Refactor prediction process to use execute_activity_method for MLFlow model transformation and prediction requests, enhancing consistency in workflow execution.
Update Gates and FormatAndExportPrediction classes to standardize timestamp usage
- Changed 'last_timestamp' to 'timestamp' in the Gates class for consistency in input data handling.
- Updated the FormatAndExportPrediction class to reflect the same change in the output data structure.
Update Gates and FormatAndExportPrediction classes to use 'last_timestamp' for improved data handling
- Modified the Gates class to utilize 'last_timestamp' when only one row is present, ensuring accurate timestamp assignment.
- Updated the FormatAndExportPrediction class to replace 'timestamp' with 'last_timestamp' in the output data structure.
Enhance prediction export functionality by adding 'on_conflict' and 'unique_columns' parameters to the payload initialization in FormatAndExportPrediction class.
Update dependencies and refactor input filter handling for consistency
- Updated sientia-dataops-library dependency version from 1.10.3 to 1.10.4 in requirements.txt.
- Refactored input filter handling in the Gates class to read policy and config keys in a case-insensitive manner.
- Updated test cases to ensure consistency in filter key naming conventions across various scenarios.
Refactor metrics and API handling for improved consistency and clarity
- Removed the SIENTIA_CORE_LABELS constant and replaced it with CORE_LABELS for uniformity across metrics.
- Updated the API class to ensure operation_type is always included in core labels for PI Web API metrics.
- Simplified metric tag handling in the Gates class by consolidating common tags into a single core_tags dictionary.
- Enhanced the PredictionProcess class to improve error handling and variable naming for clarity.
Update environment variables in values.yaml and enhance metric labels in metrics.py
- Changed POSTGRES_USER and POSTGRES_PASSWORD values in values.yaml for improved security.
- Added 'runtime' label to metrics in metrics.py for better environment identification.
- Updated CORE_LABELS to include 'runtime' for consistency across metrics.
- Modified type hint for data parameter in PredictionProcess to use a dictionary for better clarity.
- Adjusted tests to reflect changes in core labels and MinIO configuration.
SIENTIAPDE-1712 Update type hints in PredictionProcess to improve clarity and enforce data structure consistency. Changed `data` parameter to a dictionary type and updated the way `last_timestamp` is accessed.
Refactor MinioDataFramePayload usage across activities
- Updated instances of MinioDataFramePayload initialization in Gates, MLFlow, and Storage classes to use the new from_dict method for better data reconstruction from dictionaries.
- Enhanced the PredictionProcess workflow to utilize the updated payload handling.
- Added passthrough fixtures in tests to accommodate the new from_dict method for consistent testing behavior.
Remove code validation script and refactor imports in activities and workflows
- Deleted the `validate.sh` script, which was responsible for running code quality checks.
- Cleaned up import statements in `activities.py`, `gates.py`, `mlflow.py`, and `storage.py` by removing unused imports and organizing them.
- Refactored initialization methods in `MinioManager` and `MLFlow` classes for improved readability.
- Updated various workflows to ensure compatibility with the new structure and removed unnecessary comments.
- Enhanced test cases to accommodate changes in the activities and workflows, ensuring proper mocking of dependencies.
Implement MinIO Offload and Retention Features
- Added configuration options for MinIO retention hours and offload threshold in README.
- Introduced MinIO payload offloading for large DataFrame-derived payloads, storing them as parquet files.
- Updated activities to utilize MinIO for data loading and cleanup, including new methods for offloading and retention management.
- Refactored existing activities to integrate MinIO functionality, ensuring compatibility with previous workflows.
- Removed the legacy MinioRepository class, consolidating MinIO operations under a new manager structure.
- Updated requirements to use the latest version of the sientia-dataops-library.
Update coverage source in pyproject.toml, add testcontainers for PostgreSQL in requirements-dev.txt, increment image tag and adjust probe delays in values.yaml, and refine condition checks in format_and_export_prediction.py and mlflow.py. Additionally, enhance test coverage in test_gates.py.
Enhance README and Codebase with PI Web API Integration
- Updated README.md to include details about PI Web API integration, including configuration and export capabilities.
- Modified Activities class to incorporate PI Web API export operations and error handling.
- Added new API class for handling PI Web API interactions, including writing prediction and confidence data.
- Updated prediction workflows to support PI Web API output configuration.
- Enhanced worker and sub-workflows to include PI Web API in task queues and export processes.
- Improved documentation and error handling for PI Web API connections and configurations.
Refactor Activities and API Integration for PI Web API
- Reintroduced the API import in the Activities class for proper integration.
- Cleaned up whitespace and formatting in the API class and related tests for improved readability.
- Updated test cases to ensure consistent formatting in error messages and configuration structures for PI Web API.
- Enhanced connectors_config.py with additional whitespace for better organization.
Enhance Activities and Prediction Workflows with PI Web API Integration
- Updated the Activities class to include API integration, allowing for configuration of PI Web API parameters.
- Modified prediction workflows to support output configuration for PI Web API, enabling data writing to the API.
- Refactored connectors_config.py by removing unused PostgreSQL and MongoDB configuration functions.
- Added tests to validate the new PI Web API functionality in activities and workflows, ensuring robust integration and functionality.
Enhance data handling and export processes in Laborious workflows
- Updated `gates.py` to improve data quality validation, filtering, and formatting operations, including enhanced metrics recording.
- Refined `mlflow.py` to better manage model transformations and reference data retrieval from MLflow Model Registry.
- Enhanced `format_and_export_prediction.py` to support separate export of transformed data, improving flexibility in data handling.
- Added comprehensive test coverage for new functionalities, including transformed data formatting and retrain report generation.
- Improved documentation in `README.md` to reflect changes in activities and workflows, ensuring clarity on data processing and export paths.
SIENTIAPDE-1273
Enhance security analysis and SQL injection handling
- Added skip for potential SQL injection false positives in Bandit configuration.
- Updated validate.sh to use the pyproject.toml configuration for Bandit security analysis.
- Refactored code to replace ensure_dataframe utility with direct DataFrame usage in multiple activities, improving clarity and reducing dependencies.
- Removed the deprecated dataframe_utils module to streamline the codebase.
Refactor data export in Drift, SimpleMetrics, and FormatAndExportPrediction workflows to improve data handling. Changed the export format from a list of dictionaries to direct objects for enhanced clarity and compatibility with downstream systems.
Refactor data handling in various modules to ensure DataFrame consistency
- Replaced direct DataFrame instantiation with `ensure_dataframe` utility in Gates, MLFlow, OPC, and ModelMetrics classes to standardize data handling.
- Updated return types in several asynchronous methods to return DataFrames instead of dictionaries for improved usability.
- Adjusted data export processes in workflows to convert DataFrames to dictionaries with `to_dict(orient='records')` for compatibility with downstream systems.
Enhance MLFlowRepository and Activities classes with new methods and metrics
- Added `check_artifact_exists` method to MLFlowRepository for verifying artifact presence in the MLflow Model Registry.
- Implemented `get_prediction_data` method in MLFlowRepository to retrieve prediction data from models.
- Updated Activities class to integrate ModelMetrics for improved metrics handling.
- Enhanced tests for artifact existence checks and prediction data retrieval, ensuring robust coverage for new functionalities.
- Updated various workflows to include `transform_table_name` in input data for better data handling.
Update requirements and enhance metrics and data handling
- Updated the sientia-dataops-library dependency version in requirements.txt to 1.5.3.
- Added new metrics for model analysis, including lag, count, and error count in metrics.py.
- Implemented a new method for formatting transformed data in gates.py.
- Enhanced MLFlowRepository with methods to load artifact dataframes and calculate model metrics, including drift and performance metrics.
- Updated the prediction process to handle transformed data and ensure proper execution of related activities in format_and_export_prediction.py and prediction_process.py.
Refactor workflow names to include 'subworkflow' prefix
- Updated the workflow definitions and calls in the predictions_batch, format_and_export_prediction, and prediction_process files to use the 'subworkflow' prefix for consistency.
- Adjusted corresponding test cases to reflect these changes in workflow execution calls.
Enhance OPC Metrics Handling and Refactor Write Operations
- Updated the OPC class to return response times for write operations, improving metrics tracking.
- Refactored the Gates activity to incorporate OPC metrics into the metrics writing process.
- Adjusted the manage_output_tags method in OpcRepository to return response times for each tag written.
- Modified tests to validate the new metrics structure and ensure correct behavior of the updated methods.
Update .gitignore and refactor metrics.py for improved logging and consistency
- Added coverage.xml to .gitignore to prevent tracking of coverage reports.
- Refactored metric labels in metrics.py for consistency in string formatting and improved readability.
- Enhanced logging messages in various activities to ensure uniformity in message formatting.
Update prediction_store_policy handling in workflows
- Added 'prediction_store_policy' to the input data handling in PredictionsBatch, ensuring a default value of 'lts:1' is used when not provided.
- Modified FormatAndExportPrediction to directly use 'prediction_store_policy' from input_data, removing the default fallback.
- Updated PredictionProcess to include 'prediction_store_policy' in the output data structure, ensuring consistency across workflows.
SIENTIAPDE-1214: Enhance MLFlow and tests with datetime index handling and logging improvements
- Added a new method in MLFlow to detect and parse datetime indices in DataFrames, ensuring proper format and raising errors for invalid types.
- Updated prediction workflows to utilize the new datetime index handling, improving data integrity during transformations.
- Enhanced logging in model_repository to include detailed data outputs for better traceability.
- Adjusted timeout settings in prediction workflows for improved execution time management.
- Updated tests.ipynb to include additional checks for index types and outputs for better validation of functionality.
SIENTIAPDE-1214: Refactor MLFlow and model repository methods to use model_config dictionary
- Updated MLFlow class methods to accept model_config instead of model_retention for improved flexibility.
- Modified model_repository methods to handle model_config, extracting necessary parameters for transformation and prediction.
- Adjusted predictions_batch and prediction_process workflows to utilize model_config for better configuration management.
- Commented out the previous sientia-mlops-library dependency in requirements.txt for clarity.
Remove all module docstrings and the versioning information from the Laborious package, activities, utils, and workflows. This cleanup enhances code readability and reduces unnecessary comments in the codebase.
Remove Docker configuration files and refactor project structure
- Deleted docker-compose.yml and Dockerfile as part of the project restructuring.
- Updated README.md to reflect changes in project setup and configuration.
- Introduced a new __init__.py file in the laborious package to provide an overview of the system.
- Enhanced documentation across various modules, including metrics, activities, and workflows, to improve clarity and usability.
- Added comprehensive docstrings and comments to key classes and methods for better maintainability.
Implement prediction store policy handling in Gates activity
- Added a new method `get_prediction_store_policy` to validate and parse the prediction store policy.
- Updated `format_prediction` method to utilize the new policy handling, allowing for sorting of predictions based on the specified policy.
- Enhanced test coverage for the new policy handling, including various scenarios for valid and invalid policies.
- Removed the obsolete `coverage.sh` script.
Update Gates activity and format_and_export_prediction workflow to use DATETIME_FORMAT_WITH_TZ for consistent timestamp handling
- Modified Gates activity to correctly handle the maximum timestamp without formatting it prematurely.
- Updated format_and_export_prediction workflow to utilize DATETIME_FORMAT_WITH_TZ for timestamp conversion.
- Enhanced tests to ensure timestamp conversion is applied consistently across workflows.
Update requirements and values for SIENTIAPDE-1193
- Bump sientia-dataops-library version from 1.4.1 to 1.4.2 in requirements.txt.
- Change GITHUB_BRANCH in values.yaml to reflect the new task SIENTIAPDE-1193 regarding datetime writing in temporal.
Update dependencies and refactor logging imports for observability
- Updated the sientia-dataops-library dependency version to 1.4.0 in requirements.txt.
- Changed image tag in values.yaml from 0.3.2 to 0.4.1.
- Refactored logging imports across multiple files to use the new observability module instead of the temporal.utils.logger.
- Updated retry policy imports in workflow files to reflect the new module structure.
Update dependencies, modify replica count, and implement metrics tracking
- Updated sientia-dataops-library version from 1.3.5 to 1.3.7 in requirements.txt.
- Changed replicaCount in values.yaml from 5 to 3 and incremented image tag from 0.2.7 to 0.3.1.
- Added Prometheus metrics tracking in gates.py and worker.py, including a new write_metrics method.
- Configured Prometheus service and ServiceMonitor in values.yaml for metrics collection.
Refactor OPC connection handling to improve error notifications and update GITHUB_BRANCH in values.yaml for MongoDB integration. Change requirements.txt to point to local dataops library path.
Refactor logging in MLFlow and Gates activities; remove print statement in FormatAndExportPrediction; update data handling in PredictionProcess; delete unused redis-feeder script.
