"""Raised when _open_session is called while a UA session is already open."""
|
||||
|
||||
|
||||
class OpcClientNotInitializedError(RuntimeError):
|
||||
"""Raised when _open_session is called before _create_client."""
|
||||
|
||||
|
||||
RECONNECTABLE_OPC_BAD_NAMES: frozenset[str] = frozenset(
|
||||
{
|
||||
'BadSessionIdInvalid',
|
||||
'BadSessionClosed',
|
||||
'BadSessionNotActivated',
|
||||
'BadSecureChannelIdInvalid',
|
||||
'BadSecureChannelClosed',
|
||||
'BadSecureChannelTokenUnknown',
|
||||
'BadTcpSecureChannelUnknown',
|
||||
'BadServerNotConnected',
|
||||
'BadConnectionClosed',
|
||||
'BadDisconnect',
|
||||
'BadConnectionRejected',
|
||||
'BadCommunicationError',
|
||||
'BadRequestInterrupted',
|
||||
'BadUnknownResponse',
|
||||
'BadTimeout',
|
||||
'BadRequestTimeout',
|
||||
'BadSequenceNumberInvalid',
|
||||
'BadSequenceNumberUnknown',
|
||||
'BadSecurityModeInsufficient',
|
||||
'BadRequestHeaderInvalid',
|
||||
'BadInvalidState',
|
||||
}
|
||||
)
|
||||
|
||||
|
||||
def _opc_authentication_token_str(client: Client | None) -> str:
|
||||
"""
|
||||
Serialize the current OPC UA authentication token (session handle) for logging and metrics.
|
||||
|
||||
Return:
|
||||
str: Token string, or "unknown" if unavailable.
|
||||
"""
|
||||
if client is None:
|
||||
return 'unknown'
|
||||
try:
|
||||
proto = client.uaclient.protocol
|
||||
if proto is None:
|
||||
return 'unknown'
|
||||
tok = getattr(proto, 'authentication_token', None)
|
||||
if tok is None:
|
||||
return 'unknown'
|
||||
return str(tok)
|
||||
except Exception:
|
||||
return 'unknown'
|
||||
|
||||
|
||||
def _opc_status_from_exception(exc: BaseException) -> str:
|
||||
"""
|
||||
Resolve OPC UA status name from an exception, including chained UaStatusCodeError causes.
|
||||
|
||||
Args:
|
||||
exc (BaseException): Raised error from asyncua.
|
||||
|
||||
Return:
|
||||
str: Status class name or generic Python exception name.
|
||||
"""
|
||||
current: BaseException | None = exc
|
||||
while current is not None:
|
||||
if isinstance(current, UaStatusCodeError):
|
||||
return type(current).__name__
|
||||
current = current.__cause__
|
||||
return type(exc).__name__
|
||||
|
||||
|
||||
def is_reconnectable_opcua_bad(exc: BaseException) -> bool:
|
||||
"""
|
||||
Return whether the exception is a Tier-1 OPC UA Bad* that should trigger reconnect.
|
||||
|
||||
Args:
|
||||
exc (BaseException): Raised error from get_node or write_value.
|
||||
|
||||
Return:
|
||||
bool: True if reconnect should be scheduled.
|
||||
"""
|
||||
return _opc_status_from_exception(exc) in RECONNECTABLE_OPC_BAD_NAMES
|
||||
|
||||
|
||||
def _model_labels_from_write_metadata(metadata: dict[str, Any] | None) -> dict[str, str]:
|
||||
"""
|
||||
Extract model_id and model_name from write metadata for Prometheus labels.
|
||||
|
||||
Args:
|
||||
metadata (dict[str, Any] | None): Context passed into write_data; may omit keys.
|
||||
|
||||
Return:
|
||||
dict[str, str]: Labels model_id and model_name, defaulting to "unknown".
|
||||
"""
|
||||
if not metadata:
|
||||
return {'model_id': 'unknown', 'model_name': 'unknown'}
|
||||
return {
|
||||
'model_id': str(metadata.get('model_id', 'unknown')),
|
||||
'model_name': str(metadata.get('model_name', 'unknown')),
|
||||
}
|
||||
|
||||
|
||||
data_type_map = {
|
||||
'float': {
|
||||
'converter': float,
|
||||
'opc_type': VariantType.Float,
|
||||
},
|
||||
'double': {
|
||||
'converter': float,
|
||||
'opc_type': VariantType.Double,
|
||||
},
|
||||
'int': {
|
||||
'converter': int,
|
||||
'opc_type': VariantType.Int32,
|
||||
},
|
||||
'bool': {
|
||||
'converter': bool,
|
||||
'opc_type': VariantType.Boolean,
|
||||
},
|
||||
'str': {
|
||||
'converter': str,
|
||||
'opc_type': VariantType.String,
|
||||
},
|
||||
}
|
||||
|
||||
|
||||
class OpcRepository(SientiaMonitoring):
|
||||
def __init__(
|
||||
self,
|
||||
opc_id: str,
|
||||
url: str,
|
||||
server_name: str,
|
||||
logger: Logger,
|
||||
notification_handler: NotificationHandler,
|
||||
metrics_controller: MetricsController,
|
||||
reconnection_interval: int = 60,
|
||||
server_uri: str | None = None,
|
||||
cert_path: str | None = None,
|
||||
private_key_path: str | None = None,
|
||||
server_cert_path: str | None = None,
|
||||
):
|
||||
self.url = url
|
||||
self.id = opc_id
|
||||
self.server_name = server_name
|
||||
self.server_uri = server_uri
|
||||
self.cert_path = cert_path
|
||||
self.private_key_path = private_key_path
|
||||
self.server_cert_path = server_cert_path
|
||||
self.reconnection_interval = reconnection_interval
|
||||
self.last_reconnection_time: None | datetime = None
|
||||
self.disconnection_interval = 10.0
|
||||
self.notification_handler = notification_handler
|
||||
self.client: None | Client = None
|
||||
|
||||
SientiaMonitoring.__init__(self, logger, notification_handler, metrics_controller)
|
||||
|
||||
self.metadata = {
|
||||
'model_name': '-',
|
||||
'model_id': '-',
|
||||
'workflow_name': 'opc_repository',
|
||||
'schedule_name': '-',
|
||||
}
|
||||
self._last_write_mono: float | None = None
|
||||
self._connection_lock = asyncio.Lock()
|
||||
self._session_ready = asyncio.Event()
|
||||
self._reconnect_task: asyncio.Task[None] | None = None
|
||||
self._allow_reconnect = True
|
||||
|
||||
def _opc_debug_tags(self, session_id: str) -> dict[str, str]:
|
||||
"""
|
||||
Build Prometheus/log label tags for OPC session-scoped metrics.
|
||||
|
||||
Args:
|
||||
session_id (str): OPC UA session token string.
|
||||
|
||||
Return:
|
||||
dict[str, str]: Labels pod_id, server_name, runtime, opc_server_id, session_id.
|
||||
"""
|
||||
return {
|
||||
'pod_id': str(getattr(self, 'pod_id', 'unknown')),
|
||||
'server_name': self.server_name,
|
||||
'runtime': str(getattr(self, 'runtime', 'unknown')),
|
||||
'opc_server_id': self.id,
|
||||
'session_id': session_id,
|
||||
}
|
||||
|
||||
def _is_session_open(self) -> bool:
|
||||
"""
|
||||
Return whether the asyncua client has an open transport session.
|
||||
|
||||
Return:
|
||||
bool: True when protocol exists and is not closed.
|
||||
"""
|
||||
if self.client is None:
|
||||
return False
|
||||
try:
|
||||
proto = self.client.uaclient.protocol
|
||||
return proto is not None and proto.state != 'closed'
|
||||
except Exception:
|
||||
return False
|
||||
|
||||
def _reconnection_window_elapsed(self) -> bool:
|
||||
"""
|
||||
Return whether enough time has passed since the last reconnect attempt.
|
||||
|
||||
Return:
|
||||
bool: True if a new reconnect is allowed.
|
||||
"""
|
||||
if self.last_reconnection_time is None:
|
||||
return True
|
||||
return (
|
||||
datetime.now() - self.last_reconnection_time
|
||||
).total_seconds() > self.reconnection_interval
|
||||
|
||||
def _not_connected_error(self) -> dict[str, Any]:
|
||||
"""
|
||||
Build the standard error payload when validate_connection finds no open protocol.
|
||||
|
||||
Return:
|
||||
dict[str, Any]: Notification fields for OPC_CONNECTION_NOT_READY.
|
||||
"""
|
||||
return {
|
||||
'notification_id': f'OPC_CONNECTION_NOT_READY_{self.id}',
|
||||
'message': f'OPC server {self.id} is not connected',
|
||||
'block': 'opc_repository',
|
||||
'level': NotificationLevel.WARNING,
|
||||
}
|
||||
|
||||
async def set_security(self) -> None:
|
||||
"""
|
||||
Configure certificates and timeouts on the asyncua client.
|
||||
|
||||
Raises:
|
||||
ValueError: If cert paths or client are missing.
|
||||
"""
|
||||
if self.cert_path is None or self.private_key_path is None:
|
||||
raise ValueError(
|
||||
'Certificate and private key paths must be provided for secure connection.'
|
||||
)
|
||||
|
||||
cert = Path(self.cert_path)
|
||||
private_key = Path(self.private_key_path)
|
||||
server_cert = Path(self.server_cert_path) if self.server_cert_path else None
|
||||
|
||||
if self.client is None:
|
||||
raise ValueError('Client must be initialized before setting security')
|
||||
|
||||
self.client.application_uri = self.server_uri
|
||||
self.info('Setting security...', self.metadata)
|
||||
await self.client.set_security(
|
||||
SecurityPolicyBasic256,
|
||||
certificate=str(cert),
|
||||
private_key=str(private_key),
|
||||
server_certificate=str(server_cert) if server_cert else None,
|
||||
)
|
||||
self.client.secure_channel_timeout = OPC_UA_SESSION_AND_CHANNEL_TIMEOUT_MS
|
||||
self.client.session_timeout = OPC_UA_SESSION_AND_CHANNEL_TIMEOUT_MS
|
||||
|
||||
async def _create_client(self) -> None:
|
||||
"""
|
||||
Instantiate the asyncua Client and apply security when configured.
|
||||
|
||||
Caller must hold _connection_lock. Does not open a UA session.
|
||||
|
||||
Raises:
|
||||
OpcClientAlreadyExistsError: If self.client is already set.
|
||||
"""
|
||||
if self.client is not None:
|
||||
raise OpcClientAlreadyExistsError(
|
||||
f'OPC client already exists for server {self.id}; '
|
||||
'call disconnect() before creating a new client'
|
||||
)
|
||||
|
||||
self.client = Client(self.url, timeout=10, watchdog_intervall=50) # type: ignore[attr-defined]
|
||||
self.client.name = self.pod_id
|
||||
self.client.application_name = self.pod_id
|
||||
pod_uri = self.pod_id.replace('-', ':')
|
||||
self.client.application_uri = pod_uri
|
||||
self.client.product_uri = pod_uri
|
||||
if self.cert_path:
|
||||
await self.set_security()
|
||||
|
||||
async def _open_session(self) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Open the OPC UA session on the existing client.
|
||||
|
||||
Caller must hold _connection_lock.
|
||||
|
||||
Raises:
|
||||
OpcClientNotInitializedError: If self.client is None.
|
||||
OpcSessionAlreadyConnectedError: If a session is already open.
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: Success flag and error payload on connect failure.
|
||||
"""
|
||||
if self.client is None:
|
||||
raise OpcClientNotInitializedError(
|
||||
f'OPC client is not initialized for server {self.id}; '
|
||||
'call _create_client() before opening a session'
|
||||
)
|
||||
if self._is_session_open():
|
||||
raise OpcSessionAlreadyConnectedError(
|
||||
f'OPC session already connected for server {self.id}; '
|
||||
'call disconnect() before connecting again'
|
||||
)
|
||||
|
||||
tags = {
|
||||
'pod_id': self.pod_id,
|
||||
'server_name': self.server_name,
|
||||
}
|
||||
await self.emit_metric(metrics.OPC_CONNECTIONS_TOTAL, tags)
|
||||
|
||||
try:
|
||||
await self.client.connect()
|
||||
|
||||
session_id = _opc_authentication_token_str(self.client)
|
||||
revised_session_timeout_ms = int(self.client.session_timeout)
|
||||
revised_secure_channel_timeout_ms = int(self.client.secure_channel_timeout)
|
||||
self.info(
|
||||
f'OPC new session connected opc_server_id={self.id} session_id={session_id} '
|
||||
f'revised_session_timeout_ms={revised_session_timeout_ms} '
|
||||
f'revised_secure_channel_timeout_ms={revised_secure_channel_timeout_ms}',
|
||||
self.metadata,
|
||||
)
|
||||
await self.emit_metric(
|
||||
metrics.OPC_SESSION_CREATED_TOTAL, self._opc_debug_tags(session_id)
|
||||
)
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.OPC_SESSION_REVISED_TIMEOUT_MS,
|
||||
method='set',
|
||||
tags=self._opc_debug_tags(session_id),
|
||||
value=revised_session_timeout_ms,
|
||||
)
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.OPC_CONNECTION_STATUS,
|
||||
method='set',
|
||||
tags={**tags, 'server_url': self.url},
|
||||
value=1,
|
||||
)
|
||||
|
||||
self._last_write_mono = None
|
||||
self._session_ready.set()
|
||||
return True, {}
|
||||
|
||||
except Exception as e:
|
||||
await self._disconnect_locked()
|
||||
trace = traceback.format_exc()
|
||||
self.error(trace, self.metadata)
|
||||
await self.emit_metric(metrics.OPC_CONNECTIONS_FAILED, tags)
|
||||
return False, {
|
||||
'notification_id': f'OPC_CONNECTION_ERROR_{self.id}',
|
||||
'message': f'Failed to connect to OPC server: {e}',
|
||||
'block': 'opc_repository',
|
||||
'level': NotificationLevel.ERROR,
|
||||
'attachment_content': trace,
|
||||
}
|
||||
|
||||
async def _connect_locked(self) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Create the client when absent, then open a UA session.
|
||||
|
||||
Caller must hold _connection_lock.
|
||||
|
||||
Raises:
|
||||
OpcSessionAlreadyConnectedError: If a session is already open.
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: Result from _open_session on connect failure.
|
||||
"""
|
||||
if self._is_session_open():
|
||||
raise OpcSessionAlreadyConnectedError(
|
||||
f'OPC session already connected for server {self.id}; '
|
||||
'call disconnect() before connecting again'
|
||||
)
|
||||
if self.client is None:
|
||||
await self._create_client()
|
||||
return await self._open_session()
|
||||
|
||||
async def _disconnection_fallback(self) -> list[dict[str, Any]]:
|
||||
"""
|
||||
Try up to five times to disconnect from the OPC UA server.
|
||||
"""
|
||||
assert self.client is not None
|
||||
error_stack: list[dict[str, Any]] = []
|
||||
for i in range(5):
|
||||
try:
|
||||
self.info(
|
||||
f'Disconnecting from OPC UA server, attempt {i + 1} of 5',
|
||||
self.metadata,
|
||||
)
|
||||
await self.client.disconnect()
|
||||
return []
|
||||
except Exception as e:
|
||||
self.error(
|
||||
f'Failed to disconnect from OPC UA server in attempt {i + 1} of 5: {e}',
|
||||
self.metadata,
|
||||
)
|
||||
error_stack.append(
|
||||
{
|
||||
'attempt': i + 1,
|
||||
'error': str(e),
|
||||
'traceback': traceback.format_exc(),
|
||||
}
|
||||
)
|
||||
await asyncio.sleep(self.disconnection_interval * i)
|
||||
return error_stack
|
||||
|
||||
async def _disconnect_locked(self) -> None:
|
||||
"""
|
||||
Tear down the current session and client.
|
||||
|
||||
Caller must hold _connection_lock.
|
||||
"""
|
||||
self._last_write_mono = None
|
||||
self._session_ready.clear()
|
||||
|
||||
if self.client is None:
|
||||
return
|
||||
|
||||
session_id = _opc_authentication_token_str(self.client)
|
||||
self.info(
|
||||
f'OPC disconnecting opc_server_id={self.id} session_id={session_id}',
|
||||
self.metadata,
|
||||
)
|
||||
await self.emit_metric(metrics.OPC_SESSION_CLOSED_TOTAL, self._opc_debug_tags(session_id))
|
||||
|
||||
errors = await self._disconnection_fallback()
|
||||
if errors:
|
||||
await self.send_notification_async(
|
||||
metadata=self.metadata,
|
||||
notification_id=f'OPC_DISCONNECTION_ERROR_{self.id}',
|
||||
message='Failed to disconnect from OPC server in 5 attempts.',
|
||||
block='opc_repository',
|
||||
level=NotificationLevel.ERROR,
|
||||
attachment_content=json.dumps(errors, indent=4),
|
||||
)
|
||||
else:
|
||||
self.warning(f'Disconnected from OPC server {self.id} successfully', self.metadata)
|
||||
|
||||
await self.emit_metric(
|
||||
metric_object=metrics.OPC_CONNECTION_STATUS,
|
||||
method='set',
|
||||
tags={
|
||||
'pod_id': self.pod_id,
|
||||
'server_name': self.server_name,
|
||||
'server_url': self.url,
|
||||
},
|
||||
value=0,
|
||||
)
|
||||
self.client = None
|
||||
|
||||
async def _reconnect_locked(self) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Close the current session and open a new one.
|
||||
|
||||
Caller must hold _connection_lock. Records last_reconnection_time for interval gating.
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: Result from _connect_locked after teardown.
|
||||
"""
|
||||
self.last_reconnection_time = datetime.now()
|
||||
await self._disconnect_locked()
|
||||
return await self._connect_locked()
|
||||
|
||||
async def connect(self) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Open an OPC UA session under the connection lock (worker initialization).
|
||||
"""
|
||||
async with self._connection_lock:
|
||||
self.info(
|
||||
f'Starting connection to OPC server {self.id}:{self.server_name}...',
|
||||
self.metadata,
|
||||
)
|
||||
return await self._connect_locked()
|
||||
|
||||
async def disconnect(self) -> None:
|
||||
"""
|
||||
Gracefully disconnect from the OPC server under the connection lock.
|
||||
|
||||
Disables background reconnect so late writes during worker shutdown do not
|
||||
respawn sessions.
|
||||
"""
|
||||
async with self._connection_lock:
|
||||
self._allow_reconnect = False
|
||||
await self._disconnect_locked()
|
||||
|
||||
async def validate_connection(self) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Read-only check that the asyncua protocol is open.
|
||||
|
||||
Caller must ensure _session_ready before writing. Does not connect or reconnect.
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: (True, {}) when open, otherwise (False, error).
|
||||
"""
|
||||
if self._is_session_open():
|
||||
return True, {}
|
||||
self.error(f'OPC server {self.id} is not connected', self.metadata)
|
||||
return False, self._not_connected_error()
|
||||
|
||||
def _reconnect_task_in_progress(self) -> bool:
|
||||
"""
|
||||
Return whether a background reconnect task is currently running.
|
||||
|
||||
Return:
|
||||
bool: True when a reconnect task exists and has not finished.
|
||||
"""
|
||||
return self._reconnect_task is not None and not self._reconnect_task.done()
|
||||
|
||||
async def _start_reconnect(self, reason: str, session_id: str) -> None:
|
||||
"""
|
||||
Schedule a background reconnect when allowed by interval and task state.
|
||||
|
||||
Clears _session_ready before starting the task. No-op when _allow_reconnect is
|
||||
False, the reconnection window has not elapsed, or a reconnect is already running.
|
||||
|
||||
Args:
|
||||
reason (str): Trigger for reconnect (OPC status name or synthetic reason).
|
||||
session_id (str): Session token before failure.
|
||||
"""
|
||||
if not self._allow_reconnect:
|
||||
return
|
||||
if not self._reconnection_window_elapsed():
|
||||
self.warning(
|
||||
f'OPC reconnect skipped reason=reconnection_window opc_server_id={self.id} '
|
||||
f'reconnect_reason={reason}',
|
||||
self.metadata,
|
||||
)
|
||||
return
|
||||
if self._reconnect_task_in_progress():
|
||||
self.warning(
|
||||
f'OPC reconnect skipped reason=in_progress opc_server_id={self.id} '
|
||||
f'reconnect_reason={reason}',
|
||||
self.metadata,
|
||||
)
|
||||
return
|
||||
|
||||
self._session_ready.clear()
|
||||
self.info(
|
||||
f'OPC reconnect scheduled reconnect_reason={reason} opc_server_id={self.id} '
|
||||
f'old_session_id={session_id}',
|
||||
self.metadata,
|
||||
)
|
||||
self._reconnect_task = asyncio.create_task(self._run_reconnect(reason, session_id))
|
||||
|
||||
async def _run_reconnect(self, reason: str, session_id: str) -> None:
|
||||
"""
|
||||
Background task that tears down and re-establishes the OPC UA session.
|
||||
|
||||
Args:
|
||||
reason (str): Trigger for reconnect (OPC status or ProtocolClosed).
|
||||
session_id (str): Previous session token string for logging.
|
||||
"""
|
||||
try:
|
||||
async with self._connection_lock:
|
||||
self.info(
|
||||
f'OPC reconnect started reconnect_reason={reason} opc_server_id={self.id} '
|
||||
f'old_session_id={session_id}',
|
||||
self.metadata,
|
||||
)
|
||||
success, error = await self._reconnect_locked()
|
||||
if not success:
|
||||
self.error(
|
||||
f'OPC reconnect failed reconnect_reason={reason} opc_server_id={self.id}',
|
||||
self.metadata,
|
||||
)
|
||||
if error:
|
||||
self.error(error.get('message', ''), self.metadata)
|
||||
except Exception:
|
||||
self.error(
|
||||
f'OPC reconnect task failed opc_server_id={self.id} reconnect_reason={reason}',
|
||||
self.metadata,
|
||||
)
|
||||
self.error(traceback.format_exc(), self.metadata)
|
||||
|
||||
async def _log_write_inter_arrival(self, session_id: str, node: str) -> None:
|
||||
"""
|
||||
Log elapsed wall time since the previous successful OPC write on this repository.
|
||||
|
||||
Args:
|
||||
session_id (str): Current OPC UA session token string.
|
||||
node (str): Node id written in this operation.
|
||||
"""
|
||||
now = time.monotonic()
|
||||
if self._last_write_mono is not None:
|
||||
delta_s = now - self._last_write_mono
|
||||
self.info(
|
||||
f'OPC write inter-arrival_s={delta_s:.6f} opc_server_id={self.id} '
|
||||
f'session_id={session_id} node={node}',
|
||||
self.metadata,
|
||||
)
|
||||
if self.client is not None:
|
||||
session_timeout_ms = float(self.client.session_timeout)
|
||||
if session_timeout_ms > 0 and delta_s > (session_timeout_ms / 1000.0):
|
||||
await self.emit_metric(
|
||||
metrics.OPC_WRITE_INTER_ARRIVAL_OVER_SESSION_TIMEOUT_TOTAL,
|
||||
self._opc_debug_tags(session_id),
|
||||
)
|
||||
self._last_write_mono = now
|
||||
|
||||
async def _emit_opc_write_metric(
|
||||
self, session_id: str, result: str, metadata: dict[str, Any] | None
|
||||
) -> None:
|
||||
"""
|
||||
Emit opc_write_attempts_total for a single write attempt outcome.
|
||||
|
||||
Args:
|
||||
session_id (str): OPC UA session token string, or "unknown".
|
||||
result (str): Outcome label (OK, OPC status name, ProtocolClosed, etc.).
|
||||
metadata (dict[str, Any] | None): Write context for model_id/model_name labels.
|
||||
"""
|
||||
await self.emit_metric(
|
||||
metrics.OPC_WRITE_ATTEMPTS_TOTAL,
|
||||
{
|
||||
**self._opc_debug_tags(session_id),
|
||||
**_model_labels_from_write_metadata(metadata),
|
||||
'result': result,
|
||||
},
|
||||
)
|
||||
|
||||
def _write_failure_payload(
|
||||
self,
|
||||
notification_id: str,
|
||||
message: str,
|
||||
level: NotificationLevel = NotificationLevel.ERROR,
|
||||
attachment_content: str | None = None,
|
||||
opc_error_kind: str | None = None,
|
||||
opc_status: str | None = None,
|
||||
) -> dict[str, Any]:
|
||||
"""
|
||||
Build a structured error dict returned from failed write_data paths.
|
||||
|
||||
Args:
|
||||
notification_id (str): Stable notification identifier.
|
||||
message (str): Human-readable failure message.
|
||||
level (NotificationLevel): Severity for downstream notifications.
|
||||
attachment_content (str | None): Optional traceback or diagnostic text.
|
||||
opc_error_kind (str | None): Classifier (session_bad, connection_lost, etc.).
|
||||
opc_status (str | None): OPC UA status name or synthetic reason.
|
||||
|
||||
Return:
|
||||
dict[str, Any]: Error payload consumed by the OPC activity layer.
|
||||
"""
|
||||
payload: dict[str, Any] = {
|
||||
'notification_id': notification_id,
|
||||
'message': message,
|
||||
'block': 'opc_repository',
|
||||
'level': level,
|
||||
}
|
||||
if attachment_content is not None:
|
||||
payload['attachment_content'] = attachment_content
|
||||
if opc_error_kind is not None:
|
||||
payload['opc_error_kind'] = opc_error_kind
|
||||
if opc_status is not None:
|
||||
payload['opc_status'] = opc_status
|
||||
return payload
|
||||
|
||||
async def _handle_tier1_bad(
|
||||
self,
|
||||
exc: BaseException,
|
||||
session_id: str,
|
||||
node: str,
|
||||
metadata: dict[str, Any],
|
||||
phase: str,
|
||||
) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Record metrics/logs and schedule reconnect after a Tier-1 Bad* error.
|
||||
|
||||
Args:
|
||||
exc (BaseException): Tier-1 OPC UA error.
|
||||
session_id (str): Session token at failure time.
|
||||
node (str): Node id being written.
|
||||
metadata (dict[str, Any]): Write context.
|
||||
phase (str): get_node or write_value.
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: Always (False, error payload).
|
||||
"""
|
||||
opc_status = _opc_status_from_exception(exc)
|
||||
trace = traceback.format_exc()
|
||||
self.error(trace, metadata)
|
||||
await self._emit_opc_write_metric(session_id, opc_status, metadata)
|
||||
self.error(
|
||||
f'OPC write failed opc_status={opc_status} opc_server_id={self.id} '
|
||||
f'session_id={session_id} model_id={metadata.get("model_id", "unknown")} '
|
||||
f'model_name={metadata.get("model_name", "unknown")} node={node} phase={phase}',
|
||||
metadata,
|
||||
)
|
||||
await self._start_reconnect(opc_status, session_id)
|
||||
return False, self._write_failure_payload(
|
||||
notification_id=f'OPC_WRITE_DATA_ERROR_{self.id}',
|
||||
message=f'Failed to {phase} on OPC server: {exc} | metadata: {metadata}',
|
||||
attachment_content=trace,
|
||||
opc_error_kind='session_bad',
|
||||
opc_status=opc_status,
|
||||
)
|
||||
|
||||
async def _write_reconnect_in_progress(
|
||||
self, metadata: dict[str, Any]
|
||||
) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Fail a write because a background reconnect task is already running.
|
||||
|
||||
Args:
|
||||
metadata (dict[str, Any]): Write context passed through to the activity.
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: (False, error info with opc_error_kind reconnect_in_progress).
|
||||
"""
|
||||
await self._emit_opc_write_metric('unknown', 'ReconnectInProgress', metadata)
|
||||
self.warning(
|
||||
f'OPC write rejected reconnect_in_progress opc_server_id={self.id} '
|
||||
f'model_id={metadata.get("model_id", "unknown")} '
|
||||
f'model_name={metadata.get("model_name", "unknown")}',
|
||||
metadata,
|
||||
)
|
||||
return False, {
|
||||
'notification_id': f'OPC_WRITE_RECONNECT_IN_PROGRESS_{self.id}',
|
||||
'message': f'OPC write skipped: reconnect in progress | metadata: {metadata}',
|
||||
'block': 'opc_repository',
|
||||
'level': NotificationLevel.WARNING,
|
||||
'opc_error_kind': 'reconnect_in_progress',
|
||||
}
|
||||
|
||||
async def _write_connection_lost(
|
||||
self, metadata: dict[str, Any], opc_status: str
|
||||
) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Fail a write after scheduling reconnect for a closed or stale session.
|
||||
|
||||
Args:
|
||||
metadata (dict[str, Any]): Write context passed through to the activity.
|
||||
opc_status (str): Synthetic reason (ProtocolClosed, SessionNotReady).
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: (False, error info with opc_error_kind connection_lost).
|
||||
"""
|
||||
await self._emit_opc_write_metric('unknown', opc_status, metadata)
|
||||
return False, self._write_failure_payload(
|
||||
notification_id=f'OPC_WRITE_CONNECTION_LOST_{self.id}',
|
||||
message=f'OPC write skipped: connection lost ({opc_status}) | metadata: {metadata}',
|
||||
level=NotificationLevel.WARNING,
|
||||
opc_error_kind='connection_lost',
|
||||
opc_status=opc_status,
|
||||
)
|
||||
|
||||
async def write_data(
|
||||
self, node: str, value: Any, data_type: str, metadata: dict[str, Any]
|
||||
) -> tuple[bool, dict[str, Any]]:
|
||||
"""
|
||||
Write data to OPC server with a single attempt and background reconnect scheduling.
|
||||
|
||||
Reconnect is scheduled on Tier-1 Bad*, closed protocol, or stale session readiness.
|
||||
There is no retry within the same call.
|
||||
|
||||
Args:
|
||||
node (str): OPC UA node id to write.
|
||||
value (Any): Value to convert and send.
|
||||
data_type (str): Logical type key (float, int, bool, str, double).
|
||||
metadata (dict[str, Any]): Activity context (model_id, model_name, etc.).
|
||||
|
||||
Return:
|
||||
tuple[bool, dict[str, Any]]: (True, {response_time}) on success, or
|
||||
(False, structured error info) on failure.
|
||||
"""
|
||||
if self._reconnect_task_in_progress():
|
||||
return await self._write_reconnect_in_progress(metadata)
|
||||
|
||||
if not self._session_ready.is_set():
|
||||
session_id = _opc_authentication_token_str(self.client)
|
||||
await self._start_reconnect('SessionNotReady', session_id)
|
||||
if self._reconnect_task_in_progress():
|
||||
return await self._write_reconnect_in_progress(metadata)
|
||||
return await self._write_connection_lost(metadata, 'SessionNotReady')
|
||||
|
||||
is_connected, _error = await self.validate_connection()
|
||||
if not is_connected:
|
||||
session_id = _opc_authentication_token_str(self.client)
|
||||
await self._start_reconnect('ProtocolClosed', session_id)
|
||||
return await self._write_connection_lost(metadata, 'ProtocolClosed')
|
||||
|
||||
start_time = time.time()
|
||||
session_id = _opc_authentication_token_str(self.client)
|
||||
|
||||
try:
|
||||
node_obj = self.client.get_node(node) # type: ignore[union-attr]
|
||||
except Exception as e:
|
||||
if is_reconnectable_opcua_bad(e):
|
||||
return await self._handle_tier1_bad(e, session_id, node, metadata, 'get_node')
|
||||
trace = traceback.format_exc()
|
||||
self.error(trace, metadata)
|
||||
await self._emit_opc_write_metric(
|
||||
session_id, f'GetNodeError:{type(e).__name__}', metadata
|
||||
)
|
||||
return False, self._write_failure_payload(
|
||||
notification_id=f'OPC_WRITE_GET_NODE_ERROR_{self.id}',
|
||||
message=f'Failed to get node from OPC server: {e} | metadata: {metadata}',
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
if data_type not in data_type_map:
|
||||
await self._emit_opc_write_metric(session_id, 'UnsupportedDataType', metadata)
|
||||
return False, self._write_failure_payload(
|
||||
notification_id=f'OPC_WRITE_DATA_TYPE_ERROR_{self.id}',
|
||||
message=f'Unsupported data type: {data_type} | metadata: {metadata}',
|
||||
)
|
||||
|
||||
data = data_type_map[data_type]['converter'](value)
|
||||
self.info(f'Writing {data} - {type(data)} to {node}', metadata)
|
||||
ua_data = DataValue(
|
||||
Variant(data, data_type_map[data_type]['opc_type']),
|
||||
)
|
||||
|
||||
try:
|
||||
await node_obj.write_value(ua_data)
|
||||
end_time = time.time()
|
||||
response_time = end_time - start_time
|
||||
except Exception as e:
|
||||
if is_reconnectable_opcua_bad(e):
|
||||
return await self._handle_tier1_bad(e, session_id, node, metadata, 'write_value')
|
||||
trace = traceback.format_exc()
|
||||
self.error(trace, metadata)
|
||||
await self._emit_opc_write_metric(session_id, type(e).__name__, metadata)
|
||||
return False, self._write_failure_payload(
|
||||
notification_id=f'OPC_WRITE_DATA_ERROR_{self.id}',
|
||||
message=f'Failed to write data to OPC server: {e} | metadata: {metadata}',
|
||||
attachment_content=trace,
|
||||
)
|
||||
|
||||
await self._emit_opc_write_metric(session_id, 'OK', metadata)
|
||||
await self._log_write_inter_arrival(session_id, node)
|
||||
|
||||
return True, {
|
||||
'response_time': response_time,
|
||||
}
|
||||
0
laborious/worker/__init__.py
Normal file
0
laborious/worker/__init__.py
Normal file
336
laborious/worker/worker.py
Normal file
336
laborious/worker/worker.py
Normal file
@@ -0,0 +1,336 @@
|
||||
"""
|
||||
Laborious Worker Module
|
||||
|
||||
This module provides the main worker implementation for the Sientia DataOps Laborious system.
|
||||
It orchestrates Temporal workers, manages task queues, and handles the lifecycle of
|
||||
prediction and retraining workflows.
|
||||
|
||||
The worker supports multiple runtime-scoped task queues (via ``sientia_do.temporal.worker.prepare_worker``):
|
||||
- predictions_batch-{runtime}-queue: Batch prediction workflows (heavy workload)
|
||||
- minimal_retrain-{runtime}-queue: Model retraining workflows
|
||||
- drift-{runtime}-queue: Drift detection workflows
|
||||
- simple_metrics-{runtime}-queue: Simple metrics workflows
|
||||
- import_model-{runtime}-queue: `.sientia` model import — registered **only** when
|
||||
``IMPORT_MODEL_ENABLED`` is truthy, so the containment boundary stays a deployment decision
|
||||
|
||||
``RUNTIME`` must be set; it is passed to every ``prepare_worker`` call. Schedulers must use the
|
||||
same queue names (breaking change vs legacy ``drift-queue`` / ``simple_metrics-queue``).
|
||||
|
||||
Key Features:
|
||||
- Resource-based scaling with WorkerTuner (CPU and memory aware)
|
||||
- Automatic polling scaling with PollerBehaviorAutoscaling
|
||||
- Prometheus metrics integration
|
||||
- Comprehensive error handling and logging
|
||||
- Graceful shutdown with cleanup
|
||||
- Multiple worker instances for different workflow types
|
||||
|
||||
Environment Variables:
|
||||
- RUNTIME: Required non-empty string; suffix for all task queue names
|
||||
- TEMPORAL_HOST: Temporal server address (default: localhost:7233)
|
||||
- TEMPORAL_NAMESPACE: Temporal namespace (default: laborious)
|
||||
- POD_ID: Kubernetes pod identifier for metrics
|
||||
- HTTP_METRICS_PORT: Prometheus metrics server port (default: 9090)
|
||||
- HTTP_SDK_METRICS_PORT: Temporal SDK metrics port (default: 9091)
|
||||
- PROJECT_NAME: Project name for notifications (default: laborious)
|
||||
- IMPORT_MODEL_ENABLED: register the fifth (import) worker; unset by default
|
||||
- IMPORT_PASSWORD_KEY / IMPORT_BUNDLE_* / IMPORT_STATUS_DB_*: import configuration, see
|
||||
``laborious.utils.connectors_config``
|
||||
"""
|
||||
|
||||
from temporalio import client, workflow
|
||||
from temporalio.runtime import PrometheusConfig, Runtime, TelemetryConfig
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
import asyncio
|
||||
import os
|
||||
import sys
|
||||
|
||||
from prometheus_client import start_http_server
|
||||
from sientia_do.notifications.handlers import CoreNotificationHandler as NotificationHandler
|
||||
from sientia_do.observability.logger import get_logger
|
||||
from sientia_do.temporal.worker.prepare_worker import prepare_worker
|
||||
from sientia_do.utils.connectors_config import (
|
||||
build_api_config,
|
||||
build_mongodb_config,
|
||||
build_postgres_config,
|
||||
)
|
||||
|
||||
from laborious import metrics
|
||||
from laborious.activities.activities import Activities
|
||||
from laborious.utils.connectors_config import (
|
||||
build_import_config,
|
||||
build_import_status_config,
|
||||
build_minio_config,
|
||||
build_mlflow_config,
|
||||
build_opc_config,
|
||||
)
|
||||
from laborious.workflows.drift import Drift
|
||||
from laborious.workflows.import_model import ImportModel
|
||||
from laborious.workflows.minimal_retrain import MinimalRetrain
|
||||
from laborious.workflows.predictions_batch import PredictionsBatch
|
||||
from laborious.workflows.simple_metrics import SimpleMetrics
|
||||
from laborious.workflows.sub_workflows.format_and_export_prediction import (
|
||||
FormatAndExportPrediction,
|
||||
)
|
||||
from laborious.workflows.sub_workflows.prediction_process import PredictionProcess
|
||||
|
||||
POD_ID = os.getenv('HOSTNAME')
|
||||
SDK_METRICS_PORT = int(os.getenv('HTTP_SDK_METRICS_PORT', '9091'))
|
||||
|
||||
|
||||
async def main():
|
||||
"""
|
||||
Main entry point for the Laborious worker application.
|
||||
|
||||
This function initializes and starts all components of the worker:
|
||||
1. Sets up logging and metadata
|
||||
2. Starts Prometheus metrics server
|
||||
3. Initializes notification handler
|
||||
4. Creates and configures activities
|
||||
5. Initializes OPC connections
|
||||
6. Starts Temporal client and workers
|
||||
7. Manages worker lifecycle and graceful shutdown
|
||||
|
||||
The function runs indefinitely until interrupted or an error occurs.
|
||||
On error, it performs cleanup and exits with a non-zero status code.
|
||||
|
||||
Raises:
|
||||
Exception: Any unhandled exception during worker execution
|
||||
SystemExit: On graceful shutdown or error conditions
|
||||
"""
|
||||
host = os.getenv('TEMPORAL_HOST', 'localhost:7233')
|
||||
logger = get_logger(__name__)
|
||||
|
||||
metadata = {
|
||||
'pod_id': POD_ID,
|
||||
'model_name': '-',
|
||||
'model_id': '-',
|
||||
'workflow_name': '-',
|
||||
'schedule_name': '-',
|
||||
}
|
||||
|
||||
logger.custom_info(f'Starting Worker with POD_ID: {POD_ID}', metadata)
|
||||
|
||||
runtime = os.getenv('RUNTIME', '').strip()
|
||||
if not runtime:
|
||||
logger.custom_critical(
|
||||
'RUNTIME environment variable is required and must be non-empty',
|
||||
metadata,
|
||||
)
|
||||
metrics.APP_UP.labels(pod_id=POD_ID).set(0)
|
||||
sys.exit(1)
|
||||
|
||||
metadata_runtime = {**metadata, 'runtime': runtime}
|
||||
|
||||
logger.custom_info('Starting prometheus client...', metadata_runtime)
|
||||
start_prometheus_server()
|
||||
|
||||
logger.custom_info('Starting Notification Handler...', metadata_runtime)
|
||||
|
||||
mongo_config = build_mongodb_config()
|
||||
notification_handler = NotificationHandler(
|
||||
connection_string=mongo_config['connection_string'],
|
||||
database=mongo_config['database_name'],
|
||||
logger=logger,
|
||||
project_name=os.getenv('PROJECT_NAME', 'laborious'),
|
||||
)
|
||||
|
||||
logger.custom_info('Starting Activities...', metadata_runtime)
|
||||
|
||||
activities = Activities(
|
||||
postgres_config=build_postgres_config(),
|
||||
mlflow_config=build_mlflow_config(),
|
||||
minio_config=build_minio_config(),
|
||||
opc_config=build_opc_config(),
|
||||
pi_web_api_config=build_api_config(),
|
||||
logger=logger,
|
||||
notification_handler=notification_handler,
|
||||
mongo_config=mongo_config,
|
||||
import_config=build_import_config(),
|
||||
import_status_config=build_import_status_config(),
|
||||
)
|
||||
|
||||
logger.custom_info('Initializing OPC...', metadata_runtime)
|
||||
await activities.init_opc()
|
||||
|
||||
logger.custom_info(
|
||||
f'Starting SDK Metrics Server on port {SDK_METRICS_PORT}...',
|
||||
metadata_runtime,
|
||||
)
|
||||
|
||||
new_runtime = Runtime(
|
||||
telemetry=TelemetryConfig(
|
||||
metrics=PrometheusConfig(bind_address=f'0.0.0.0:{SDK_METRICS_PORT}')
|
||||
)
|
||||
)
|
||||
|
||||
logger.custom_info(f'Starting Temporal Client at {host}...', metadata_runtime)
|
||||
|
||||
temporal_client = await client.Client.connect(
|
||||
target_host=host,
|
||||
namespace=os.getenv('TEMPORAL_NAMESPACE', 'laborious'),
|
||||
runtime=new_runtime,
|
||||
)
|
||||
|
||||
logger.custom_info(f'Starting Workers (runtime={runtime})...', metadata_runtime)
|
||||
|
||||
workers = [
|
||||
prepare_worker(
|
||||
temporal_client=temporal_client,
|
||||
main_workflow=MinimalRetrain,
|
||||
other_workflows=[],
|
||||
activities=[
|
||||
activities.load_query_with_minio_offload,
|
||||
activities.retrain_model,
|
||||
activities.update_production_model,
|
||||
activities.format_retrain_report,
|
||||
activities.export_data_to_postgres,
|
||||
],
|
||||
logger=logger,
|
||||
runtime=runtime,
|
||||
),
|
||||
prepare_worker(
|
||||
temporal_client=temporal_client,
|
||||
main_workflow=SimpleMetrics,
|
||||
other_workflows=[],
|
||||
activities=[
|
||||
activities.load_custom_query,
|
||||
activities.calculate_simple_metrics,
|
||||
activities.export_data_to_postgres,
|
||||
],
|
||||
logger=logger,
|
||||
runtime=runtime,
|
||||
),
|
||||
prepare_worker(
|
||||
temporal_client=temporal_client,
|
||||
main_workflow=Drift,
|
||||
other_workflows=[],
|
||||
activities=[
|
||||
activities.load_custom_query,
|
||||
activities.get_reference_data,
|
||||
activities.calculate_drift,
|
||||
activities.export_data_to_postgres,
|
||||
],
|
||||
logger=logger,
|
||||
runtime=runtime,
|
||||
),
|
||||
prepare_worker(
|
||||
temporal_client=temporal_client,
|
||||
main_workflow=PredictionsBatch,
|
||||
other_workflows=[PredictionProcess, FormatAndExportPrediction],
|
||||
activities=[
|
||||
# MLFlow
|
||||
activities.request_predict,
|
||||
activities.request_transform,
|
||||
# Gates
|
||||
activities.input_gate,
|
||||
activities.mlflow_response_gate,
|
||||
activities.mlflow_content_gate,
|
||||
activities.format_transformed_data,
|
||||
activities.format_prediction,
|
||||
activities.format_default_prediction,
|
||||
# OPC
|
||||
activities.write_opc_data,
|
||||
# Postgres / MinIO offload
|
||||
activities.load_query_with_minio_offload,
|
||||
activities.cleanup_minio_objects_expired,
|
||||
activities.repeat_last_prediction,
|
||||
activities.export_data_to_postgres,
|
||||
activities.export_payload_to_postgres,
|
||||
activities.write_metrics,
|
||||
# Pi Web API
|
||||
activities.write_pi_web_api_data,
|
||||
],
|
||||
logger=logger,
|
||||
runtime=runtime,
|
||||
),
|
||||
]
|
||||
|
||||
# The fifth worker is opt-in: containment (QTZPOC-19) wants the importer in its own runtime with
|
||||
# its own credentials, and a flag lets that be a deployment decision instead of forcing every
|
||||
# Laborious runtime to poll the import queue today. Unset, the four workers above are unaffected
|
||||
# and no import queue is polled at all.
|
||||
if os.getenv('IMPORT_MODEL_ENABLED', '').strip().lower() in ('1', 'true', 'yes', 'on'):
|
||||
logger.custom_info('Import model worker enabled', metadata_runtime)
|
||||
workers.append(
|
||||
prepare_worker(
|
||||
temporal_client=temporal_client,
|
||||
main_workflow=ImportModel,
|
||||
other_workflows=[],
|
||||
activities=[
|
||||
# Import log row (the BFF database, update-only)
|
||||
activities.claim_import_status,
|
||||
activities.record_import_status,
|
||||
activities.record_import_names,
|
||||
activities.record_import_terminal_status,
|
||||
activities.report_import_status_write_failure,
|
||||
# Bundle
|
||||
activities.download_import_bundle,
|
||||
activities.open_import_bundle,
|
||||
# MLflow provisioning
|
||||
activities.create_import_experiment,
|
||||
activities.upload_import_artifacts,
|
||||
activities.register_import_model_version,
|
||||
# The model listing
|
||||
activities.write_import_model_document,
|
||||
# Cleanup and retention
|
||||
activities.cleanup_import_files,
|
||||
activities.ensure_import_bundle_retention,
|
||||
],
|
||||
logger=logger,
|
||||
runtime=runtime,
|
||||
)
|
||||
)
|
||||
|
||||
handlers = []
|
||||
for w in workers:
|
||||
handlers.append(w.run())
|
||||
|
||||
logger.custom_info('Workers started successfully', metadata_runtime)
|
||||
|
||||
exit_code = 0
|
||||
try:
|
||||
# This will run the workers and wait for them to complete.
|
||||
# If an exception occurs in any of the worker handlers, it will be propagated here.
|
||||
await asyncio.gather(*handlers)
|
||||
except BaseException as e: # NOSONAR
|
||||
logger.custom_error(f'An unhandled exception occurred: {e}', metadata)
|
||||
exit_code = 1
|
||||
finally:
|
||||
if notification_handler:
|
||||
notification_handler.shutdown()
|
||||
if activities:
|
||||
await activities.shutdown()
|
||||
metrics.APP_UP.labels(pod_id=POD_ID).set(0) # Mark app as DOWN
|
||||
sys.exit(exit_code)
|
||||
|
||||
|
||||
def start_prometheus_server():
|
||||
"""
|
||||
Starts the Prometheus metrics server for monitoring and observability.
|
||||
|
||||
This function initializes the Prometheus HTTP server on the configured port
|
||||
and sets the application health metric to indicate the service is running.
|
||||
|
||||
The server exposes metrics that can be scraped by Prometheus for monitoring
|
||||
the health and performance of the Laborious worker.
|
||||
|
||||
Environment Variables:
|
||||
HTTP_METRICS_PORT: Port for the metrics server (default: 9090)
|
||||
POD_ID: Pod identifier for metrics labeling
|
||||
|
||||
Raises:
|
||||
SystemExit: If the metrics server fails to start
|
||||
"""
|
||||
try:
|
||||
port = int(os.getenv('HTTP_METRICS_PORT', 9090))
|
||||
start_http_server(port)
|
||||
print(f'Prometheus server started on port {port}.')
|
||||
metrics.APP_UP.labels(pod_id=POD_ID).set(1) # Mark app as UP
|
||||
except Exception as e:
|
||||
print(f'Failed to start Prometheus server: {e}')
|
||||
os._exit(1)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
asyncio.run(main())
|
||||
0
laborious/workflows/__init__.py
Normal file
0
laborious/workflows/__init__.py
Normal file
107
laborious/workflows/drift.py
Normal file
107
laborious/workflows/drift.py
Normal file
@@ -0,0 +1,107 @@
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.constants import DATETIME_FORMAT_WITH_TZ
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
|
||||
|
||||
@workflow.defn(name='drift')
|
||||
class Drift:
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Execute the drift workflow.
|
||||
|
||||
This method orchestrates the complete drift process by:
|
||||
1. Loading data using the provided custom SQL query
|
||||
2. Preparing prediction configuration and filters
|
||||
3. Delegating to the PredictionProcess workflow for ML operations
|
||||
"""
|
||||
|
||||
metadata = {
|
||||
'metadata': {
|
||||
'schedule_name': input_data['schedule_name'],
|
||||
'model_name': input_data['model_name'],
|
||||
'model_id': input_data['model_id'],
|
||||
'workflow_name': 'drift',
|
||||
}
|
||||
}
|
||||
|
||||
print(f'Input data: {input_data}', metadata)
|
||||
|
||||
model_config = input_data['model_config']
|
||||
target_name = model_config['target']
|
||||
|
||||
gathering_query = f"""
|
||||
SELECT *
|
||||
FROM "{input_data['schema']}"."{input_data['source_table_name']}"
|
||||
WHERE
|
||||
model_id = '{input_data['model_id']}' AND
|
||||
timestamp > NOW() - INTERVAL '{input_data['interval']} minutes'
|
||||
ORDER BY timestamp ASC
|
||||
""" # nosec B608 - values come from internal Temporal workflow config, not user input
|
||||
|
||||
target_data_handler = workflow.start_activity_method(
|
||||
Activities.load_custom_query,
|
||||
{
|
||||
**metadata,
|
||||
'query': gathering_query,
|
||||
'datetime_columns': ['timestamp', 'created_at'],
|
||||
'orient': 'records',
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
|
||||
reference_data_handler = workflow.start_activity_method(
|
||||
Activities.get_reference_data,
|
||||
{**metadata, 'model_name': input_data['model_name']},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
|
||||
target_data = await target_data_handler
|
||||
reference_data = await reference_data_handler
|
||||
|
||||
if not target_data:
|
||||
return
|
||||
|
||||
drift_data = await workflow.execute_local_activity_method(
|
||||
Activities.calculate_drift,
|
||||
{
|
||||
**metadata,
|
||||
'target_data': target_data,
|
||||
'reference_data': reference_data,
|
||||
'model_name': input_data['model_name'],
|
||||
'model_id': input_data['model_id'],
|
||||
'target_name': target_name,
|
||||
'drift_metrics': input_data.get(
|
||||
'drift_metrics', ['kolmogorov_smirnov', 'jensen_shannon', 'wasserstein']
|
||||
),
|
||||
'chunk_period': input_data.get('chunk_period', 'min'),
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
|
||||
if drift_data:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.export_data_to_postgres,
|
||||
{
|
||||
**metadata,
|
||||
'data': drift_data,
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['target_table_name'],
|
||||
'timestamp_conversion': {
|
||||
'column': 'timestamp',
|
||||
'format': DATETIME_FORMAT_WITH_TZ,
|
||||
},
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
416
laborious/workflows/import_model.py
Normal file
416
laborious/workflows/import_model.py
Normal file
@@ -0,0 +1,416 @@
|
||||
"""The `import_model` workflow: a `.sientia` object becomes a registered model, or a durable ERROR.
|
||||
|
||||
Shape of this workflow, and the reasons it has that shape:
|
||||
|
||||
- **The claim comes first.** The record already exists — the frontend inserted it through the BFF —
|
||||
so the workflow's first act is to take ownership of it. Everything after that failure is recorded
|
||||
*on* the record; a failed claim is recorded nowhere, because the workflow owns no row.
|
||||
- **Fail-fast, and nothing else.** No rollback, no compensation, no resume, no reconciliation, no
|
||||
`continue_as_new`. A failed import stays failed; trying again is a new import with a new upload.
|
||||
- **Only the status writes retry**, and only because `UPDATE ... SET <fixed values> WHERE id` is
|
||||
idempotent. Every provisioning call keeps `maximum_attempts=1`, because a repeated registry call or
|
||||
Mongo insert can write twice.
|
||||
- **One `finally`, two actions**: cleanup, then the single terminal write that classifies the
|
||||
outcome once. No `except` block writes a verdict of its own.
|
||||
- **The workflow holds ids, never contents.** The decrypted bundle never crosses an activity
|
||||
boundary, and the password reaches this module only as an envelope it cannot open.
|
||||
"""
|
||||
|
||||
from datetime import timedelta
|
||||
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
from laborious.activities.model_import import (
|
||||
IMPORT_STATUS_HINT_RETRY_POLICY,
|
||||
IMPORT_STATUS_RETRY_POLICY,
|
||||
derive_run_name,
|
||||
)
|
||||
from laborious.activities.model_import_errors import ImportInputError, failure_location
|
||||
from laborious.utils.bundle.steps import ImportStep
|
||||
|
||||
# `start_to_close_timeout` is per attempt. The terminal write additionally gets a
|
||||
# `schedule_to_close_timeout` larger than its retry envelope (10 attempts, ≈151 s of backoff, ≈251 s
|
||||
# if every attempt also burns its timeout) — set it smaller and Temporal cuts the retries short,
|
||||
# which is the one configuration mistake that would silently undo design D20.
|
||||
STATUS_WRITE_TIMEOUT = timedelta(seconds=10)
|
||||
STATUS_WRITE_ENVELOPE = timedelta(seconds=300)
|
||||
DOWNLOAD_TIMEOUT = timedelta(seconds=600)
|
||||
OPEN_TIMEOUT = timedelta(seconds=900)
|
||||
EXPERIMENT_TIMEOUT = timedelta(seconds=60)
|
||||
ARTIFACT_UPLOAD_TIMEOUT = timedelta(seconds=900)
|
||||
REGISTRATION_TIMEOUT = timedelta(seconds=120)
|
||||
DOCUMENT_TIMEOUT = timedelta(seconds=60)
|
||||
CLEANUP_TIMEOUT = timedelta(seconds=120)
|
||||
RETENTION_TIMEOUT = timedelta(seconds=60)
|
||||
|
||||
# Fields no import may carry. The project is a frontend concern: the model listing is the MongoDB
|
||||
# `models` document, no migrated database holds a project or model table, and nothing in this
|
||||
# repository reads a project-to-model link (design D22). An input naming one is rejected rather than
|
||||
# accepted and ignored, so no caller believes a project link was recorded. The same goes for a
|
||||
# relational target: there is none, and for a plaintext password, which does not belong in an event
|
||||
# history whatever else is true.
|
||||
REJECTED_INPUT_FIELDS = (
|
||||
'project_id',
|
||||
'project_name',
|
||||
'provisioning_target',
|
||||
'schema',
|
||||
'table_name',
|
||||
'status_table',
|
||||
'password',
|
||||
)
|
||||
|
||||
DIGEST_LENGTH = 64
|
||||
_HEX_DIGITS = frozenset('0123456789abcdef')
|
||||
|
||||
|
||||
@workflow.defn(name='import_model')
|
||||
class ImportModel:
|
||||
"""Turn an encrypted `.sientia` object in MinIO into a registered model, or into an ERROR."""
|
||||
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]) -> dict[str, Any]:
|
||||
"""Execute the import.
|
||||
|
||||
Args:
|
||||
input_data: the import request.
|
||||
Required keys:
|
||||
- import_run_id (int): primary key of the import log row the frontend inserted
|
||||
- object_key (str): the uploaded object's key
|
||||
- expected_digest (str): the SHA-256 the uploader computed for those bytes
|
||||
- password_envelope (str): the encrypted bundle password, never plaintext
|
||||
Optional keys:
|
||||
- bucket (str): defaults to the configured import bucket
|
||||
|
||||
Returns:
|
||||
dict: `import_run_id`, `run_id`, `model_name`, `version` and the model document's id.
|
||||
|
||||
Raises:
|
||||
ImportLogRowNotClaimableError: the record is not this workflow's — the run ends FAILED
|
||||
with that error type and nothing is written to any row.
|
||||
Exception: whatever failed. The record carries the failing step, its code and its
|
||||
sentence; this exception carries the technical truth.
|
||||
"""
|
||||
workflow_id = workflow.info().workflow_id
|
||||
import_run_id = self._require_import_run_id(input_data.get('import_run_id'))
|
||||
metadata: dict[str, Any] = {
|
||||
'model_name': '-',
|
||||
'model_id': str(import_run_id),
|
||||
'workflow_name': 'import_model',
|
||||
'schedule_name': '-',
|
||||
}
|
||||
base = {
|
||||
'metadata': metadata,
|
||||
'import_run_id': import_run_id,
|
||||
'workflow_id': workflow_id,
|
||||
}
|
||||
|
||||
# Class A. Outside the try/finally on purpose: a claim that matches nothing leaves this
|
||||
# workflow owning no row, so there is nothing to clean up and nothing to record.
|
||||
claim = await workflow.execute_activity_method(
|
||||
Activities.claim_import_status,
|
||||
base,
|
||||
retry_policy=IMPORT_STATUS_RETRY_POLICY,
|
||||
start_to_close_timeout=STATUS_WRITE_TIMEOUT,
|
||||
schedule_to_close_timeout=STATUS_WRITE_ENVELOPE,
|
||||
)
|
||||
|
||||
current_step = ImportStep.RECEIVED
|
||||
failed_step: str | None = None
|
||||
gate: int | None = None
|
||||
succeeded = False
|
||||
source: dict[str, Any] = {}
|
||||
result: dict[str, Any] = {'import_run_id': import_run_id}
|
||||
|
||||
try:
|
||||
self._validate_input(input_data, claim)
|
||||
|
||||
current_step = ImportStep.DOWNLOAD
|
||||
await self._hint(base, current_step)
|
||||
await self._ensure_retention(base, input_data)
|
||||
download = await workflow.execute_activity_method(
|
||||
Activities.download_import_bundle,
|
||||
{
|
||||
**base,
|
||||
'bucket': input_data.get('bucket'),
|
||||
'object_key': input_data['object_key'],
|
||||
'expected_digest': input_data['expected_digest'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=DOWNLOAD_TIMEOUT,
|
||||
)
|
||||
|
||||
current_step = ImportStep.DECRYPTION
|
||||
await self._hint(base, current_step)
|
||||
opened = await workflow.execute_activity_method(
|
||||
Activities.open_import_bundle,
|
||||
{
|
||||
**base,
|
||||
'path': download['path'],
|
||||
'password_envelope': input_data['password_envelope'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=OPEN_TIMEOUT,
|
||||
)
|
||||
source = opened['metadata']
|
||||
parameters = opened['parameters']
|
||||
model_name = source['model_name']
|
||||
metadata['model_name'] = model_name
|
||||
run_name = derive_run_name(model_name, source['model_version'])
|
||||
|
||||
# The names go on the record before anything exists in MLflow, so a person watching the
|
||||
# import list sees *which* model is being imported while it is still running.
|
||||
await self._record_names(base, source, run_name)
|
||||
|
||||
current_step = ImportStep.EXPERIMENT_CREATION
|
||||
await self._hint(base, current_step, source)
|
||||
experiment = await workflow.execute_activity_method(
|
||||
Activities.create_import_experiment,
|
||||
{**base, 'experiment_name': source['experiment_name']},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=EXPERIMENT_TIMEOUT,
|
||||
)
|
||||
|
||||
current_step = ImportStep.ARTIFACT_UPLOAD
|
||||
await self._hint(base, current_step, source)
|
||||
run = await workflow.execute_activity_method(
|
||||
Activities.upload_import_artifacts,
|
||||
{
|
||||
**base,
|
||||
'experiment_id': experiment['experiment_id'],
|
||||
'run_name': run_name,
|
||||
'extracted_dir': opened['extracted_dir'],
|
||||
'parameters': parameters,
|
||||
'source': source,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=ARTIFACT_UPLOAD_TIMEOUT,
|
||||
)
|
||||
|
||||
current_step = ImportStep.REGISTRATION
|
||||
await self._hint(base, current_step, source)
|
||||
version = await workflow.execute_activity_method(
|
||||
Activities.register_import_model_version,
|
||||
{**base, 'model_name': model_name, 'run_id': run['run_id']},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=REGISTRATION_TIMEOUT,
|
||||
)
|
||||
|
||||
current_step = ImportStep.MODEL_DOCUMENT
|
||||
await self._hint(base, current_step, source)
|
||||
document = await workflow.execute_activity_method(
|
||||
Activities.write_import_model_document,
|
||||
{
|
||||
**base,
|
||||
'model_name': model_name,
|
||||
'target': parameters['target_variable'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=DOCUMENT_TIMEOUT,
|
||||
)
|
||||
|
||||
succeeded = True
|
||||
result = {
|
||||
'import_run_id': import_run_id,
|
||||
'run_id': run['run_id'],
|
||||
'model_name': model_name,
|
||||
'version': version['version'],
|
||||
'document_id': document.get('id'),
|
||||
}
|
||||
except BaseException as error: # NOSONAR - classified once below, then re-raised untouched
|
||||
located_step, located_gate = failure_location(error)
|
||||
failed_step = located_step or current_step.value
|
||||
gate = located_gate
|
||||
raise
|
||||
finally:
|
||||
cleanup = await self._cleanup(base)
|
||||
await self._record_terminal(
|
||||
base,
|
||||
succeeded=succeeded,
|
||||
step=failed_step or current_step.value,
|
||||
gate=gate,
|
||||
source=source,
|
||||
cleanup_failed=not cleanup.get('cleaned', True),
|
||||
)
|
||||
|
||||
return result
|
||||
|
||||
# ------------------------------------------------------------------ validation
|
||||
|
||||
@staticmethod
|
||||
def _require_import_run_id(value: Any) -> int:
|
||||
"""The one check that runs before the claim, because the claim needs its result.
|
||||
|
||||
A missing or unusable id means there is no record to claim and none to write: the run ends
|
||||
FAILED with this error type, and the failure is visible in the workflow's terminal state, its
|
||||
error type, the error metric and a notification — everywhere except a row, which is the
|
||||
point.
|
||||
"""
|
||||
if isinstance(value, bool) or not isinstance(value, int) or value <= 0:
|
||||
raise ImportInputError('import_run_id must be a positive integer')
|
||||
return value
|
||||
|
||||
@staticmethod
|
||||
def _validate_input(input_data: dict[str, Any], claim: dict[str, Any]) -> None:
|
||||
"""Validate the rest of the request, and check it against the record it just claimed.
|
||||
|
||||
This runs **after** the claim so its failure lands on the record rather than only in the
|
||||
logs: by now the row is this workflow's, so a bad request is reported to the person who made
|
||||
it. Everything here fails at step `received`.
|
||||
"""
|
||||
unknown = [name for name in REJECTED_INPUT_FIELDS if name in input_data]
|
||||
if unknown:
|
||||
raise ImportInputError(
|
||||
f'the import request carries fields this workflow does not accept: '
|
||||
f'{", ".join(sorted(unknown))}'
|
||||
)
|
||||
|
||||
for required in ('object_key', 'expected_digest', 'password_envelope'):
|
||||
if not input_data.get(required):
|
||||
raise ImportInputError(f'the import request is missing {required}')
|
||||
|
||||
digest = str(input_data['expected_digest']).lower()
|
||||
if len(digest) != DIGEST_LENGTH or not set(digest) <= _HEX_DIGITS:
|
||||
raise ImportInputError('expected_digest must be a 64-character hexadecimal SHA-256')
|
||||
|
||||
object_key = input_data['object_key']
|
||||
file_name = claim.get('file_name')
|
||||
if file_name and file_name != object_key:
|
||||
raise ImportInputError('the record names a different object than the request')
|
||||
|
||||
request_digest = claim.get('request_digest')
|
||||
if request_digest and request_digest != digest:
|
||||
raise ImportInputError('the record names a different digest than the request')
|
||||
|
||||
# --------------------------------------------------------------- status writes
|
||||
|
||||
async def _hint(
|
||||
self,
|
||||
base: dict[str, Any],
|
||||
step: ImportStep,
|
||||
source: dict[str, Any] | None = None,
|
||||
) -> None:
|
||||
"""Record the step about to be attempted. A hint: its failure never fails the import."""
|
||||
try:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.record_import_status,
|
||||
{**base, 'step': step.value, 'source': source or None},
|
||||
retry_policy=IMPORT_STATUS_HINT_RETRY_POLICY,
|
||||
start_to_close_timeout=STATUS_WRITE_TIMEOUT,
|
||||
)
|
||||
except BaseException as error: # NOSONAR - a lost hint must not fail a working import
|
||||
await self._report_status_write_failure(base, error)
|
||||
|
||||
async def _record_names(
|
||||
self, base: dict[str, Any], source: dict[str, Any], run_name: str
|
||||
) -> None:
|
||||
"""Write the experiment and run names. Also a hint: the run is created either way."""
|
||||
try:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.record_import_names,
|
||||
{
|
||||
**base,
|
||||
'experiment_name': source['experiment_name'],
|
||||
'run_name': run_name,
|
||||
'source': source,
|
||||
'step': ImportStep.EXPERIMENT_CREATION.value,
|
||||
},
|
||||
retry_policy=IMPORT_STATUS_HINT_RETRY_POLICY,
|
||||
start_to_close_timeout=STATUS_WRITE_TIMEOUT,
|
||||
)
|
||||
except BaseException as error: # NOSONAR - the names are for a human reading the list
|
||||
await self._report_status_write_failure(base, error)
|
||||
|
||||
async def _record_terminal(
|
||||
self,
|
||||
base: dict[str, Any],
|
||||
*,
|
||||
succeeded: bool,
|
||||
step: str | None,
|
||||
gate: int | None,
|
||||
source: dict[str, Any],
|
||||
cleanup_failed: bool,
|
||||
) -> None:
|
||||
"""The single authoritative write, and the last thing this workflow does.
|
||||
|
||||
Its own failure is reported through the channel with the verdict it could not write, and it
|
||||
never turns a completed import into a failed one — nor masks the cause of a real failure.
|
||||
"""
|
||||
try:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.record_import_terminal_status,
|
||||
{
|
||||
**base,
|
||||
'succeeded': succeeded,
|
||||
'step': step,
|
||||
'gate': gate,
|
||||
'source': source or None,
|
||||
'cleanup_failed': cleanup_failed,
|
||||
},
|
||||
retry_policy=IMPORT_STATUS_RETRY_POLICY,
|
||||
start_to_close_timeout=STATUS_WRITE_TIMEOUT,
|
||||
schedule_to_close_timeout=STATUS_WRITE_ENVELOPE,
|
||||
)
|
||||
except BaseException as error: # NOSONAR - the outcome stands even when it cannot be written
|
||||
await self._report_status_write_failure(
|
||||
base,
|
||||
error,
|
||||
verdict=f'succeeded={succeeded} step={step} gate={gate}',
|
||||
)
|
||||
|
||||
async def _report_status_write_failure(
|
||||
self,
|
||||
base: dict[str, Any],
|
||||
error: BaseException,
|
||||
verdict: str | None = None,
|
||||
) -> None:
|
||||
"""Route a status write that could not be made through the one failure channel."""
|
||||
try:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.report_import_status_write_failure,
|
||||
{**base, 'detail': str(error), 'verdict': verdict},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=STATUS_WRITE_TIMEOUT,
|
||||
)
|
||||
except BaseException: # NOSONAR - reporting the report is where this stops
|
||||
pass
|
||||
|
||||
# ----------------------------------------------------------- side-effect steps
|
||||
|
||||
@staticmethod
|
||||
async def _ensure_retention(base: dict[str, Any], input_data: dict[str, Any]) -> None:
|
||||
"""Ensure the bundle bucket's expiry rule, without making it a reason to fail an import.
|
||||
|
||||
The rule is applied by the importer rather than assumed from a Helm value, so the acceptance
|
||||
criterion is verifiable from the code that depends on it. But a bucket policy the importer
|
||||
cannot set is an operational problem, not a bad import: failing a valid model import because
|
||||
a lifecycle API refused would be the wrong trade, so this is reported and dropped like a
|
||||
lost status hint.
|
||||
"""
|
||||
try:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.ensure_import_bundle_retention,
|
||||
{**base, 'bucket': input_data.get('bucket')},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=RETENTION_TIMEOUT,
|
||||
)
|
||||
except BaseException: # NOSONAR - retention is not a precondition of a correct import
|
||||
pass
|
||||
|
||||
@staticmethod
|
||||
async def _cleanup(base: dict[str, Any]) -> dict[str, Any]:
|
||||
"""Remove this import's temporary files. Runs on every path, before the terminal write."""
|
||||
try:
|
||||
return await workflow.execute_activity_method(
|
||||
Activities.cleanup_import_files,
|
||||
base,
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=CLEANUP_TIMEOUT,
|
||||
)
|
||||
except BaseException: # NOSONAR - cleanup never replaces the failure that brought us here
|
||||
return {'cleaned': False}
|
||||
137
laborious/workflows/minimal_retrain.py
Normal file
137
laborious/workflows/minimal_retrain.py
Normal file
@@ -0,0 +1,137 @@
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
from laborious.utils.models.minio_dataframe_payload import MinioDataFramePayload
|
||||
|
||||
|
||||
@workflow.defn(name='minimal_retrain')
|
||||
class MinimalRetrain:
|
||||
"""
|
||||
Automated model retraining workflow for the Laborious system.
|
||||
|
||||
This workflow implements a complete model retraining pipeline that loads
|
||||
training data, executes model retraining, updates production models,
|
||||
and maintains comprehensive audit trails. It's designed for automated
|
||||
model lifecycle management with minimal manual intervention.
|
||||
|
||||
The workflow provides a robust retraining process with:
|
||||
- Automated data loading from configured data sources
|
||||
- MLFlow model retraining with quality validation
|
||||
- Production model updates with version control
|
||||
- Comprehensive reporting and audit trail maintenance
|
||||
- Error handling and notification integration
|
||||
"""
|
||||
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Execute the automated model retraining workflow.
|
||||
|
||||
This method orchestrates the complete model retraining process by:
|
||||
1. Loading training data using the provided custom SQL query
|
||||
2. Executing MLFlow model retraining with the loaded data
|
||||
3. Updating production models with newly trained versions
|
||||
4. Persisting comprehensive retraining reports to database
|
||||
|
||||
The method implements comprehensive error handling and ensures all
|
||||
required parameters are properly configured before proceeding.
|
||||
|
||||
Args:
|
||||
input_data: Complete configuration for the retraining workflow
|
||||
Required keys:
|
||||
- schedule_name (str): Schedule identifier for the retraining
|
||||
- model_name (str): Name of the ML model to retrain
|
||||
- model_id (int): Unique identifier for the model version
|
||||
- query (str): SQL query for training data loading
|
||||
- schema (str, optional): Database schema for report storage
|
||||
- table_name (str, optional): Target table for retraining reports
|
||||
- datetime_columns (list[str], optional): Columns to treat as datetime
|
||||
|
||||
Returns:
|
||||
None: The workflow completes successfully when all steps finish
|
||||
|
||||
Raises:
|
||||
Exception: If any required parameters are missing or if the workflow fails
|
||||
during data loading, retraining, or model update operations
|
||||
"""
|
||||
|
||||
metadata = {
|
||||
'metadata': {
|
||||
'schedule_name': input_data['schedule_name'],
|
||||
'model_name': input_data['model_name'],
|
||||
'model_id': input_data['model_id'],
|
||||
'workflow_name': 'minimal_retrain',
|
||||
}
|
||||
}
|
||||
|
||||
model_name = input_data['model_name']
|
||||
model_config = input_data.get('model_config', {})
|
||||
|
||||
storage_result = await workflow.execute_activity_method(
|
||||
Activities.load_query_with_minio_offload,
|
||||
{
|
||||
**metadata,
|
||||
'query': input_data['query'],
|
||||
'datetime_columns': input_data.get('datetime_columns', []),
|
||||
'model_name': model_name,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=600),
|
||||
)
|
||||
|
||||
storage_payload = MinioDataFramePayload.from_dict(storage_result)
|
||||
if not storage_payload.has_data():
|
||||
raise ValueError('No data returned from query')
|
||||
|
||||
experiment_response = await workflow.execute_activity_method(
|
||||
Activities.retrain_model,
|
||||
{
|
||||
**metadata,
|
||||
'data': storage_result,
|
||||
'model_name': model_name,
|
||||
'model_config': model_config,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(hours=1),
|
||||
)
|
||||
|
||||
if experiment_response['success']:
|
||||
update_report = await workflow.execute_activity_method(
|
||||
Activities.update_production_model,
|
||||
{**metadata, 'model_name': model_name, **experiment_response},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
else:
|
||||
update_report = {}
|
||||
|
||||
report = await workflow.execute_local_activity_method(
|
||||
Activities.format_retrain_report,
|
||||
{
|
||||
**metadata,
|
||||
'experiment_response': experiment_response,
|
||||
'model_name': model_name,
|
||||
'model_id': input_data['model_id'],
|
||||
'update_report': update_report,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
await workflow.execute_activity_method(
|
||||
Activities.export_data_to_postgres,
|
||||
{
|
||||
**metadata,
|
||||
'data': report,
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['table_name'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=600),
|
||||
)
|
||||
127
laborious/workflows/predictions_batch.py
Normal file
127
laborious/workflows/predictions_batch.py
Normal file
@@ -0,0 +1,127 @@
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
|
||||
|
||||
@workflow.defn(name='predictions_batch')
|
||||
class PredictionsBatch:
|
||||
"""
|
||||
Main batch prediction workflow for the Laborious system.
|
||||
|
||||
This workflow orchestrates the complete batch prediction process, handling
|
||||
data loading, configuration management, and workflow delegation. It serves
|
||||
as the primary entry point for batch prediction operations and ensures
|
||||
proper data preparation before ML model inference.
|
||||
|
||||
The workflow implements a robust data processing pipeline with:
|
||||
- Custom SQL query execution for data loading
|
||||
- Comprehensive configuration management
|
||||
- Data quality filter application
|
||||
- MLFlow model integration
|
||||
- Workflow delegation to specialized sub-workflows
|
||||
|
||||
Workflow Execution:
|
||||
1. Data Loading: Executes custom SQL query to load prediction data
|
||||
2. Configuration Preparation: Sets up prediction parameters and filters
|
||||
3. Workflow Delegation: Spawns PredictionProcess child workflow
|
||||
4. Error Handling: Implements comprehensive error handling and retry policies
|
||||
"""
|
||||
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Execute the batch prediction workflow.
|
||||
|
||||
This method orchestrates the complete batch prediction process by:
|
||||
1. Loading data using the provided custom SQL query
|
||||
2. Preparing prediction configuration and filters
|
||||
3. Delegating to the PredictionProcess workflow for ML operations
|
||||
|
||||
The method implements comprehensive error handling and ensures all
|
||||
required parameters are properly configured before proceeding.
|
||||
|
||||
Args:
|
||||
input_data: Complete configuration for the batch prediction
|
||||
Required keys:
|
||||
- schedule_name (str): Schedule identifier for the prediction
|
||||
- model_name (str): Name of the ML model to use
|
||||
- model_id (int): Unique identifier for the model
|
||||
- query (str): SQL query for data loading
|
||||
- schema (dict, optional): Data schema definition
|
||||
- table_name (str, optional): Target table for predictions
|
||||
- input_filters (dict, optional): Data quality filters
|
||||
- mlflow_transform_filters (dict, optional): MLFlow transform filters
|
||||
- mlflow_predict_filters (dict, optional): MLFlow prediction filters
|
||||
- model_retention (int, optional): Model retention period in minutes
|
||||
- path_priority (list[str]): Decision path priority configuration
|
||||
- opc_output_config (dict, optional): OPC server export configuration
|
||||
- pi_web_api_output_config (dict, optional): PI Web API export configuration
|
||||
- datetime_columns (list[str], optional): Columns to treat as datetime
|
||||
- save_transform (bool, optional): Whether to save transformed data (default: True)
|
||||
- prediction_store_policy (str, optional): Data retention policy (default: 'lts:1')
|
||||
|
||||
Returns:
|
||||
None: The workflow completes successfully when the child workflow finishes
|
||||
|
||||
Raises:
|
||||
Exception: If any required parameters are missing or if the workflow fails
|
||||
during data loading or workflow delegation
|
||||
"""
|
||||
|
||||
metadata = {
|
||||
'metadata': {
|
||||
'schedule_name': input_data['schedule_name'],
|
||||
'model_name': input_data['model_name'],
|
||||
'model_id': input_data['model_id'],
|
||||
'workflow_name': 'predictions_batch',
|
||||
}
|
||||
}
|
||||
|
||||
# Load data using custom query with optional MinIO offload for large frames
|
||||
data = await workflow.execute_activity_method(
|
||||
Activities.load_query_with_minio_offload,
|
||||
{
|
||||
**metadata,
|
||||
'query': input_data['query'],
|
||||
'datetime_columns': input_data.get('datetime_columns', []),
|
||||
'model_name': input_data['model_name'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
|
||||
# Prepare input for prediction_process workflow
|
||||
prediction_input = {
|
||||
'metadata': metadata,
|
||||
'data': data,
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['table_name'],
|
||||
'transform_table_name': input_data['transform_table_name'],
|
||||
'model_id': input_data['model_id'],
|
||||
'model_name': input_data['model_name'],
|
||||
'input_filters': input_data.get(
|
||||
'input_filters', {'EMPTY_DATA': {'POLICY': 'STOP', 'CONFIG': {}}}
|
||||
),
|
||||
'mlflow_transform_filters': input_data.get(
|
||||
'mlflow_transform_filters', {'API_ERROR': {'POLICY': 'STOP', 'CONFIG': {}}}
|
||||
),
|
||||
'mlflow_predict_filters': input_data.get(
|
||||
'mlflow_predict_filters', {'API_ERROR': {'POLICY': 'STOP', 'CONFIG': {}}}
|
||||
),
|
||||
'model_config': input_data.get('model_config', {}),
|
||||
'path_priority': input_data.get('path_priority', ['STOP', 'CONTINUE', 'REPEAT']),
|
||||
'opc_output_config': input_data.get('opc_output_config', {}),
|
||||
'on_conflict': input_data.get('on_conflict', 'error'),
|
||||
'pi_web_api_output_config': input_data.get('pi_web_api_output_config', {}),
|
||||
'prediction_store_policy': input_data.get('prediction_store_policy', 'lts:1'),
|
||||
'save_transform': input_data.get('save_transform', True),
|
||||
}
|
||||
|
||||
# Execute prediction process workflow
|
||||
await workflow.execute_child_workflow('subworkflow.prediction_process', prediction_input)
|
||||
95
laborious/workflows/simple_metrics.py
Normal file
95
laborious/workflows/simple_metrics.py
Normal file
@@ -0,0 +1,95 @@
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.constants import DATETIME_FORMAT_WITH_TZ
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
|
||||
|
||||
@workflow.defn(name='simple_metrics')
|
||||
class SimpleMetrics:
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Execute the simple metrics workflow.
|
||||
"""
|
||||
metadata = {
|
||||
'metadata': {
|
||||
'model_id': input_data['model_id'],
|
||||
'model_name': input_data['model_name'],
|
||||
'workflow_name': 'simple_metrics',
|
||||
'schedule_name': input_data['schedule_name'],
|
||||
}
|
||||
}
|
||||
|
||||
model_id = input_data['model_id']
|
||||
interval_minutes = input_data['interval_minutes']
|
||||
|
||||
model_config = input_data['model_config']
|
||||
target_name = model_config['target']
|
||||
|
||||
query = f"""
|
||||
select p."timestamp", p.prediction, ld.value as "target"
|
||||
from "{input_data['schema']}"."{input_data['predictions_table_name']}" p
|
||||
inner join "{input_data['schema']}"."{input_data['data_table_name']}" ld
|
||||
on p."timestamp" = ld."timestamp"
|
||||
where
|
||||
p.model_id = '{model_id}' and
|
||||
p.prediction is not null and
|
||||
ld.variable = '{target_name}' and
|
||||
ld.value is not null and
|
||||
p."timestamp" >= NOW() - INTERVAL '{interval_minutes} minutes'
|
||||
order by
|
||||
p."timestamp" desc;
|
||||
""" # nosec B608 - values come from internal Temporal workflow config, not user input
|
||||
|
||||
target_data = await workflow.execute_activity_method(
|
||||
Activities.load_custom_query,
|
||||
{
|
||||
**metadata,
|
||||
'query': query,
|
||||
'datetime_columns': ['timestamp'],
|
||||
'orient': 'records',
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
|
||||
if not target_data:
|
||||
return
|
||||
|
||||
simple_metrics = await workflow.execute_local_activity_method(
|
||||
Activities.calculate_simple_metrics,
|
||||
{
|
||||
**metadata,
|
||||
'model_id': model_id,
|
||||
'target_data': target_data,
|
||||
'metrics': input_data.get('metrics', ['rmse', 'mse', 'mae', 'r2']),
|
||||
'interval_minutes': interval_minutes,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
|
||||
if not simple_metrics:
|
||||
return
|
||||
|
||||
await workflow.execute_activity_method(
|
||||
Activities.export_data_to_postgres,
|
||||
{
|
||||
**metadata,
|
||||
'data': simple_metrics,
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['target_table_name'],
|
||||
'timestamp_conversion': {
|
||||
'column': 'timestamp',
|
||||
'format': DATETIME_FORMAT_WITH_TZ,
|
||||
},
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=300),
|
||||
)
|
||||
0
laborious/workflows/sub_workflows/__init__.py
Normal file
0
laborious/workflows/sub_workflows/__init__.py
Normal file
@@ -0,0 +1,220 @@
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.constants import DATETIME_FORMAT_WITH_TZ
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
|
||||
|
||||
@workflow.defn(name='subworkflow.format_and_export_prediction')
|
||||
class FormatAndExportPrediction:
|
||||
"""
|
||||
Data formatting and export workflow for prediction results.
|
||||
|
||||
This workflow handles the final stages of the prediction pipeline, including
|
||||
data formatting, database persistence, OPC server export, and metrics recording.
|
||||
It implements flexible formatting based on prediction quality and provides
|
||||
comprehensive export capabilities to multiple destinations.
|
||||
|
||||
The workflow supports two main prediction paths:
|
||||
1. Normal Prediction: Formats and exports successful prediction results
|
||||
2. Default Prediction: Creates fallback predictions for error conditions
|
||||
|
||||
Export Destinations:
|
||||
- PostgreSQL Database: Persistent storage with timestamp conversion
|
||||
- PI Web API: Real-time industrial system integration for prediction and confidence values
|
||||
- OPC Servers: Real-time industrial system integration
|
||||
- Prometheus Metrics: Performance monitoring and operational visibility
|
||||
"""
|
||||
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Execute the prediction formatting and export workflow.
|
||||
|
||||
This method orchestrates the complete data export process by:
|
||||
1. Determining the appropriate formatting strategy based on path_flag
|
||||
2. Formatting prediction data according to quality and requirements
|
||||
3. Exporting data to PI Web API for real-time industrial access (if configured)
|
||||
4. Exporting data to OPC servers for real-time industrial access (if configured)
|
||||
5. Persisting data to PostgreSQL database with comprehensive metadata
|
||||
6. Recording performance metrics for operational monitoring
|
||||
|
||||
The method implements flexible formatting strategies:
|
||||
- Normal predictions: Full data formatting with confidence scores
|
||||
- Error predictions: Default formatting with error indicators
|
||||
- Comprehensive export: Multi-destination data distribution
|
||||
|
||||
Args:
|
||||
input_data: Complete configuration for the export workflow
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- path_flag (str | None): Decision path flag for formatting strategy
|
||||
- None: Normal prediction path with full formatting
|
||||
- Any other value: Default prediction path for error conditions
|
||||
- data (dict[str, Any]): Prediction data to format and export
|
||||
- prediction_confidence (float): Confidence score for the prediction
|
||||
- timestamp (str): ISO-formatted timestamp for the prediction
|
||||
- model_id (int): Unique identifier for the ML model
|
||||
- model_name (str): Name of the ML model
|
||||
- schema (str): Database schema for data storage
|
||||
- table_name (str): Target table for data persistence
|
||||
Optional keys:
|
||||
- opc_output_config (dict[str, Any]): OPC server export configuration
|
||||
- pi_web_api_output_config (dict[str, Any]): PI Web API export configuration
|
||||
Contains endpoint, prediction_tags, and confidence_tags mappings
|
||||
- transformed_data (dict[str, Any]): Transformed data to export separately
|
||||
Only processed when path_flag is None
|
||||
- transform_table_name (str): Target table for transformed data export
|
||||
Required if transformed_data is provided
|
||||
- prediction_store_policy (str): Data retention policy (e.g., 'lts:1', 'erl:2')
|
||||
Required when path_flag is None
|
||||
- comment (str): Operational comment or error description
|
||||
Required when path_flag is not None
|
||||
|
||||
Returns:
|
||||
None: The workflow completes successfully when all export operations finish
|
||||
|
||||
Note:
|
||||
When transformed_data is provided and path_flag is None, the workflow will:
|
||||
1. Format the transformed data using format_transformed_data
|
||||
2. Export it to a separate table (transform_table_name) asynchronously
|
||||
3. Wait for both prediction and transformed data exports to complete
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
path_flag = input_data['path_flag']
|
||||
data = input_data['data']
|
||||
transformed_data = input_data.get('transformed_data', None)
|
||||
prediction_confidence = input_data['prediction_confidence']
|
||||
|
||||
opc_output_config = input_data.get('opc_output_config', None)
|
||||
pi_web_api_output_config = input_data.get('pi_web_api_output_config', None)
|
||||
|
||||
if path_flag is None:
|
||||
# Normal prediction path: format prediction data with full metadata
|
||||
prediction = await workflow.execute_local_activity_method(
|
||||
Activities.format_prediction,
|
||||
{
|
||||
**metadata,
|
||||
'data': data,
|
||||
'timestamp': input_data['timestamp'],
|
||||
'model_id': input_data['model_id'],
|
||||
'prediction_confidence': prediction_confidence,
|
||||
'prediction_store_policy': input_data['prediction_store_policy'],
|
||||
'model_name': input_data['model_name'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
# Optionally format and export transformed data to separate table
|
||||
if transformed_data is not None:
|
||||
transformed = await workflow.execute_local_activity_method(
|
||||
Activities.format_transformed_data,
|
||||
{
|
||||
**metadata,
|
||||
'data': transformed_data,
|
||||
'model_id': input_data['model_id'],
|
||||
'model_name': input_data['model_name'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
write_transformed_handler = workflow.start_activity_method(
|
||||
Activities.export_payload_to_postgres,
|
||||
{
|
||||
**metadata,
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['transform_table_name'],
|
||||
'data': transformed,
|
||||
'timestamp_conversion': {
|
||||
'column': 'timestamp',
|
||||
'format': DATETIME_FORMAT_WITH_TZ,
|
||||
},
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
else:
|
||||
write_transformed_handler = None
|
||||
|
||||
else:
|
||||
# Error path: create default prediction with error indicators
|
||||
prediction = await workflow.execute_local_activity_method(
|
||||
Activities.format_default_prediction,
|
||||
{
|
||||
**metadata,
|
||||
'timestamp': input_data['timestamp'],
|
||||
'model_id': input_data['model_id'],
|
||||
'prediction_confidence': prediction_confidence,
|
||||
'comment': input_data['comment'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
write_transformed_handler = None
|
||||
|
||||
opc_metrics = {}
|
||||
|
||||
# write to pi web api
|
||||
if pi_web_api_output_config:
|
||||
prediction = await workflow.execute_activity_method(
|
||||
Activities.write_pi_web_api_data,
|
||||
{
|
||||
'pi_web_api_output_config': pi_web_api_output_config,
|
||||
'data': prediction,
|
||||
**metadata,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
# write to opc
|
||||
if opc_output_config:
|
||||
prediction, opc_metrics = await workflow.execute_activity_method(
|
||||
Activities.write_opc_data,
|
||||
{
|
||||
'opc_output_config': opc_output_config,
|
||||
'data': prediction,
|
||||
**metadata,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
|
||||
# write to postgres
|
||||
await workflow.execute_activity_method(
|
||||
Activities.export_data_to_postgres,
|
||||
{
|
||||
**metadata,
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['table_name'],
|
||||
'data': prediction,
|
||||
'timestamp_conversion': {'column': 'timestamp', 'format': DATETIME_FORMAT_WITH_TZ},
|
||||
'on_conflict': input_data.get('on_conflict', 'error'),
|
||||
'unique_columns': ['model_id', 'timestamp'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=180),
|
||||
)
|
||||
|
||||
if write_transformed_handler is not None:
|
||||
await write_transformed_handler
|
||||
|
||||
await workflow.execute_activity_method(
|
||||
Activities.write_metrics,
|
||||
{
|
||||
**metadata,
|
||||
'prediction': prediction,
|
||||
'opc_metrics': opc_metrics,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(seconds=60),
|
||||
)
|
||||
346
laborious/workflows/sub_workflows/prediction_process.py
Normal file
346
laborious/workflows/sub_workflows/prediction_process.py
Normal file
@@ -0,0 +1,346 @@
|
||||
from temporalio import workflow
|
||||
|
||||
with workflow.unsafe.imports_passed_through():
|
||||
from datetime import timedelta
|
||||
from typing import Any
|
||||
|
||||
from sientia_do.temporal.policies import retry_policy
|
||||
|
||||
from laborious.activities.activities import Activities
|
||||
|
||||
|
||||
@workflow.defn(name='subworkflow.prediction_process')
|
||||
class PredictionProcess:
|
||||
"""
|
||||
Core prediction processing workflow for the Laborious system.
|
||||
|
||||
This workflow implements the complete ML model inference pipeline, handling
|
||||
data quality validation, MLFlow model interactions, and prediction processing.
|
||||
It serves as the central orchestrator for all prediction operations and ensures
|
||||
data quality throughout the entire process.
|
||||
|
||||
The workflow implements a robust data processing pipeline with:
|
||||
- Data quality validation using configurable filters
|
||||
- MLFlow model transformation and prediction
|
||||
- Response validation and quality assurance
|
||||
- Flexible decision path handling
|
||||
- Comprehensive error handling and retry policies
|
||||
|
||||
Workflow Execution:
|
||||
1. Timestamp Retrieval: Gets last processed timestamp for incremental processing
|
||||
2. Input Data Gate: Applies data quality filters
|
||||
3. Path Decision: Determines processing path based on filter results
|
||||
4. MLFlow Transform: Requests data transformation using MLFlow models
|
||||
5. Response Validation: Filters transform responses for quality assurance
|
||||
6. MLFlow Prediction: Executes prediction using transformed data
|
||||
7. Content Validation: Filters prediction responses for final quality check
|
||||
8. Export Delegation: Delegates to FormatAndExportPrediction workflow
|
||||
"""
|
||||
|
||||
@workflow.run
|
||||
async def run(self, input_data: dict[str, Any]):
|
||||
"""
|
||||
Execute the prediction process workflow.
|
||||
|
||||
This method orchestrates the complete prediction processing pipeline by:
|
||||
1. Retrieving the last processed timestamp for incremental processing
|
||||
2. Applying data quality filters to validate input data
|
||||
3. Executing MLFlow model transformation and prediction
|
||||
4. Validating all responses for quality assurance
|
||||
5. Delegating to export workflow for data persistence
|
||||
|
||||
The method implements comprehensive error handling and ensures all
|
||||
data quality requirements are met before proceeding with ML operations.
|
||||
|
||||
Args:
|
||||
input_data: Complete configuration for the prediction process
|
||||
Required keys:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- data (dict): Input data for prediction processing
|
||||
- schema (dict): Data schema definition
|
||||
- table_name (str): Target table for predictions
|
||||
- model_id (str): ML model identifier
|
||||
- model_name (str): ML model name
|
||||
- input_filters (dict): Data quality filters
|
||||
- mlflow_transform_filters (dict): MLFlow transform filters
|
||||
- mlflow_predict_filters (dict): MLFlow prediction filters
|
||||
- model_retention (int): Model retention period in minutes
|
||||
- path_priority (list[str]): Decision path priority configuration
|
||||
- opc_output_config (dict, optional): OPC server export configuration
|
||||
- pi_web_api_output_config (dict, optional): PI Web API export configuration
|
||||
- save_transform (bool, optional): Whether to save transformed data (default: True)
|
||||
- prediction_store_policy (str, optional): Data retention policy (default: 'lts:1')
|
||||
|
||||
Returns:
|
||||
None: The workflow completes successfully when export workflow finishes
|
||||
|
||||
Raises:
|
||||
Exception: If any required parameters are missing or if the workflow fails
|
||||
during data processing, MLFlow operations, or workflow delegation
|
||||
|
||||
"""
|
||||
|
||||
metadata = input_data['metadata']
|
||||
data = input_data['data']
|
||||
model_id = input_data['model_id']
|
||||
model_name = input_data['model_name']
|
||||
model_config = input_data.get('model_config', {})
|
||||
save_transform = input_data.get('save_transform', True)
|
||||
|
||||
try:
|
||||
await self._run_prediction_pipeline(
|
||||
input_data,
|
||||
metadata,
|
||||
data,
|
||||
model_id,
|
||||
model_name,
|
||||
model_config,
|
||||
save_transform,
|
||||
)
|
||||
await workflow.execute_activity_method(
|
||||
Activities.cleanup_minio_objects_expired,
|
||||
{**metadata, 'data': data},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=5),
|
||||
)
|
||||
except Exception as e:
|
||||
await workflow.execute_activity_method(
|
||||
Activities.cleanup_minio_objects_expired,
|
||||
{**metadata, 'data': data},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=5),
|
||||
)
|
||||
raise e
|
||||
|
||||
async def _run_prediction_pipeline(
|
||||
self,
|
||||
input_data: dict[str, Any],
|
||||
metadata: dict[str, Any],
|
||||
data: dict[str, Any],
|
||||
model_id: str,
|
||||
model_name: str,
|
||||
model_config: dict[str, Any],
|
||||
save_transform: bool,
|
||||
) -> None:
|
||||
last_timestamp = data['last_timestamp']
|
||||
|
||||
# Apply input data quality gates
|
||||
gate_input = {
|
||||
**metadata,
|
||||
'filters': input_data['input_filters'],
|
||||
'data': data,
|
||||
'path_priority': input_data['path_priority'],
|
||||
}
|
||||
|
||||
path_flag, confidence, comment = await workflow.execute_local_activity_method(
|
||||
Activities.input_gate,
|
||||
gate_input,
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=1),
|
||||
)
|
||||
|
||||
# Handle path decision based on filter results
|
||||
if await self.path_flag_handler(
|
||||
data, path_flag, input_data, confidence, last_timestamp, comment
|
||||
):
|
||||
return
|
||||
|
||||
# Request MLFlow model transformation
|
||||
transformed_data = await workflow.execute_activity_method(
|
||||
Activities.request_transform,
|
||||
{**metadata, 'data': data, 'model_name': model_name, 'model_config': model_config},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=5),
|
||||
)
|
||||
|
||||
# Validate MLFlow transform response
|
||||
path_flag, confidence, comment = await workflow.execute_local_activity_method(
|
||||
Activities.mlflow_response_gate,
|
||||
{
|
||||
**metadata,
|
||||
'filters': input_data['mlflow_transform_filters'],
|
||||
'data': transformed_data,
|
||||
'type': 'transform',
|
||||
'path_priority': input_data['path_priority'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=1),
|
||||
)
|
||||
|
||||
# Handle path decision based on transform validation
|
||||
if await self.path_flag_handler(
|
||||
data, path_flag, input_data, confidence, last_timestamp, comment
|
||||
):
|
||||
return
|
||||
|
||||
path_flag, confidence, comment = await workflow.execute_local_activity_method(
|
||||
Activities.mlflow_content_gate,
|
||||
{
|
||||
**metadata,
|
||||
'filters': input_data['mlflow_transform_filters'],
|
||||
'data': transformed_data,
|
||||
'type': 'transform',
|
||||
'path_priority': input_data['path_priority'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=1),
|
||||
)
|
||||
|
||||
if await self.path_flag_handler(
|
||||
data, path_flag, input_data, confidence, last_timestamp, comment
|
||||
):
|
||||
return
|
||||
|
||||
predicted_data = await workflow.execute_activity_method(
|
||||
Activities.request_predict,
|
||||
{
|
||||
**metadata,
|
||||
'data': transformed_data,
|
||||
'model_name': model_name,
|
||||
'model_config': model_config,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=5),
|
||||
)
|
||||
|
||||
# Validate MLFlow prediction response
|
||||
path_flag, confidence, comment = await workflow.execute_local_activity_method(
|
||||
Activities.mlflow_response_gate,
|
||||
{
|
||||
**metadata,
|
||||
'filters': input_data['mlflow_predict_filters'],
|
||||
'data': predicted_data,
|
||||
'type': 'predict',
|
||||
'path_priority': input_data['path_priority'],
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=1),
|
||||
)
|
||||
|
||||
# Handle path decision based on prediction validation
|
||||
if await self.path_flag_handler(
|
||||
data, path_flag, input_data, confidence, last_timestamp, comment
|
||||
):
|
||||
return
|
||||
|
||||
# Delegate to export workflow for data persistence
|
||||
await workflow.execute_child_workflow(
|
||||
'subworkflow.format_and_export_prediction',
|
||||
{
|
||||
'metadata': metadata,
|
||||
'on_conflict': input_data.get('on_conflict', 'error'),
|
||||
'path_flag': path_flag,
|
||||
'data': predicted_data,
|
||||
'transformed_data': transformed_data if save_transform else None,
|
||||
'prediction_confidence': confidence,
|
||||
'timestamp': last_timestamp,
|
||||
'model_id': model_id,
|
||||
'model_name': model_name,
|
||||
'model_config': model_config,
|
||||
'opc_output_config': input_data['opc_output_config'],
|
||||
'pi_web_api_output_config': input_data['pi_web_api_output_config'],
|
||||
'schema': input_data['schema'],
|
||||
'table_name': input_data['table_name'],
|
||||
'transform_table_name': input_data['transform_table_name'],
|
||||
'comment': comment,
|
||||
'prediction_store_policy': input_data['prediction_store_policy'],
|
||||
},
|
||||
)
|
||||
|
||||
async def path_flag_handler(
|
||||
self,
|
||||
data: dict[str, Any],
|
||||
path_flag: str,
|
||||
input_data: dict,
|
||||
confidence: int,
|
||||
last_timestamp: str,
|
||||
comment: str,
|
||||
) -> bool:
|
||||
"""
|
||||
Handle path decisions based on filter results and confidence levels.
|
||||
|
||||
This method determines the appropriate action based on the path flag
|
||||
returned by data quality filters. It can stop processing, continue,
|
||||
or repeat operations based on the configured path priority.
|
||||
|
||||
Args:
|
||||
data: Input data for processing
|
||||
path_flag: Path decision from filter (STOP, CONTINUE, REPEAT)
|
||||
input_data: Complete workflow input configuration including:
|
||||
- metadata (dict): Workflow execution metadata
|
||||
- schema (str): Database schema
|
||||
- table_name (str): Target table for predictions
|
||||
- transform_table_name (str): Target table for transformed data
|
||||
- model_id (str): ML model identifier
|
||||
- model_name (str): ML model name
|
||||
- model_config (dict, optional): Model configuration
|
||||
- opc_output_config (dict, optional): OPC server export configuration
|
||||
- pi_web_api_output_config (dict, optional): PI Web API export configuration
|
||||
- prediction_store_policy (str, optional): Data retention policy
|
||||
confidence: Confidence level from filter validation
|
||||
last_timestamp: Last processed timestamp
|
||||
comment: Additional information about the filter result
|
||||
|
||||
Returns:
|
||||
bool: True if processing should stop, False to continue
|
||||
|
||||
Path Handling:
|
||||
- STOP: Terminates workflow execution
|
||||
- CONTINUE: Delegates to FormatAndExportPrediction workflow with current data
|
||||
- REPEAT: Repeats last prediction if available
|
||||
"""
|
||||
metadata = input_data['metadata']
|
||||
|
||||
schema = input_data['schema']
|
||||
table_name = input_data['table_name']
|
||||
transform_table_name = input_data['transform_table_name']
|
||||
model_id = input_data['model_id']
|
||||
model_name = input_data['model_name']
|
||||
model_config = input_data.get('model_config', {})
|
||||
|
||||
path_flag = path_flag.upper() if path_flag else ''
|
||||
|
||||
if path_flag == 'STOP':
|
||||
# Stop processing and exit workflow
|
||||
return True
|
||||
elif path_flag == 'REPEAT':
|
||||
# Repeat last prediction if available
|
||||
await workflow.execute_activity_method(
|
||||
Activities.repeat_last_prediction,
|
||||
{
|
||||
**metadata,
|
||||
'schema': schema,
|
||||
'table_name': table_name,
|
||||
'model': model_id,
|
||||
'last_timestamp': last_timestamp,
|
||||
},
|
||||
retry_policy=retry_policy,
|
||||
start_to_close_timeout=timedelta(minutes=1),
|
||||
)
|
||||
return True
|
||||
elif path_flag == 'CONTINUE':
|
||||
# call write workflow
|
||||
await workflow.execute_child_workflow(
|
||||
'subworkflow.format_and_export_prediction',
|
||||
{
|
||||
'metadata': metadata,
|
||||
'path_flag': path_flag,
|
||||
'data': data,
|
||||
'prediction_confidence': confidence,
|
||||
'timestamp': last_timestamp,
|
||||
'model_id': model_id,
|
||||
'model_name': model_name,
|
||||
'model_config': model_config,
|
||||
'schema': schema,
|
||||
'table_name': table_name,
|
||||
'transform_table_name': transform_table_name,
|
||||
'comment': comment,
|
||||
'opc_output_config': input_data['opc_output_config'],
|
||||
'pi_web_api_output_config': input_data['pi_web_api_output_config'],
|
||||
'prediction_store_policy': input_data['prediction_store_policy'],
|
||||
'on_conflict': input_data.get('on_conflict', 'error'),
|
||||
},
|
||||
)
|
||||
return True
|
||||
|
||||
return False
|
||||
Reference in New Issue
Block a user