Add laborious
This commit is contained in:
473
laborious/utils/bundle/reader.py
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473
laborious/utils/bundle/reader.py
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"""Reading a `.sientia` bundle: the seven gates, in order, in one function.
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`BundleReader.open()` is the only entry point. Gate ordering is a property of that function rather
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than of the caller, so it cannot be reordered by accident and can be unit-tested without Temporal:
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1. object-level limits (`check_object_limits`, called by the download activity before the body is
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fetched — the only gate that does not need the file)
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2. header validation, including the chunk-stream digest, before any key derivation
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3. AEAD decryption — the integrity check; a wrong password and a tampered file fail identically
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4. archive inspection over the central directory, writing nothing to disk
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5. extraction into a fresh, isolated directory
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6. structure and schema of the extracted tree
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7. content policy over the file set
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Nothing here logs, notifies or emits a metric: rejections are raised as `BundleGateError` and the
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activity layer owns the one failure channel.
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"""
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from __future__ import annotations
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import json
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import os
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import shutil
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import stat
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import time
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import unicodedata
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import zipfile
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from dataclasses import dataclass, field
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from pathlib import Path
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from typing import Any
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import nacl.bindings as sodium
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import nacl.exceptions
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from laborious.utils.bundle import format as fmt
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from laborious.utils.bundle.steps import GATE_TO_STEP, ImportStep
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# Gate 6 — the layout `bundle.build_zip` writes and `model_repository.py` reads back.
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METADATA_FILE_NAME = 'metadata.json'
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ARTIFACTS_DIR_NAME = 'artifacts'
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REQUIRED_TOP_LEVEL_KEYS = frozenset({'parameters', 'metadata'})
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REQUIRED_METADATA_FIELDS = (
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'model_name',
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'experiment_name',
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'run_id',
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'model_version',
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'model_project',
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'export_timestamp',
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)
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REQUIRED_PARAMETERS = ('target_variable',)
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REQUIRED_MODEL_DIRS = ('prediction_model', 'data_model')
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REQUIRED_MODEL_FILES = ('MLmodel', 'model.pkl')
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# The import record's `experiment_name` column is `VARCHAR(50)` with a length-3 floor, and the name
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# is written onto the record before provisioning starts — so the column's limits are enforced here,
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# not three activities later as a constraint violation.
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EXPERIMENT_NAME_MIN_LENGTH = 3
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EXPERIMENT_NAME_MAX_LENGTH = 50
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# Gate 7 — an MLflow 2.x artifact tree for this platform: the model directories' known files, the
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# model card, the CSVs the training template logs and the bundle's own metadata.
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ALLOWED_FILE_NAMES = frozenset(
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{
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'MLmodel',
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'metadata.json',
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'model.pkl',
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'conda.yaml',
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'python_env.yaml',
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'requirements.txt',
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'model_card.json',
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'model_card.svg',
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}
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)
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ALLOWED_FILE_SUFFIXES = frozenset({'.csv', '.json', '.yaml', '.yml', '.txt', '.pkl', '.svg', '.md'})
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_DECRYPT_FAILURE_MESSAGE = (
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'could not open this bundle: wrong password, or the file is damaged or was altered'
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)
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class BundleGateError(Exception):
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"""A gate rejected the bundle.
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Carries the gate number and the import step that gate maps onto, so the workflow never has to
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guess which step to record.
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"""
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def __init__(self, message: str, *, gate: int, step: ImportStep | None = None) -> None:
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super().__init__(message)
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self.gate = gate
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self.step = step if step is not None else GATE_TO_STEP[gate]
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@dataclass(frozen=True)
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class BundleLimits:
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"""Ceilings enforced by gates 1 and 4. Values come from `build_import_config()`."""
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max_object_bytes: int = 1024 * 1024 * 1024
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max_entries: int = 5000
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max_uncompressed_bytes: int = 4 * 1024 * 1024 * 1024
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max_compression_ratio: float = 200.0
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object_prefix: str = 'imported_models/'
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object_suffix: str = '.sientia'
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@dataclass(frozen=True)
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class OpenedBundle:
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"""What a bundle yields once every gate has passed. Nothing secret is carried."""
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extracted_dir: Path
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metadata: dict[str, Any] = field(default_factory=dict)
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parameters: dict[str, Any] = field(default_factory=dict)
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digest: str = ''
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header: fmt.BundleHeader | None = None
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# How long Argon2id took, so the worker's most expensive step is measurable without the
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# activity layer having to reach inside the reader.
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kdf_seconds: float = 0.0
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class BundleReader:
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"""Opens `.sientia` bundles produced by the exporter in `sientia-projects-templates`."""
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def __init__(self, limits: BundleLimits | None = None) -> None:
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self.limits = limits or BundleLimits()
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# ------------------------------------------------------------------ gate 1
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def check_object_limits(self, *, size: int, key: str) -> None:
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"""Gate 1, object level: reject before the object's body is fetched.
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Args:
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size: the object's size as reported by `stat_object`.
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key: the object key.
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Raises:
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BundleGateError: oversized object, key outside the import prefix, or wrong suffix.
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"""
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if size > self.limits.max_object_bytes:
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raise BundleGateError(
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f'uploaded object is {size} bytes, above the '
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f'{self.limits.max_object_bytes} byte limit',
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gate=1,
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)
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if size <= 0:
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raise BundleGateError('uploaded object is empty', gate=1)
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if not key.startswith(self.limits.object_prefix):
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raise BundleGateError('uploaded object is not under the import prefix', gate=1)
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if not key.endswith(self.limits.object_suffix):
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raise BundleGateError(
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f'uploaded object does not end in {self.limits.object_suffix}', gate=1
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)
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# --------------------------------------------------------------------- open
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def open(
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self,
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encrypted_path: Path | str,
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password: str,
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extract_root: Path | str,
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work_dir: Path | str | None = None,
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) -> OpenedBundle:
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"""Run gates 2 to 7 in order and return the opened bundle.
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Args:
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encrypted_path: the downloaded `.sientia` file.
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password: the plaintext bundle password. Never stored, never logged, never returned.
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extract_root: the directory to extract into. It MUST NOT exist yet (gate 5).
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work_dir: where the decrypted zip is written. Defaults to `extract_root`'s parent.
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Returns:
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OpenedBundle: extracted tree, `metadata`, `parameters`, digest and header.
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Raises:
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BundleGateError: with the gate that rejected the bundle and its import step.
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"""
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encrypted = Path(encrypted_path)
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root = Path(extract_root)
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staging = Path(work_dir) if work_dir is not None else root.parent
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header = self._gate_2_header(encrypted)
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zip_path, kdf_seconds = self._gate_3_decrypt(encrypted, password, header, staging)
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try:
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self._gate_4_inspect(zip_path)
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self._gate_5_extract(zip_path, root)
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metadata, parameters = self._gate_6_structure(root)
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self._gate_7_content_policy(root)
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except BaseException:
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# A rejection after decryption leaves nothing extracted behind (gate 5's contract) and
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# never leaves a decrypted zip on the worker for the next import to trip over.
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shutil.rmtree(root, ignore_errors=True)
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zip_path.unlink(missing_ok=True)
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raise
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zip_path.unlink(missing_ok=True)
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return OpenedBundle(
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extracted_dir=root,
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metadata=metadata,
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parameters=parameters,
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digest=header.ciphertext_digest.hex(),
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header=header,
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kdf_seconds=kdf_seconds,
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)
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# ------------------------------------------------------------------ gate 2
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def _gate_2_header(self, encrypted: Path) -> fmt.BundleHeader:
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"""Parse the header and check the chunk-stream digest, before deriving anything."""
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try:
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header = fmt.read_header(encrypted)
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fmt.verify_ciphertext_digest(encrypted, header)
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except fmt.BundleFormatError as error:
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raise BundleGateError(str(error), gate=2) from error
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except OSError as error:
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raise BundleGateError('downloaded bundle could not be read', gate=2) from error
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return header
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# ------------------------------------------------------------------ gate 3
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def _gate_3_decrypt(
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self, encrypted: Path, password: str, header: fmt.BundleHeader, staging: Path
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) -> tuple[Path, float]:
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"""Derive the key with the header's parameters and decrypt the stream to a file.
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The AEAD *is* the integrity check: a wrong password and a tampered byte fail here with the
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same message, which never claims to distinguish them.
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"""
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staging.mkdir(parents=True, exist_ok=True)
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zip_path = staging / 'bundle.zip'
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try:
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started = time.monotonic()
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key = self._derive_key(password, header)
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kdf_seconds = time.monotonic() - started
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self._pull_stream(encrypted, key, zip_path)
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except BundleGateError:
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zip_path.unlink(missing_ok=True)
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raise
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except (nacl.exceptions.CryptoError, ValueError, RuntimeError) as error:
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zip_path.unlink(missing_ok=True)
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raise BundleGateError(_DECRYPT_FAILURE_MESSAGE, gate=3) from error
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except OSError as error:
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zip_path.unlink(missing_ok=True)
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raise BundleGateError('decrypted bundle could not be written', gate=3) from error
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return zip_path, kdf_seconds
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@staticmethod
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def _derive_key(password: str, header: fmt.BundleHeader) -> bytes:
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"""Argon2id over the NFC-normalised password, with the header's own cost parameters.
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The password is normalised and **not** trimmed, matching the producer's `_derive_key`: the
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same password typed on another OS must derive the same key, while a trailing space is part
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of the secret.
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"""
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normalized = unicodedata.normalize('NFC', password)
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return sodium.crypto_pwhash_alg(
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fmt.KEY_SIZE,
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normalized.encode('utf-8'),
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header.salt,
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header.kdf_opslimit,
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header.kdf_memlimit_bytes,
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sodium.crypto_pwhash_ALG_ARGON2ID13,
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)
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@staticmethod
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def _pull_stream(encrypted: Path, key: bytes, zip_path: Path) -> None:
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"""Decrypt the chunk stream into `zip_path`, requiring the FINAL tag."""
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chunk_size = fmt.CHUNK_SIZE + fmt.ABYTES
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state = sodium.crypto_secretstream_xchacha20poly1305_state()
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with encrypted.open('rb') as source, zip_path.open('wb') as target:
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source.seek(fmt.HEADER_SIZE)
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stream_header = source.read(fmt.STREAM_HEADER_SIZE)
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sodium.crypto_secretstream_xchacha20poly1305_init_pull(state, stream_header, key)
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last_tag: int | None = None
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while chunk := source.read(chunk_size):
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plaintext, last_tag = sodium.crypto_secretstream_xchacha20poly1305_pull(
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state, chunk
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)
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target.write(plaintext)
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if last_tag != sodium.crypto_secretstream_xchacha20poly1305_TAG_FINAL:
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# A stream that stops without its FINAL tag was cut short. The digest already catches
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# truncation of a stored file; this catches a stream that was framed to look complete.
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raise BundleGateError(_DECRYPT_FAILURE_MESSAGE, gate=3)
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# ------------------------------------------------------------------ gate 4
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def _gate_4_inspect(self, zip_path: Path) -> None:
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"""Inspect the central directory only. Nothing is written to disk by this gate."""
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try:
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with zipfile.ZipFile(zip_path) as archive:
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entries = archive.infolist()
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except zipfile.BadZipFile as error:
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raise BundleGateError('bundle content is not a readable archive', gate=4) from error
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if len(entries) > self.limits.max_entries:
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raise BundleGateError(
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f'archive declares {len(entries)} entries, above the '
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f'{self.limits.max_entries} limit',
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gate=4,
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)
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if not entries:
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raise BundleGateError('archive is empty', gate=4)
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uncompressed = sum(entry.file_size for entry in entries)
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compressed = sum(entry.compress_size for entry in entries)
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if uncompressed > self.limits.max_uncompressed_bytes:
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raise BundleGateError(
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f'archive declares {uncompressed} uncompressed bytes, above the '
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f'{self.limits.max_uncompressed_bytes} limit',
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gate=4,
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)
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ratio = uncompressed / max(compressed, 1)
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if ratio > self.limits.max_compression_ratio:
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raise BundleGateError(
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f'archive compression ratio {ratio:.1f} is above the '
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f'{self.limits.max_compression_ratio} limit',
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gate=4,
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)
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for entry in entries:
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self._check_entry_name(entry.filename)
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self._check_entry_mode(entry)
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@staticmethod
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def _check_entry_name(name: str) -> None:
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"""Reject absolute names and traversal, from the declared name alone."""
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normalised = name.replace('\\', '/')
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if normalised.startswith('/') or (len(normalised) > 1 and normalised[1] == ':'):
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raise BundleGateError('archive declares an absolute entry path', gate=4)
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if any(part == '..' for part in normalised.split('/')):
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raise BundleGateError('archive declares an entry escaping its own tree', gate=4)
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@staticmethod
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def _check_entry_mode(entry: zipfile.ZipInfo) -> None:
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"""Reject symlinks and anything that is neither a regular file nor a directory."""
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mode = entry.external_attr >> 16
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if stat.S_IFMT(mode) == 0:
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# No file-type bits stored. This is the normal case for two kinds of entry: a zip
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# written by a tool that records no Unix mode at all (`mode == 0`), and
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# `ZipFile.writestr`, which stores permissions only — the producer's `metadata.json`
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# arrives as `0o600 << 16`. Nothing to check: the member is extracted as a plain file
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# with the worker's own permissions either way.
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return
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if stat.S_ISLNK(mode):
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raise BundleGateError('archive declares a symbolic link', gate=4)
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if not (stat.S_ISREG(mode) or stat.S_ISDIR(mode)):
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raise BundleGateError('archive declares an entry that is not a regular file', gate=4)
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# ------------------------------------------------------------------ gate 5
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def _gate_5_extract(self, zip_path: Path, root: Path) -> None:
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"""Extract into a fresh directory, containing every member by resolved path.
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A pre-existing extraction root is a failure rather than something to clear: it means
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another import, or a previous attempt, owns that path.
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"""
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if root.exists():
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raise BundleGateError('extraction directory already exists', gate=5)
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root.mkdir(parents=True)
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resolved_root = root.resolve()
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try:
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with zipfile.ZipFile(zip_path) as archive:
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for entry in archive.infolist():
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self._extract_member(archive, entry, root, resolved_root)
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except BundleGateError:
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shutil.rmtree(root, ignore_errors=True)
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raise
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except (OSError, zipfile.BadZipFile) as error:
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shutil.rmtree(root, ignore_errors=True)
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raise BundleGateError('bundle content could not be unpacked', gate=5) from error
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@staticmethod
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def _extract_member(
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archive: zipfile.ZipFile, entry: zipfile.ZipInfo, root: Path, resolved_root: Path
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) -> None:
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"""Write one member, re-checking containment on the resolved path."""
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name = entry.filename.replace('\\', '/')
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target = root / name
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resolved = Path(os.path.realpath(target))
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if resolved != resolved_root and resolved_root not in resolved.parents:
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raise BundleGateError('archive member resolves outside the extraction root', gate=5)
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if entry.is_dir():
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resolved.mkdir(parents=True, exist_ok=True)
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return
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if resolved.exists():
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raise BundleGateError('archive member would overwrite an existing file', gate=5)
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resolved.parent.mkdir(parents=True, exist_ok=True)
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# Written as a plain file: the archive's stored permissions are never restored, so no
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# member can arrive executable.
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with archive.open(entry) as source, resolved.open('wb') as sink:
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shutil.copyfileobj(source, sink)
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# ------------------------------------------------------------------ gate 6
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def _gate_6_structure(self, root: Path) -> tuple[dict[str, Any], dict[str, Any]]:
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"""Validate the extracted layout and the metadata schema."""
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metadata_path = root / METADATA_FILE_NAME
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artifacts_dir = root / ARTIFACTS_DIR_NAME
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if not metadata_path.is_file():
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raise BundleGateError('bundle has no metadata document at its root', gate=6)
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if not artifacts_dir.is_dir():
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raise BundleGateError('bundle has no artifacts directory', gate=6)
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||||
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document = self._load_metadata_document(metadata_path)
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metadata = document['metadata']
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parameters = document['parameters']
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||||
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self._check_metadata_fields(metadata)
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self._check_parameters(parameters)
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||||
self._check_model_directories(artifacts_dir)
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return metadata, parameters
|
||||
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@staticmethod
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||||
def _load_metadata_document(metadata_path: Path) -> dict[str, Any]:
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||||
"""Read `metadata.json` and check its two top-level keys."""
|
||||
try:
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document = json.loads(metadata_path.read_text(encoding='utf-8'))
|
||||
except (json.JSONDecodeError, UnicodeDecodeError, OSError) as error:
|
||||
raise BundleGateError('bundle metadata is not readable JSON', gate=6) from error
|
||||
if not isinstance(document, dict) or set(document) != REQUIRED_TOP_LEVEL_KEYS:
|
||||
raise BundleGateError(
|
||||
'bundle metadata does not carry exactly the parameters and metadata blocks', gate=6
|
||||
)
|
||||
if not isinstance(document['metadata'], dict) or not isinstance(
|
||||
document['parameters'], dict
|
||||
):
|
||||
raise BundleGateError('bundle metadata blocks are not objects', gate=6)
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||||
return document
|
||||
|
||||
@staticmethod
|
||||
def _check_metadata_fields(metadata: dict[str, Any]) -> None:
|
||||
"""Every origin field the import records must be present and usable."""
|
||||
for field_name in REQUIRED_METADATA_FIELDS:
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||||
value = metadata.get(field_name)
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||||
if not isinstance(value, str) or not value.strip():
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||||
raise BundleGateError(f'bundle metadata is missing the {field_name} field', gate=6)
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||||
experiment_name = metadata['experiment_name']
|
||||
if not (EXPERIMENT_NAME_MIN_LENGTH <= len(experiment_name) <= EXPERIMENT_NAME_MAX_LENGTH):
|
||||
raise BundleGateError(
|
||||
"bundle experiment name does not fit the platform's limits", gate=6
|
||||
)
|
||||
|
||||
@staticmethod
|
||||
def _check_parameters(parameters: dict[str, Any]) -> None:
|
||||
"""`target_variable` is what `model_config.target` is built from; nothing else supplies it."""
|
||||
for name in REQUIRED_PARAMETERS:
|
||||
value = parameters.get(name)
|
||||
if value is None or not str(value).strip():
|
||||
raise BundleGateError(f'bundle parameters are missing {name}', gate=6)
|
||||
|
||||
@staticmethod
|
||||
def _check_model_directories(artifacts_dir: Path) -> None:
|
||||
"""`prediction_model` and `data_model` must each be a loadable MLflow model directory."""
|
||||
for directory in REQUIRED_MODEL_DIRS:
|
||||
model_dir = artifacts_dir / directory
|
||||
if not model_dir.is_dir():
|
||||
raise BundleGateError(f'bundle has no {directory} artifacts', gate=6)
|
||||
for required in REQUIRED_MODEL_FILES:
|
||||
if not (model_dir / required).is_file():
|
||||
raise BundleGateError(f'bundle {directory} artifacts are incomplete', gate=6)
|
||||
|
||||
# ------------------------------------------------------------------ gate 7
|
||||
|
||||
def _gate_7_content_policy(self, root: Path) -> None:
|
||||
"""Only the file kinds an MLflow artifact tree calls for may be present."""
|
||||
for path in sorted(root.rglob('*')):
|
||||
if path.is_dir():
|
||||
continue
|
||||
if not path.is_file():
|
||||
raise BundleGateError('bundle contains an entry that is not a file', gate=7)
|
||||
if path.name in ALLOWED_FILE_NAMES:
|
||||
continue
|
||||
if path.suffix.lower() in ALLOWED_FILE_SUFFIXES:
|
||||
continue
|
||||
raise BundleGateError('bundle contains a file a model export should not carry', gate=7)
|
||||
Reference in New Issue
Block a user